Trypanosoma brucei gambiense: TbgDal_VIII310
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Entry
TbgDal_VIII310 CDS
T06526
Name
(RefSeq) DNA repair and recombination helicase protein PIF1, putative
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
tbg
Trypanosoma brucei gambiense
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tbg03032
]
TbgDal_VIII310
03029 Mitochondrial biogenesis [BR:
tbg03029
]
TbgDal_VIII310
Enzymes [BR:
tbg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
TbgDal_VIII310
DNA replication proteins [BR:
tbg03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
TbgDal_VIII310
Mitochondrial biogenesis [BR:
tbg03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
TbgDal_VIII310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_19
AAA_30
Herpes_Helicase
AAA_22
Pif1_2B_dom
AAA_16
Viral_helicase1
AAA_7
UvrD_C_2
DEAD
AAA_5
AAA_29
DUF6079
AAA_24
T2SSE
AFG1_ATPase
ABC_tran
Parvo_NS1
NACHT
ORC-CDC6-like
AAA
Motif
Other DBs
NCBI-GeneID:
23863491
NCBI-ProteinID:
XP_011775355
UniProt:
C9ZUJ0
LinkDB
All DBs
Position
8:complement(74519..77497)
Genome browser
AA seq
992 aa
AA seq
DB search
MWDGPLRSRQNLRTVAKLRSSGCPLTQSAIHPTTTSPSEGETASEILQGQASAGYIEEQQ
LPATSSQLEMSGDSNAASDNNVVIMTKRQRDDLSQASQAEVLSRLRTEDAQGPAENNGAQ
SDLALHSCDMEERVDSSKLNLNHVTVNKHSPPASKSAGISQQNDDGGCGASENVNNTTTA
ASKQRGKLLLDSSSSNCTPKQQAQQAVTQVPEWELSHEQERIFDIVVNHRRSVFLTGGAG
TGKSHLLRAIIAALPLSTTFVTATTGLAALNLGGTTLHSFSGCGFVDQHTSTHQMVYRNV
LGRKKARANWRKCRVLVVDEVSMLDAWFFDMLEYVARHIRGCRKPFGGIQLVLSGDFLQL
PPVNKHSPKQETRLCFEAKSWPRVNPLVCTLSHQFRQKDKEFFSLLNEVRVGALTAPSLG
LLSSLSVITTVSFVDEEKLKLKREVGAEAVDIITDSKGRTRRQRQDGFTILRARRSEVDA
INTEKFGELDTEIYSYKGAHRGEGHFPSDLPSTVSVRAGCRVMLLANLDLSAGLANGSIG
TVESFVSSKLHQTANPSTKDDLQHLADHMMLPVVRFDHKGKQGPGDGGGAAAGRLVVIEP
HRWTMRQGDSDVSCSIQIPLQLAYAITIHKSQGMSLSHVNVDFAGIFEEGQAYVALSRCT
DVANLVIENFDAQRVNPNIKALAYYRALEFVGTEHREAEKKLIDNGNKMNPWGPYDVEDF
EASDDDNGGAVKKEVVENLTYDAENISCMVEQFRQRYMPQYIMFSTLRRRVLSNTEDAAR
VKGALLVMDTTSLLALTNMTGPTSLYQTIFTERGNMMRVPRVVKEELLFLASTDVKEVSS
VTTPTLHSFCSTCSSTPCSTGFSYDFVEVVSCALSIMENAKCDFLLDEQREGEANSLPPV
IQEWRSLSPLLMLNSSPDTGEKDAPSVIGFGERSREQHHSTLMFASFLVSRYSGNGAVYV
CTETVELAARALAIGLRVCSIAYLCNRPRRVN
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgtgggatgggccgctacgaagtcgccagaacctgcgtacagttgcgaagcttcggtcg
tctggttgtcccctcacccaatctgccatacatcccacaactacttccccttccgagggg
gaaaccgcatctgaaattcttcaaggtcaggcgtctgctggttatatcgaagagcaacag
ttacctgccaccagctctcagttggagatgagcggtgacagcaacgcagccagtgacaac
aatgtggttattatgacgaagcggcaacgtgacgacttgtctcaagctagccaggctgag
gttctgtctcgtttgcgcacggaagatgctcaagggcccgcagaaaacaacggagcacaa
tctgatttggcgttgcattcctgcgacatggaagagcgagttgattctagtaaactgaac
