KEGG   Trypanosoma brucei gambiense: TbgDal_VII4750
Entry
TbgDal_VII4750    CDS       T06526                                 
Name
(RefSeq) hypothetical protein, conserved
  KO
K14556  U3 small nucleolar RNA-associated protein 12
Organism
tbg  Trypanosoma brucei gambiense
Pathway
tbg03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:tbg00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    TbgDal_VII4750
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tbg03009]
    TbgDal_VII4750
Ribosome biogenesis [BR:tbg03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    TbgDal_VII4750
SSDB
Motif
Pfam: Beta-prop_WDR3_2nd Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_IFT122_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st WDR55 Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_EML Beta-prop_WDR75_1st WD40_Gbeta Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd DSE1_N ASA1 Beta-prop_Aladin Utp12 PEP5_VPS11_N Beta-prop_WDR41 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_DCAF12 WDR90_beta-prop_4th Beta-prop_VPS8 CFAP251_N TRM82_WD WD40_RFWD3 Beta-prop_SPT8 Beta-prop_ACSF4 Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 23862702
NCBI-ProteinID: XP_011774837
UniProt: C9ZT22
LinkDB
Position
7:<1183716..>1187048
AA seq 1110 aa
MKVGFMVGKTYLRYVVGPQGGAVASNGSLSCYSSITRPSYAKSTGVAKTTYSERNNRNQG
RDKSSTAASAVIFTASLEAVRVYSLRSGVLQHTLIPREGKMPLEVTALRVVPLDMVGTST
ASSTPLNTLNQIEQEGWMLLVGYHNGHVAVFSCGPTSNYGEPVCRFYALGHKIDTSVLSV
AIDSQRACLCSGGQDTDLTVWDVVTQEPSFRLRGHRGGIVGVEFVPQRRPRGRLVVVTGS
SDGLIKVWELSIRQCLQTIVASDTQVSSILIDATGSRLYCGLRESQLKVFNTEELTASSE
MDKELGAVTEHGGVPRKHQKPITSFSFSYDGNFLLACTSKTVEIFRILSRDDVRRKVARK
RKRREAKNSGNAPLNDVAEDDGDEPNAPGDEDRIEEKLPPTRITTDGKSEANDAGSKSTH
SAHATAMEEMALLRTFFLDEKVRSACFVPPFPGISGGRGSGSPGQLHIAVTFNNNTVRTF
TTALTCGDPPAAAMWSLENLSMRHTMDYSGHQSDIRSLQFVDDDTALLSLSSEKLMMWNI
STKDPEEDHRNEHDFYDAVEANVKRGDKTGSLTCTSQVALDDAVAVAAIASNLCCVGRKD
GSVLLVDLPAAETVFTDTAVHVGGVRHVTPLPDKSGFVSVGADRRMIVWTLAMVKVGSDA
ASSGSGSQAASHRHKNSSPDTPEPTDENGNGETDTKNMSLQLLQSAQLELTESPLFAACS
ADGRFLAVGLQNTNIQLFFADTMKPYLSLYGHKLPPTAATFSTDGTLIASCGMDKALRLW
GTDFGDCHRSIHAHDDYVTDVAFLRDTHQLLTVSLDGTLKHWDGDNWIMIQMFRQHQRGV
WAVAATANSTCVATAGVDKCIRCFLRTSDIVFPAEEEERLAQEAMDEEAAKRAAMQSLNG
IQHQQEVGVAGHATTATAAAAEKIMEALDLVSVELQRRKNDSDSAPPNPLLVNKTVWEYL
WSIIESVRPSDLRHALSNLTSTHVDALLDYVEQMLKERAVLNYETAARILLALVGTPASV
ATTHIARVAVAGEVSEARGARRLAALRRMIAEGLDQSATRMDYNVSGLQFVRKILEDSEK
ARFFDVSKVQGYKQRYHSRVLHEEQRGEKH
NT seq 3333 nt   +upstreamnt  +downstreamnt
atgaaggtaggattcatggttgggaagacgtatcttcggtatgttgtgggcccacagggt
ggtgctgtcgcgagcaatggttccctttcatgttacagcagtatcacgcgtccgtcgtat
gccaaatcaacgggagtggcgaagacaacttacagtgaacgcaataaccgaaatcagggg
agggataagtcctcaaccgcggcttctgctgtgattttcactgcaagtctggaggctgtg
cgggtgtactctctgcgcagcggtgtgcttcaacatacgttaatacctagggaaggaaaa
atgccgttggaagttaccgccctccgtgttgtaccactggatatggtcggaacatcaaca
gcgtcgtcaacgccactgaataccctcaatcaaattgagcaagaaggatggatgctgttg
gtcggataccacaacgggcacgtggcagttttttcgtgtggtccgacatcgaattacggg
