KEGG   Trypanosoma brucei gambiense: TbgDal_VI3670
Entry
TbgDal_VI3670     CDS       T06526                                 
Name
(RefSeq) replication factor C, subunit 2, putative
  KO
K10755  replication factor C subunit 2/4
Organism
tbg  Trypanosoma brucei gambiense
Pathway
tbg03030  DNA replication
tbg03410  Base excision repair
tbg03420  Nucleotide excision repair
tbg03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tbg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TbgDal_VI3670
   03410 Base excision repair
    TbgDal_VI3670
   03420 Nucleotide excision repair
    TbgDal_VI3670
   03430 Mismatch repair
    TbgDal_VI3670
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tbg03032]
    TbgDal_VI3670
   03036 Chromosome and associated proteins [BR:tbg03036]
    TbgDal_VI3670
   03400 DNA repair and recombination proteins [BR:tbg03400]
    TbgDal_VI3670
DNA replication proteins [BR:tbg03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    TbgDal_VI3670
  DNA Replication Termination Factors
   ELG1-RFC complex
    TbgDal_VI3670
Chromosome and associated proteins [BR:tbg03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    TbgDal_VI3670
DNA repair and recombination proteins [BR:tbg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     TbgDal_VI3670
  Check point factors
   HRAD17(Rad24)-RFC complex
    TbgDal_VI3670
SSDB
Motif
Pfam: AAA Rep_fac_C DNA_pol3_delta2 RuvB_N AAA_22 SLFN-g3_helicase AAA_11 AAA_16 Rad17 RCF1-5-like_lid AAA_30 AAA_14 AAA_5 AAA_2 AAA_19 ResIII AAA_24 AAA_28 T2SSE Viral_helicase1 ATPase_2 AAA_assoc_2 Mg_chelatase NPHP3_N AAA_33 AAA_3 DUF815 AAA_23 AAA_7 PspAA TsaE
Other DBs
NCBI-GeneID: 23862024
NCBI-ProteinID: XP_011774174
UniProt: C9ZR59
LinkDB
Position
6:complement(921141..922184)
AA seq 347 aa
MLPDPPLKKHRVEPSVDLRPWIEKYRPKSLDEVKSQEEVVQALRSTLRQGASMPHFLFHG
PPGTGKTTAILAVAHELFGPDYIKSRVRELNASDDRGIQVIREKVKSFAQTAVGNVVQKV
QSDGKIYPVPPFKVIILDEADALLPDAQAALRRMMEDFSDVTRFCILCNYVTRIIDPIAS
RCAKYRFKPLIKEALYERISEVASRENIQISRSSIDALDHVSGGDLRLAIMYLQYAQRAN
GNDLQKEDFVEVSGSVPASMMQTYLAALMMKSFDEVRSVTKRLVQQGYPACQILAQLQDY
IVSAACPLNSAQRGSIALKLCDIEKRLSDGCDDFVQLLELGSFICSV
NT seq 1044 nt   +upstreamnt  +downstreamnt
atgttgccagacccaccacttaaaaaacatcgtgtggagccgagtgttgatttacgccca
tggattgagaagtatcgaccaaagtctttggacgaggtcaagtcgcaggaggaagttgtg
caggcgttgcgttccaccctccgacagggcgcaagtatgcctcatttccttttccacggc
ccaccagggacgggaaaaacaactgccatacttgccgtcgcgcatgagttgtttggaccc
gattacattaagagtcgcgttcgtgagctgaacgcaagtgacgaccgtggtattcaggta
atacgtgagaaggttaagtcctttgcacaaacggctgtggggaatgtcgtgcagaaggtg
cagtccgacggaaagatttacccggtgcctcccttcaaagttatcatattggacgaagcg
gatgccctactacccgatgcgcaggctgcccttcgtcgtatgatggaggacttcagtgat
gttacacgattttgcattctctgtaactacgtaactcgcatcatcgatcccatagcgagc
cgttgtgccaagtaccgcttcaaacccctcataaaagaggccctatatgagcgtattagt
gaagttgccagtagagagaacatccaaatatcgaggtcttctatagatgcgttggatcat
gtgagtggcggtgacctacgcttagcgataatgtaccttcagtatgcgcagagggcaaat
ggaaatgacttgcagaaggaggattttgtggaagtgtcgggatccgtgcctgctagcatg
atgcaaacgtaccttgctgctttgatgatgaaaagcttcgacgaggtgcgcagtgtgaca
aaacgacttgttcagcaaggttaccccgcttgtcagatacttgcccagcttcaggattac
attgtcagtgctgcatgtcctcttaattccgctcagcgtggatcaattgcactaaagtta
tgcgacattgagaagcgtctgtcggatggatgtgatgattttgtgcagcttcttgaatta
ggaagtttcatatgctcagtgtaa

DBGET integrated database retrieval system