Trypanosoma brucei gambiense: TbgDal_VIII1640
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Entry
TbgDal_VIII1640 CDS
T06526
Name
(RefSeq) hypothetical protein, conserved
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
tbg
Trypanosoma brucei gambiense
Pathway
tbg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
TbgDal_VIII1640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tbg03009
]
TbgDal_VIII1640
Ribosome biogenesis [BR:
tbg03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
TbgDal_VIII1640
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP15_C
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_IFT122_1st
WDR55
WD40_CDC20-Fz
WD40_Gbeta
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR41
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_SCAP
Beta-prop_EML
PAC11
DSE1_N
WD40_MABP1-WDR62_2nd
Beta-prop_NOL10_N
Beta-prop_Vps41
Beta-prop_RSE1_2nd
Motif
Other DBs
NCBI-GeneID:
23863327
NCBI-ProteinID:
XP_011775491
UniProt:
C9ZUX6
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Position
8:<483620..>485053
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AA seq
477 aa
AA seq
DB search
MQNKSWALPIKQVPVVEKLDRSIVWNNVRLCYEQKLFGQISCIRYNNAGTVVGCASTNQL
SLLRVPQTEGVITNEQRERKCFSLRFRDDDKMTIMSVDQRVVIRSTETLFERQFPGHVRE
VRDALFLDRRSFVSGSDDTTIKLWDVMGECELAVGKAHTDYVRCLENRSPGCFFSGSYDH
VINLWDTRAGFSCPTQTSGQAVPNPVESLLCLDTNLLVCGASDQIILFDIRKGLSLPLTQ
DSYHTKTVVALGYSKKYNVLLSGSLDQRVKIFSLERGCPDPVASKKFDAPVTAVAVHPRS
SEFAVGTASGDLRIMKLGSASDGDEMGGGKDEESRGRPKDEGLIAMKVNDVRRQLVSYQY
NRALKTALYSRHADVVVSTLEELLRRGALHVALSGQNDRTIARILRFALGFIDTPQFSES
MMVVLDTIFDIYGTCVGKSIFLHRELMKAHRRLGSVLANLQRMAGTLSIMELIVNDV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaataagtcttgggccctgcctatcaaacaagttcctgttgtggagaagcttgac
cggtctattgtgtggaacaatgttcgcttatgctatgagcaaaagcttttcggtcagatc
tcgtgcattcggtacaacaatgctgggacagtcgttggttgtgcctctacaaaccagctc
tcccttttacgagtaccccagacagagggcgtgattactaacgaacagcgcgagaggaaa
tgtttctcgcttcggttcagggatgacgacaaaatgactattatgtctgttgaccaacgt
gttgttattcggtcaaccgaaacgctgttcgaacggcagtttcctggccatgttagggag
gtacgagacgctctttttcttgatcgccgcagctttgtgtctggaagtgatgacacaact
ataaaactctgggatgttatgggcgagtgtgaactagctgtgggaaaagctcacaccgac
tacgtgcgttgtctcgaaaaccgctcaccgggctgcttcttcagtggctcttatgaccac
gttatcaacttgtgggacacacgggctgggttttcgtgcccgactcagacaagcggccaa
gcagttccgaaccctgtcgagtcattactttgcttggacaccaacctactggtttgtggc
gcgtccgaccaaataatactattcgatatccgaaaaggtctttcgttgcctcttactcag
gattcttaccatacaaagaccgtggttgcgcttggctactccaaaaaatacaacgtgctt
ctcagtgggtcactcgatcaacgagtgaaaatattttccctagagagaggatgcccggac
cctgttgccagtaaaaagtttgacgctccggtaaccgcggtggcggttcaccctcgttcg
tccgaatttgctgtgggcacggcgagcggcgaccttcgtatcatgaaactgggaagcgct
tctgatggagacgagatgggtggtgggaaagacgaggaaagtagggggcgcccaaaagat
gaggggctcatagctatgaaagtaaatgatgtgcgtcgtcagcttgtatcctatcagtac
aaccgggcattgaagactgcgctttactctcgtcatgccgacgtcgtggtttccactctt
gaagaacttcttcgccgcggggcgttgcacgtggcattgagtggtcaaaatgatagaacg
atagcgcgcatccttcgttttgcgctcggttttattgacaccccacaattctctgagtca
atgatggtcgtgttggacacgatcttcgatatctatggaacgtgcgtgggcaaaagtata
tttttgcatagggaactgatgaaggcccatcgccggctcggcagtgtccttgcaaacctc
caaagaatggcgggcacactgagtataatggagttaatagtaaatgacgtatga
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