gaaccagtttgccgtttctacgccctcggtcacaagatagatacatcagttctatccgtt
gccatagactcgcagcgcgcttgcctttgtagcgggggacaagataccgatcttaccgtg
tgggatgttgtgactcaagagccctcttttcggttgcgtgggcatcggggaggtattgtc
ggtgtggagttcgtaccacaacgacgcccaagaggccgtttagtagttgtcacgggctca
tcggatggtctgattaaagtgtgggaactatccatacgtcagtgcttgcagacaattgtc
gcatcggatacacaagtgtcgtctatactaattgatgctaccggtagtcggctgtactgt
ggcctccgcgaaagtcaactgaaggtgttcaatacggaagagctcactgcatcaagtgaa
atggacaaggaattgggtgccgtcacagagcacggaggtgttccgcgcaaacaccagaag
ccaataacttctttttccttttcatatgacggcaactttctcttggcgtgcacaagcaaa
actgtggaaatctttcgtattctgtcccgcgacgatgtgcgacggaaggttgcgcggaaa
cgtaagcgtcgggaggcaaagaatagcggtaatgccccattgaacgatgtggcagaggat
gatggagacgagcccaacgccccgggtgatgaggatagaattgaggagaagttgccaccg
acgagaataaccactgatggcaaaagtgaggctaatgacgcgggtagcaaaagcacgcat
tctgcccacgctacagccatggaagagatggccttgttacgcactttctttcttgacgag
aaggtgcgtagtgcttgtttcgttcctcctttcccaggcataagcggtggcagaggtagt
ggtagtcctggccagctccacatcgctgtaacgtttaacaacaatacagtgcgcacattc
actactgcgctgacatgcggcgaccccccagctgctgctatgtggtcgctcgagaacctt
tcgatgcgccatacgatggattacagcggacaccagtctgacattcgctcgttgcagttt
gtcgacgacgacacggcgttgctttcgttaagctctgaaaagctgatgatgtggaacatc
tccacgaaagacccggaagaggatcacagaaacgagcacgatttctatgatgccgtagag
gcaaatgtgaagcggggtgataaaacagggtcgctcacatgtacatctcaggtcgcgctt
gacgatgccgttgctgttgccgccatcgcctcaaacctgtgctgtgtagggcgtaaagat
gggtccgtattgttggttgaccttcccgcggcggaaacagtgttcacagacactgcagtg
catgttggtggtgtgcggcatgttactccactccccgataaaagtggtttcgtttctgtt
ggtgctgaccgtcgcatgatcgtttggactcttgctatggtgaaggttggctccgatgcc
gcctcttctggttctggctctcaagcagcgtctcaccgccataaaaactcatcccccgat
actccagaaccaaccgatgaaaacgggaatggagagaccgatacaaagaatatgtcactt
cagttactgcaaagcgcacaactcgagttaacggagagtcctttgttcgctgcgtgtagt
gccgacgggcggttcctcgcggtcgggttacaaaacacaaacattcagctgttctttgct
gacacaatgaagccgtacctttccctctacggtcataaacttccacctaccgcggcaacg
ttcagcactgacggtactctcattgcctcttgtggcatggacaaagctctgcgactgtgg
gggacggactttggtgattgccatcgttctattcatgctcacgatgactacgtgacggac
gttgcttttttgcgggatactcaccaacttttaactgtttcacttgacggtacactcaaa
cattgggacggtgataactggataatgatccaaatgttccgtcagcaccaacggggtgtg
tgggcggttgcggcgacggcaaatagcacatgtgttgcgacagcgggagttgacaaatgc
attcgctgtttcttacgcacctctgacattgtcttcccagcggaggaagaagaacggtta
gctcaggaggcgatggatgaggaggcagcaaagcgagcagcgatgcagagtttaaatggc
atccaacaccagcaggaagtgggtgtggcgggtcatgcgactacggcaactgccgctgcc
gcggaaaagataatggaagcgctcgatttggtgtcagtggagctacaacgacggaagaac
gactcggatagtgctcccccaaacccgcttctggtgaacaaaaccgtctgggaatatctc
tggtccatcatagaaagtgtgcgacccagtgacttgcgtcacgcgctgtccaacctcacg
agcacacatgttgatgccttgctggactacgtcgagcagatgctgaaggaacgggccgtg
cttaactatgagaccgctgcgagaattctgctcgctttggttggcacaccggcttcggtg
gcaacaactcacatcgctcgcgtagccgttgcaggtgaagtgtccgaggcgcgtggggca
cgccgtctagccgccctccgccgaatgattgctgaaggcctcgatcaatcagcaacgcgc
atggactataacgtttccggcttgcagtttgttcgtaagatactcgaagacagcgagaag
gctcgcttcttcgacgtgagcaaagtccaggggtacaaacaaaggtatcacagtcgtgtc
ctccatgaagagcaaagaggtgagaagcattaa

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