Trypanosoma brucei gambiense: TbgDal_VI3670
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Entry
TbgDal_VI3670 CDS
T06526
Name
(RefSeq) replication factor C, subunit 2, putative
KO
K10755
replication factor C subunit 2/4
Organism
tbg
Trypanosoma brucei gambiense
Pathway
tbg03030
DNA replication
tbg03410
Base excision repair
tbg03420
Nucleotide excision repair
tbg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TbgDal_VI3670
03410 Base excision repair
TbgDal_VI3670
03420 Nucleotide excision repair
TbgDal_VI3670
03430 Mismatch repair
TbgDal_VI3670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tbg03032
]
TbgDal_VI3670
03036 Chromosome and associated proteins [BR:
tbg03036
]
TbgDal_VI3670
03400 DNA repair and recombination proteins [BR:
tbg03400
]
TbgDal_VI3670
DNA replication proteins [BR:
tbg03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
TbgDal_VI3670
DNA Replication Termination Factors
ELG1-RFC complex
TbgDal_VI3670
Chromosome and associated proteins [BR:
tbg03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
TbgDal_VI3670
DNA repair and recombination proteins [BR:
tbg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
TbgDal_VI3670
Check point factors
HRAD17(Rad24)-RFC complex
TbgDal_VI3670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Rep_fac_C
DNA_pol3_delta2
RuvB_N
AAA_22
SLFN-g3_helicase
AAA_11
AAA_16
Rad17
RCF1-5-like_lid
AAA_30
AAA_14
AAA_5
AAA_2
AAA_19
ResIII
AAA_24
AAA_28
T2SSE
Viral_helicase1
ATPase_2
AAA_assoc_2
Mg_chelatase
NPHP3_N
AAA_33
AAA_3
DUF815
AAA_23
AAA_7
PspAA
TsaE
Motif
Other DBs
NCBI-GeneID:
23862024
NCBI-ProteinID:
XP_011774174
UniProt:
C9ZR59
LinkDB
All DBs
Position
6:complement(921141..922184)
Genome browser
AA seq
347 aa
AA seq
DB search
MLPDPPLKKHRVEPSVDLRPWIEKYRPKSLDEVKSQEEVVQALRSTLRQGASMPHFLFHG
PPGTGKTTAILAVAHELFGPDYIKSRVRELNASDDRGIQVIREKVKSFAQTAVGNVVQKV
QSDGKIYPVPPFKVIILDEADALLPDAQAALRRMMEDFSDVTRFCILCNYVTRIIDPIAS
RCAKYRFKPLIKEALYERISEVASRENIQISRSSIDALDHVSGGDLRLAIMYLQYAQRAN
GNDLQKEDFVEVSGSVPASMMQTYLAALMMKSFDEVRSVTKRLVQQGYPACQILAQLQDY
IVSAACPLNSAQRGSIALKLCDIEKRLSDGCDDFVQLLELGSFICSV
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgttgccagacccaccacttaaaaaacatcgtgtggagccgagtgttgatttacgccca
tggattgagaagtatcgaccaaagtctttggacgaggtcaagtcgcaggaggaagttgtg
caggcgttgcgttccaccctccgacagggcgcaagtatgcctcatttccttttccacggc
ccaccagggacgggaaaaacaactgccatacttgccgtcgcgcatgagttgtttggaccc
gattacattaagagtcgcgttcgtgagctgaacgcaagtgacgaccgtggtattcaggta
atacgtgagaaggttaagtcctttgcacaaacggctgtggggaatgtcgtgcagaaggtg
cagtccgacggaaagatttacccggtgcctcccttcaaagttatcatattggacgaagcg
gatgccctactacccgatgcgcaggctgcccttcgtcgtatgatggaggacttcagtgat
gttacacgattttgcattctctgtaactacgtaactcgcatcatcgatcccatagcgagc
cgttgtgccaagtaccgcttcaaacccctcataaaagaggccctatatgagcgtattagt
gaagttgccagtagagagaacatccaaatatcgaggtcttctatagatgcgttggatcat
gtgagtggcggtgacctacgcttagcgataatgtaccttcagtatgcgcagagggcaaat
ggaaatgacttgcagaaggaggattttgtggaagtgtcgggatccgtgcctgctagcatg
atgcaaacgtaccttgctgctttgatgatgaaaagcttcgacgaggtgcgcagtgtgaca
aaacgacttgttcagcaaggttaccccgcttgtcagatacttgcccagcttcaggattac
attgtcagtgctgcatgtcctcttaattccgctcagcgtggatcaattgcactaaagtta
tgcgacattgagaagcgtctgtcggatggatgtgatgattttgtgcagcttcttgaatta
ggaagtttcatatgctcagtgtaa
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