Trypanosoma brucei gambiense: TbgDal_VII1510
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Entry
TbgDal_VII1510 CDS
T06526
Name
(RefSeq) pseudouridylate synthase I, putative
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
tbg
Trypanosoma brucei gambiense
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tbg03016
]
TbgDal_VII1510
Enzymes [BR:
tbg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
TbgDal_VII1510
Transfer RNA biogenesis [BR:
tbg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
TbgDal_VII1510
Prokaryotic type
TbgDal_VII1510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
23862285
NCBI-ProteinID:
XP_011774460
UniProt:
C9ZS41
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Position
7:345799..347655
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AA seq
618 aa
AA seq
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MAKRKNFNTRRACLRKAPRDHTHIGLCVMYCGTAFRGLQLQAHAPTHHTVEGVLIQALKD
AGIVDGVQRGRVSGEEHHFARSCRTDRGVHAVRNLVCLFVPNSKLEAAGGCDRLPQLLNA
HLPSTVRVERVTTVMGDFIPRFCCVSRIYRYMIPVYALLSPCSSWNEFYAEFPQAVETLR
CRAQGGSFIDLCPNEEDKLLAALRDVVSRGNGLLAHHVVGTHRFHNFSVSPGERYGHGWN
RKVVMPNDNTSVRTVMRCEIAPRLFLFPQEAIGPTRSEYAKSLKIFEGDTAAEGERVVAV
SERTFPETALLPYLLFQIEGRSFLFNMIRKIVGLIIAVLRGARESLMQETLSAERHALCP
LAPDSFLYLFHSFYTSYDNRVRRSGSTRFCPLEDEWTGEVGEAASAFAVTSIAADVIDLD
MNRVPALGTLLSAIDAQRRVTRPCWEEEDAHLTSMKEFHPAVVEPHPSCSEMTTFLRSLR
VHNWGLSQVKQPVQCGKNKPLDTDNGKESITGCEGVKQQRASGDGYVVDEGQVRKRARKE
ECMCEGCNGTPFSRETHTLGEEEVDDGWLYVASTPEEEQRLRHEHHKRVRRSRAWDGTAH
DGGVEVAFHSDGDGGGSE
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggctaagcgtaagaattttaacacgcggagggcgtgtttgcgcaaagcccctagggac
catacacatattggactttgtgtgatgtactgtggcacggcgttccgaggactgcagttg
caggcgcacgcaccgactcaccatacggttgagggtgttttgattcaagcgttgaaagat
gccggtatcgtcgatggcgtacagcggggtcgtgtgagcggggaagagcatcattttgct
cgttcgtgccgtacagatcgcggtgtgcatgccgtgaggaatctcgtttgcttgtttgtg
ccgaacagcaaacttgaagctgccggtggttgcgacagactcccacagcttctaaacgca
catctcccctcaactgtgcgtgtggaacgcgtgacaaccgttatgggtgatttcatcccc
cgtttctgttgcgttagccgtatataccgttatatgatcccggtgtatgcccttttgtca
ccctgtagttcatggaatgaattttacgcagagttcccacaggctgtcgagacgctgcgg
tgccgtgctcaagggggctctttcatcgacctctgcccaaatgaagaggataaactactt
gctgcattgagagacgttgtgtctcgggggaatgggttgctcgctcatcatgtggtgggg
acccaccgttttcacaacttttcggtatccccaggggagcgatatggtcacggatggaac
aggaaggtggttatgcccaatgacaatacctcagtgcgtaccgttatgcgatgcgaaata
gcaccgcgcctgtttctgttcccgcaggaagccatcggaccgacccggtcagaatatgca
aaatcgctgaagatattcgaaggtgataccgctgcggaaggggaaagggtggtagcagtg
tctgagaggaccttccccgagacggcgcttctgccgtaccttctgtttcagattgagggc
aggtcattcctgttcaacatgatacgaaagattgttggtctcatcatcgctgtactgcgt
ggtgcgagggagtcgctcatgcaagaaaccctgtctgctgagcggcacgcgttgtgtccg
ctggcacccgactcgtttttgtacctttttcactctttctacacttcgtatgacaacaga
gtccgccgcagtgggagtacgcggttctgtccgctggaagatgagtggactggagaagtc
ggagaagctgcttccgcttttgcggtaacgagcattgcggcagatgttattgacctcgac
atgaaccgtgttcctgccctcggtacgcttcttagtgcgatagatgcacaacgacgtgtg
actcgcccctgttgggaggaagaagatgctcaccttacctcaatgaaagaatttcaccca
gctgttgtagagccccatccttcatgctcagaaatgaccacctttctgcggtcgttacgc
gtgcataactgggggttgtcgcaagtaaaacaacctgtccagtgcgggaaaaacaaaccc
ctcgacacggataatggaaaggaaagcatcactggctgcgaaggggtaaaacaacagcgc
gcttctggtgatggttatgtggtagatgaagggcaagtacggaagagagcgcgcaaggag
gagtgcatgtgtgaaggttgtaatggcacacccttcagccgggaaacccacacgttaggg
gaggaggaggttgatgacggttggctctacgtggcgtcaacgccggaggaggagcaacgt
ctgcggcatgagcatcacaaacgggtgcgccgctcacgagcgtgggatggtaccgcgcac
gacggtggtgtggaagttgcttttcatagtgatggtgatggcggcggaagcgagtga
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