ctgaatcacgttaccgttaataagcattctccaccagcatcgaaatccgccggaatttcg
cagcagaacgatgatgggggatgcggagcttcggagaacgtcaacaacaccaccactgca
gcgtcgaaacagagaggaaagcttttacttgactcgtcttcgtctaattgcaccccaaaa
caacaggcccaacaagctgtcacacaagtgccggaatgggagctgtctcacgaacaagag
cgtatctttgatattgtcgtaaaccaccgccgctccgtatttcttactggtggtgcaggt
acgggcaagtcccacctccttcgtgcaatcattgctgcactaccactttccaccaccttc
gtcaccgcaacgaccgggttagcggcacttaatttgggtgggacgacactgcacagtttt
tcaggatgtggcttcgttgaccaacataccagcacacatcaaatggtatatagaaatgtt
cttggacgaaagaaagctagggctaattggagaaagtgccgcgtgctcgttgtggatgag
gtatctatgttggatgcatggttctttgacatgttggagtacgtcgcacggcacattcga
gggtgtcgaaagccctttggtggtattcagttggtgctatccggtgattttctgcagctt
ccaccggtaaataagcacagccctaaacaagaaactcgcctgtgttttgaagcgaagtca
tggccccgcgtcaacccgctggtgtgcacgttgtctcatcaattcaggcagaaggataag
gaattcttctcgcttcttaacgaagttcgtgttggcgccctaactgccccgtctcttggg
ttgttaagctcattatcggtcattaccactgtatcgtttgtcgatgaggagaaactgaag
ttgaaacgggaggtaggagctgaagctgttgacattattacggacagtaagggtagaaca
cgacgacaacgtcaggatggtttcaccatcttgcgtgcgcgccgttctgaggttgatgcc
ataaacacagaaaagtttggtgaactcgacacagagatttacagctacaagggggcgcac
cgtggcgagggtcatttcccatctgacttgccttccacggtatccgtgcgagctggttgc
cgcgtgatgcttctagctaacctggatcttagtgccggtctggcgaatggtagtattgga
accgtcgaaagtttcgttagcagcaaattacatcagaccgcaaatccttcgacgaaggat
gacttgcaacatttggctgaccacatgatgctaccagtagttcgcttcgatcacaaaggt
aagcaggggccaggagatggtggtggtgcggctgctggtcggttggtggtaattgaacca
catcgatggacaatgcgtcaaggcgactctgatgttagttgcagcattcagattcctctt
cagttggcgtatgctattactatacacaagtcacagggcatgtctctttcgcatgtgaat
gttgacttcgccggtatttttgaggagggacaagcatatgtggccctttcacggtgtact
gacgtggcgaacctggtgattgaaaacttcgacgcccagcgggtgaatcccaacatcaag
gcattagcatactacagggcactggagtttgtcggcaccgagcatagggaggcagaaaaa
aaacttatcgacaacggaaacaaaatgaatccttggggtccatacgatgttgaggatttc
gaagcctcggatgatgataacggaggtgcggtcaagaaagaggtcgtggaaaaccttacc
tatgacgctgaaaatatttcttgcatggtagagcaattccgccagagatacatgccgcaa
tacattatgttttcaactctgcgccgacgagtcctgtccaacacggaagatgcggcacgc
gtaaagggtgcgttgttagtaatggacacgacgtcgctactagcgttaactaacatgacg
ggtcccacatcattgtatcaaacaatatttactgaacgcgggaacatgatgagagttccg
cgagtggtgaaggaagaactactgttcttggcgtcgacggatgttaaggaagtgagcagc
gttacgacgccaacacttcatagtttctgcagcacttgctctagcactccatgttcgact
ggttttagctatgattttgttgaagtagtgagctgtgctcttagcattatggaaaatgca
aaatgtgactttcttttggatgaacagcgtgagggcgaggctaattcgcttccgccggtg
atccaagaatggaggtcactgtctccactactaatgctaaactcgtcccctgatacgggt
gaaaaggatgctccgagtgtgatcggattcggcgagcgctctcgagagcagcatcactcc
acattaatgtttgcttctttccttgtaagcaggtatagcggaaacggcgcggtatacgtt
tgcacggaaaccgttgagctcgcggcgcgggcattagccattgggttgcgcgtctgttcg
atcgcgtatttatgcaatcgcccccgaagggtgaactga
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