Trypanosoma brucei gambiense: TbgDal_VII4570
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Entry
TbgDal_VII4570 CDS
T06526
Name
(RefSeq) DNA excision repair protein, putative
KO
K10841
DNA excision repair protein ERCC-6
Organism
tbg
Trypanosoma brucei gambiense
Pathway
tbg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TbgDal_VII4570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tbg03036
]
TbgDal_VII4570
03400 DNA repair and recombination proteins [BR:
tbg03400
]
TbgDal_VII4570
Chromosome and associated proteins [BR:
tbg03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
TbgDal_VII4570
DNA repair and recombination proteins [BR:
tbg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
TbgDal_VII4570
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
23862681
NCBI-ProteinID:
XP_011774818
UniProt:
C9ZT03
LinkDB
All DBs
Position
7:<1140077..>1143457
Genome browser
AA seq
1126 aa
AA seq
DB search
MADELSQLGVNWVEESLLRQDVEANVEARADAAAAADEAELQKRWTALEEVERTVANIQE
QLSKVVAPVGTAAHKIVEEKDSASVLQFSLLKAQRELESRAKALRSWQIECEARQRRRVE
EAKQRKQVTEQEAVMARMRNRLSRALQPVADVQGLQEGVGSAGRVPASTNHHDYHDRLTT
GMGLTPQVWWNGRIGTPNGAASVTHSNISTPSRRQRLSSSTSADVPLTPAQYSCGPVLPS
AYRVTLTPSDVRSKLQKYADDSDLSIYSARCRKRKRLEGALAGLAALEAGVATANGEIKE
EDTDEDSGVVVKCEGSGMSSFPKVKTEGSAHEKSGASLLDAIDVDALMEESDDAAVEVLQ
KVKKEKRASAGGRKHRERENTTQNFTDRHDSIEVLRGISLASSIYQKLFDHQRDGLKWLL
NLHRQHVGGILGDDMGLGKTIQIAAMLNALNHSNQLRGPSLIVTPVTVLRQWVAEMHRWA
PYVRTCVMHASSASTISREKLIDSVRGTPAVLLTTYAAVREHCRLLHNACFQYVILDEGH
KISNPEATVTIAAKSFPTPHRLILSGTPVQNTLKELWCLFDFVKPGLLGTLRRFEEEFEV
PINASKNIRASPLALATAAETARVLHESISPFLLRRLKKQVMSDSLPEKYERVIRCPLSD
SQLEAYVDLLSSSRVQRLMSNTLSYTQLMGGLDRDGRDASGCLHIAGKRFQLMRDKENKG
VVRHELFCVMHELRQICNHVDIFHMRQAKDFNYTDDMENNFFLDVVNAPTATARKAGGKG
TTHFSMRSNRPVNYEGSSKLQTLRQLLKLWQRGGQRALVFSQTRAMLDIIENMCEQESLT
YIRMDGTTNSLRRQELMDRFNEDDRIVVALLTTRVGGVGVNLIGADRVVIFDPDWNPVTD
EQARERAWRIGQTRDVGVYRLISSGTVEEAVLRRQLAKTYVTEKVLHDPKLQRFFYEQGS
LSESFYLGVEYDSRVPLGKKHIVAAQELFPLLKEEHNNEEVFALTAVGHQRRIRGTEEES
GGASVRAKSETEKTAAASVYRVCAPRELFPSATTTSRTSSSNMSETSLLQDLVDGNHVRI
SGVDSTAQRLACTSASHAMLRVSNVIRTFEHQTQEAFARLPRVEGS
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgaactctcccagttgggtgtgaattgggtagaggaatctttgctccgtcaa
gatgtagaggcgaatgtggaggcacgagctgatgccgccgcagctgcggatgaggctgag
ctgcaaaagcgatggacagcactggaggaggtggagcgcacagtggctaatattcaagag
caactttccaaagtcgttgctcctgtgggcacggcagctcacaaaatagtcgaggagaag
gacagcgcttccgtgctacagttctccctgctgaaggcacaaagagagttggaaagtcgt
gcgaaagcgctccgcagttggcagatcgaatgcgaggcacgccaacggcggcgtgtggaa
gaggcgaaacagcgtaagcaagtgactgagcaggaggcagttatggccagaatgcggaat
cgtttgagtcgtgcccttcagccggtagcggacgttcaaggactacaagagggcgtaggg
agtgcggggagggttcccgcatcgactaaccatcacgattaccacgatcgcctcaccacg
ggcatgggcttgacacctcaggtgtggtggaatgggagaataggcacacctaatggagct
gcaagtgtgactcactcgaacatttcaacgccttcgcgacgtcaacgcctgtcatcgtca
