KEGG   Trypanosoma brucei gambiense: TbgDal_VII1130
Entry
TbgDal_VII1130    CDS       T06526                                 
Name
(RefSeq) hypothetical protein, conserved
  KO
K12876  RNA-binding protein 8A
Organism
tbg  Trypanosoma brucei gambiense
Pathway
tbg03013  Nucleocytoplasmic transport
tbg03015  mRNA surveillance pathway
tbg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tbg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    TbgDal_VII1130
  09122 Translation
   03013 Nucleocytoplasmic transport
    TbgDal_VII1130
   03015 mRNA surveillance pathway
    TbgDal_VII1130
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tbg03019]
    TbgDal_VII1130
   03041 Spliceosome [BR:tbg03041]
    TbgDal_VII1130
Messenger RNA biogenesis [BR:tbg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     TbgDal_VII1130
Spliceosome [BR:tbg03041]
 Complex C
  Other components
   EJC/TREX
    TbgDal_VII1130
SSDB
Motif
Pfam: RRM_1 RRM_PARP14_3
Other DBs
NCBI-GeneID: 23862243
NCBI-ProteinID: XP_011774422
UniProt: C9ZS03
LinkDB
Position
7:<268619..>269098
AA seq 159 aa
MITEGAATPCAEVPAIRRVRRTRSRFERLVRPEDVAPGEPTPSVEGWVLFLTNLPPNTTM
DHITDLFVTREGEGLWNVREVKMPLDKNCECCGYALVELEKREAFEAALRDMEGMTLSFA
EGEPPNGEDAWRLHIAPTFLGEKDDEEEELVAGGKRERE
NT seq 480 nt   +upstreamnt  +downstreamnt
atgattacagagggcgccgctacaccctgtgccgaggtgccggcgattcgccgtgttcgg
cgaactcgttcacgctttgagcgtctcgtccgccctgaggatgtcgcccccggtgagcca
acccctagtgtggagggatgggtcctattcctcaccaacttaccacccaacaccacgatg
gaccacatcactgatctttttgttacgcgtgagggtgagggactctggaacgtgcgggaa
gtgaaaatgccccttgataaaaattgtgaatgttgcggttatgcactggtggaattggaa
aagcgcgaagccttcgaggccgcattgcgagatatggaaggaatgacgttgtccttcgct
gagggtgaaccaccaaacggcgaggacgcgtggcgtcttcacatagctccgacattcctc
ggcgagaaggacgacgaagaagaggagttggtggcgggaggaaaacgggagcgtgagtag

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