Trypanosoma brucei gambiense: TbgDal_VII4210
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Entry
TbgDal_VII4210 CDS
T06526
Name
(RefSeq) poly(A) polymerase, putative
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
tbg
Trypanosoma brucei gambiense
Pathway
tbg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
TbgDal_VII4210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbg03019
]
TbgDal_VII4210
Enzymes [BR:
tbg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
TbgDal_VII4210
Messenger RNA biogenesis [BR:
tbg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
TbgDal_VII4210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
MTPAP-like_central
NTP_transf_2
DUF2204
Motif
Other DBs
NCBI-GeneID:
23862634
NCBI-ProteinID:
XP_011774775
UniProt:
C9ZSW0
LinkDB
All DBs
Position
7:complement(<1041113..>1043176)
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AA seq
687 aa
AA seq
DB search
MSRADKSFLAKKIISSDGPSPAEEDHNVPLVEWCAAGIEPEEEANRRRSVLEHINCIVRA
WIRSTMIAEFRMPAEAAAQVEGRIFATGSYRYNVHGSGSDIDIVLIAPNRITREHFFNTL
APRLSHESRITELHCIRDARVPLIAMVADGIDIDLSFGSIRQDRVPEVITDDLLQGLDDQ
SVLSCNAVRVAHNIMDLAPHKASFRQALRFIKAWGKARGIYSNTFGFPSGIGWAILVAFV
CQCHPNQNAAGMVVRFFRIYHTWFSPNPHGSGRENRAIYLTETMRVKTNLGRGWDPRESK
SDALALFPVLTPAVPYGNACYNVTMTNLRQLCDEFARGHEICSSYIGMGVEETKMKLGPH
GIWSKILEPVKFFGEYKYYLHVQVTCTDAEAYQGYVDAVESKIRFLWAGTAESRAQSLES
FPHVRLRLNPKGYEAPEEVEARSRLLKKAPRGGGIPEGGAQGRAGASSNGNSSSVSSAVG
GGSAGTAVKSFSRHYYFGMSVDSKAASMKVDLAPSIRSFHNIVRQLRQYRDGVTRLPVIT
VEDMTKIPAFVKAAAGYKDPVSTTESDAGSGRACTPSEADTATSSNGAAAATAGASEAAD
KSEGAPSAETPGVKRHRGEDDENDAAAMKVVAKDSVNSAIADHAGPKLGKGSAEGGGARR
DNSTGHSKVSQDDDEELGLEQALGLGF
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgagcagacaagtcgtttcttgcaaaaaagattatttccagcgacgggccgtct
ccagctgaggaggatcacaacgtaccgcttgtggagtggtgcgcagcgggaattgaacct
gaggaagaggcaaaccgtcgacgctccgttcttgaacacatcaattgcattgtgcgggcg
tggattcggtcaacaatgattgcagagtttcgcatgccggctgaagcggccgctcaagtg
gagggccgcattttcgcaacgggctcataccgctacaacgttcatggttcaggtagcgat
atagatattgtactaatagcccccaatcgcattacacgtgagcattttttcaatacgcta
gcccctcgattgagtcatgagtctcgcattaccgaacttcactgcattcgtgatgcccgc
gttcctctgatcgccatggttgcagacggaatcgatatcgacttgtccttcggttctatt
cgccaagatcgtgtccctgaagttatcacagacgacttacttcaggggcttgacgaccaa
tctgtgctcagctgtaatgctgtccgcgttgcacacaacatcatggaccttgctccgcac
aaagcttcatttcggcaggcgttgcgttttattaaggcatggggaaaggcgcgtggcatc
tacagtaacacctttggctttcccagtggtatcggttgggctattcttgttgcttttgtt
tgtcagtgtcacccaaaccaaaacgctgctggcatggtggtgcgcttcttccgtatctac
cacacatggttttcccccaatcctcacggaagcggaagggagaatcgtgcgatttattta
accgagacgatgcgcgtcaaaacgaacttgggtcgcggttgggacccgcgggaatcgaag
tccgacgcattagcgcttttccctgtgctcaccccagcagtgccatacgggaacgcttgt
tacaacgtgacgatgaccaatctgaggcaactatgtgatgagtttgctcgcggccatgag
atttgttcatcctacattgggatgggcgtagaggaaacgaaaatgaaactgggtccacat
ggcatctggagcaaaattcttgagcctgtgaagttctttggggaatataagtattacctg
cacgttcaggttacttgcacagatgcggaagcgtaccaaggctacgtggatgccgtggag
tcgaagatacgattcttatgggcgggaacagccgaatcgcgagcgcagtcacttgaaagt
tttccacatgtgcggctgcgtttgaacccgaaagggtacgaagcaccggaggaagttgag
gcgcgaagtcggttgctgaagaaggcgcctcgaggcggcggaataccggagggcggcgca
caggggcgtgcgggcgcttcttcaaatggtaatagtagctcggtatcttctgctgtaggc
gggggctctgctggcactgcggtgaaatcatttagtcgtcactactattttgggatgtct
gttgactcgaaagcggcatcaatgaaggttgaccttgctcccagtatacgctcattccac
aacattgtccgacagttgcggcagtacagggacggcgtcactcggttgcctgtgattact
gtcgaggacatgacaaagatacccgcctttgtaaaagcagccgctggctataaagatccc
gtgagtacaacggaatctgatgccggttccggtcgcgcctgtacaccatcggaggcagat
actgcgactagtagtaatggggctgccgctgctacggcaggggcgtcggaagctgcagac
aaaagtgaaggtgcacccagcgctgaaacgcccggagtcaagcgtcaccgcggggaagac
gatgaaaacgacgccgcagcgatgaaggtcgtagcgaaagactccgtaaactctgctatc
gcggaccatgcgggaccaaaattgggaaaaggcagtgcggagggtggtggtgctcgccgt
gataattcaactggccattctaaggtttcacaagatgacgatgaggagctggggttggag
caagcgctgggactcggtttttga
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