acttctgccgatgtcccattaactcctgcacagtattcctgcggccccgttcttccatca
gcttatcgagtgacgctgacgccaagcgatgtccgctccaagttgcagaaatacgcagat
gacagcgacttaagcatttacagcgcgaggtgccgcaagcggaagcggctagaaggagct
ttagcgggtctagcagcgttagaagctggagtggccactgccaacggcgagatcaaggag
gaggataccgatgaagactcgggggttgtggtgaagtgtgagggtagtggcatgagtagt
ttccccaaagtgaagacagagggtagcgcacatgagaaaagtggagcctcattgctggat
gccatagatgtcgatgcgctcatggaggagtctgatgatgcggctgttgaagtgctccaa
aaagttaagaaggaaaaaagggcatcagcaggcggtagaaagcaccgggagagggaaaat
accacgcaaaactttacggacaggcatgattccattgaagtcttgcgtggtatttctttg
gcatcatccatttatcaaaaattgttcgaccaccaacgggacggattgaagtggctgctg
aatcttcaccgacagcatgtcggtgggattctgggagatgacatgggactcgggaaaact
attcaaatagcagccatgttaaatgccctaaatcattccaaccaacttcgtggaccctct
ctaattgttacaccggtcacagtgctccgtcagtgggtggcagagatgcaccgatgggct
ccatacgtgcgtacctgtgttatgcatgccagtagtgcttccactatttctcgcgaaaag
ctcattgattcggttcgaggcactccagcagtgctcttaacaacctatgcggccgttcgt
gagcactgccggttgcttcacaacgcatgttttcagtatgttattcttgacgaggggcac
aagattagcaacccggaggctactgtcacaattgctgccaagtcgtttcccacaccccac
cggctcatcctctctggaacccctgtgcaaaatacactcaaggaactgtggtgcctgttt
gacttcgttaaaccaggcctactgggtacgttgcggaggttcgaggaagagtttgaggtg
ccaatcaacgccagtaagaatattcgggcgtcacctctcgctttggccacagccgccgag
actgcgcgggtgctgcacgagagcatctccccgtttttactacgtcgactgaagaagcaa
gtgatgagcgattctttaccggagaaatacgaacgggttattcggtgcccactcagtgat
tcccaattagaggcgtatgttgacctcttaagttcatcacgcgtgcagaggttgatgagt
aacaccctgtcatacacccagttaatgggtgggttggaccgtgacgggcgggatgcaagt
ggttgtctgcacatcgctggcaagcggttccagttgatgcgtgataaagaaaacaaaggc
gttgttcggcatgagctgttttgcgtgatgcacgagttgcgacaaatatgcaatcacgtg
gatatctttcacatgcgacaagcaaaggacttcaactacaccgacgatatggaaaacaac
ttctttctcgatgttgtgaatgcccctaccgccactgcaaggaaagcgggtggaaaaggc
acgacacatttttcgatgcgcagtaacaggccggtaaattatgaaggtagcagtaaactt
caaactcttagacagctgctgaagttgtggcaacggggtggacagcgtgcgctggtcttc
tcccagacgcgtgccatgctagatattattgaaaatatgtgtgaacaagagagccttaca
tatatccgcatggatggtaccaccaatagcttacgacggcaggaactcatggatcgtttc
aacgaggatgacagaatcgtggtggcgctgcttaccacacgtgtgggtggcgttggggtg
aacttaattggtgctgaccgagttgtgatatttgaccctgactggaatccggtgacggat
gagcaggcgcgtgagcgggcgtggcgaattgggcaaacacgcgatgtgggtgtttatcgt
ctcatttctagcggaacagtggaggaggcggtgttgcgacggcaacttgccaagacgtat
gtgaccgagaaagttctgcacgatccaaaacttcaacgtttcttctacgagcaaggtagt
ctatcagagtcgttctaccttggcgtcgagtatgacagccgggtgccactagggaagaag
cacatcgtcgctgcacaagaactgtttccacttttaaaggaagaacacaataatgaggaa
gtatttgcgctaacagcggttgggcatcagcggagaatccgagggactgaggaagaatca
ggtggggcttctgtgagggcgaagtcagaaacagaaaaaactgctgctgcttccgtgtat
cgggtatgtgctccacgggagctttttccttctgccaccacaacgtcacgaacatcttct
tccaacatgtctgagacgtcattgcttcaggatctcgttgacggcaatcatgtgcggatc
tctggtgttgacagcacagcacagcgactcgcgtgtacgtcagcgtcccatgcaatgttg
cgtgtgtcgaatgtcatccgcacgttcgaacatcagacacaagaggcatttgcgaggctt
cccagggtggagggatcgtaa
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