Trypanosoma brucei gambiense: TbgDal_VI4470
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Entry
TbgDal_VI4470 CDS
T06526
Name
(RefSeq) UV excision repair RAD23 protein, putative
KO
K10839
UV excision repair protein RAD23
Organism
tbg
Trypanosoma brucei gambiense
Pathway
tbg03420
Nucleotide excision repair
tbg04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
TbgDal_VI4470
09124 Replication and repair
03420 Nucleotide excision repair
TbgDal_VI4470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
tbg03051
]
TbgDal_VI4470
03400 DNA repair and recombination proteins [BR:
tbg03400
]
TbgDal_VI4470
Proteasome [BR:
tbg03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
TbgDal_VI4470
DNA repair and recombination proteins [BR:
tbg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
TbgDal_VI4470
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
ubiquitin
XPC-binding
Rad60-SLD
DUF3135
UBA_7
DUF6965
Motif
Other DBs
NCBI-GeneID:
23862113
NCBI-ProteinID:
XP_011774254
UniProt:
C9ZRD9
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All DBs
Position
6:1059355..1060425
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AA seq
356 aa
AA seq
DB search
MRIILKSVLGKKREHEVSPDTKVEDIKKFLESEYTPQSLRLCYNNRVLEDPMTMEQLGIG
EDTVIVYVGKKQSVQQLASKSGGCASPSAPAEGPAKGELNENPGVAGASSVPVDVPAPSP
SAQAPATTQQPSGPAPASLRSVDPALIDSIVAMGFNDREQVSLALRAAYMNADRAVEFLC
TGIPPHVQQQLAEADLQASAMGRAAVPSAGTPPSDAGSGGTQSDLRRALSAIPHIDDFRS
LLQNNPQAFSALAGQLLENFPQVGELAQQDPEEFARFMMAGSVPDNADQTLVTAGETEVD
DAQPLGEEDRAAVNRLVLLGEGAWGEREATEAYRMCGRREDAAAHFLLFNFLGITD
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgaggataattctcaagagcgtgctggggaagaagcgtgagcacgaagtaagcccagat
accaaggtagaggatataaagaagtttcttgagagcgaatacaccccacaaagtcttcga
ctgtgttacaataaccgcgttctggaggacccaatgaccatggaacagttgggcattgga
gaggacaccgttattgtgtatgtgggaaagaaacaatcggttcagcagttggcgtccaag
tcgggcgggtgtgcctcaccaagtgctcctgcagagggccccgcaaagggggaattaaac
gaaaaccctggagtcgctggtgcgagcagtgtaccggttgatgtgccggccccttcccct
agtgctcaagcaccggcgacaacacagcaaccctcaggtcccgcgcctgcgtctcttcgg
agtgttgatccagcccttatagattcaattgtcgcgatggggtttaacgaccgcgagcag
gtatctcttgcacttcgcgccgcctacatgaacgccgatcgggcggtggaatttttgtgc
acggggattcctccacatgtccagcagcaactcgcggaggcagatctccaggcaagtgcc
atgggtagagcagcggtgccgtcagcgggcacgccgccgtcggacgccgggtcgggtggt
actcagtcagaccttcggagggcgctgtcggcgattccccatattgatgatttccgttca
ctgctgcaaaacaaccctcaagcctttagcgcgctggccggccaactacttgaaaacttc
ccgcaagttggcgagcttgcgcagcaggacccggaggagtttgcaaggtttatgatggct
gggtcggtgccggataacgctgaccagacccttgtgactgctggtgagacggaagtggat
gatgctcaaccgttaggtgaggaagacagagctgcagttaatcgcctcgttttacttggt
gagggagcgtggggtgagcgtgaggcaactgaagcatatcgcatgtgcggacggagggaa
gatgcggcagcacattttcttcttttcaactttctcgggattaccgactga
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