Trypanosoma brucei gambiense: TbgDal_VIII3250
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Entry
TbgDal_VIII3250 CDS
T06526
Name
(RefSeq) DNA repair and recombination helicase protein PIF1, putative
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
tbg
Trypanosoma brucei gambiense
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tbg03032
]
TbgDal_VIII3250
03029 Mitochondrial biogenesis [BR:
tbg03029
]
TbgDal_VIII3250
Enzymes [BR:
tbg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
TbgDal_VIII3250
DNA replication proteins [BR:
tbg03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
TbgDal_VIII3250
Mitochondrial biogenesis [BR:
tbg03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
TbgDal_VIII3250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_19
AAA_30
AAA_22
Pif1_2B_dom
Viral_helicase1
Herpes_Helicase
DEAD
AAA_16
nSTAND3
ATPase_2
NPHP3_N
SLFN-g3_helicase
nSTAND_NTPase5
TrwB_AAD_bind
UvrD_C_2
P-loop_TraG
AAA_11
T2SSE
UvrD-helicase
NACHT
AAA_5
Mg_chelatase
ATPase
AAA_29
ATP-synt_ab
nSTAND6
Motif
Other DBs
NCBI-GeneID:
23863508
NCBI-ProteinID:
XP_011775654
UniProt:
C9ZVD9
LinkDB
All DBs
Position
8:complement(<865221..>868004)
Genome browser
AA seq
927 aa
AA seq
DB search
MLSRLSAVWRPSRVALRIQRVDFTTCGNRLNRSTQPNEPPLVSGIAARSRTAKAEPVEKR
GRAAIKIDSPPPPLEPPRISEEHMTRRRKVGGGKTKAAAVTKSKQRRSGRTVGASAFNTA
RRANGIEGSAPGKGGASDVAIDDDDDEKLVDEESKQLMQLLKEEALRREEEKKKRLRAKA
AAEATEVTDDKEYLSKLGVAERTQPVGTEAKMSTQGKAEGASEGQTHFSDADADSQLPIL
TSLSPEQQRALRLALKGRNLFITGGAGSGKSLLIREIVYQLRHNKRRCVYVTATTGVAAL
NVRGSTVNSFAGVKFGDGDARQLLKWVRRSRRAAGRWRYCQTLIIDEISMMDPLLLDKLD
VIARAIRRRNEPFGGIQVILCGDFLQLPPIPPRNKPQQKTEENAEAQEGGDPTDGTPAPS
KLQYCFETSTWTSLNLITVILHKKFRQHDDLAFQQVLDELRVGSLSPESYELLLSRTVAS
KSSAKSRKKKDEDAGNDGVLPLTDAETTPAAAEKDRHVRLCATNKEVEMRNAKYFAALEP
KGLPIYPSPNDGSSQQTGSTNGANSVTEEDTMRPLQVYRAYDAYSTHETEPETTEETTTG
TQPSQPWVRFEDSTLPTDLALKVGTRVMVLQNISLRLGLVNGSVGEVVGFLHPLELVELV
LRAPRERHYPSARGQELLERAGLPTLQDAFRCVDTALGQSLFYYLREGIRRPEDASYGCV
YGNTHCRDILRLVGLGKTESANAVHPLEMYLGGIAPQHVRLTRLPIVRLDLREGNHTSSD
SGAVEGGGFANGSKRLPKHVYAFISPSSHQWYMGDQPVATRTQLPLRQAWAMTVHKAQGL
TISHVEVAIHRFFSPGQAYVALSRSTRLDNIRLLDFNNASVHACPRAKEFYTVLEEEELD
NEIEDDGTEGDEEALEGDGEYEGEVEE
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgctctcccgtctaagcgccgtatggcgtccctcacgtgtggcactgcggattcaacgc
gttgacttcaccacatgcggcaatcgcctcaaccgcagcactcaaccaaatgaaccgccg
ctggtgagtggcattgcggcccgctcccggactgcaaaggcggaacctgtggagaaacgc
gggcgagcggccattaaaatcgactccccaccaccgccacttgagccgccgcggatttct
gaggaacacatgacgaggcgacggaaagtcggaggtggaaaaacaaaagctgctgccgta
accaaatcgaagcagcggcgaagtggtcgaaccgtgggagcgagtgcgtttaacactgca
agaagagccaatggtatagaaggaagtgctccggggaaaggaggtgcttctgacgttgcc
atagatgatgatgacgatgagaaacttgtggatgaggaaagtaagcaactgatgcagctg
ttgaaggaggaagctctgcggcgcgaggaggagaaaaagaagcgcctccgagcaaaagca
gccgctgaagctactgaagtaacggatgataaagaatatctctcgaagttaggggttgct
gaacgcacacaaccggtgggtactgaggcgaagatgtcgactcagggaaaagcagagggg
gctagcgagggacaaacccacttcagtgatgctgacgctgatagccaacttcccatttta
acatcactcagtccagagcaacagcgcgcactaaggcttgcattaaaggggcgcaactta
ttcataacgggtggggcaggctctggaaagtcacttctcatccgcgagatcgtttaccaa
cttcggcacaacaaacgccgctgcgtatatgtgacggcaactactggagtagccgctctc
aatgttcgcggctcaactgtgaatagttttgccggcgtgaagtttggagatggggatgcg
cgtcagttattaaagtgggttcgccgcagtaggcgtgcggctggtcgatggcgttactgc
caaacactcatcatcgacgagatttcaatgatggatcccctgctacttgataagttagat
gtgattgcacgcgctatacgccgtcgtaatgaaccattcggtggtattcaggtaattcta
tgtggggacttcctgcagttaccgcctattccaccgcgcaataagccacaacaaaagacg
gaggaaaatgccgaagcgcaagaaggtggtgatccaactgatgggacaccggcgccgtcc
aaactacagtactgctttgagacgagtacatggacctcgttgaatctaataaccgtcatt
cttcataagaaattcaggcagcacgatgatttggcgtttcagcaggtccttgacgagctt
cgagtcggatcactgtcacctgagtcatacgaactattgttatctcgtactgttgcttcg
aaatccagcgcgaagtcacgcaaaaagaaggatgaggatgccggaaatgatggtgtgcta
ccacttaccgacgcagagacaacgccagcagcggcagagaaagatcggcacgtgcgactc
tgcgcaacaaacaaggaggtggaaatgcgtaatgcaaagtattttgccgcgctcgaaccc
aagggccttccaatttatccatcaccaaacgacggttcctcacaacagactggcagcact
aatggtgctaattctgtgacggaggaagacacaatgcgtccccttcaagtgtaccgagct
tatgatgcctacagcactcatgaaactgaacctgaaacgactgaagagacaactacaggt
acacaaccatcgcaaccttgggtacggtttgaggacagcacacttccaacagatcttgca
ctaaaggttggtacgcgagtgatggtacttcagaacatttcgcttcgacttggtctagtc
aatgggtccgttggtgaggtggtcggttttctccatccgcttgagcttgttgaacttgtt
cttcgggctccgcgtgaacgccattacccctcggcccgtggacaagaattgttggagcgc
gcagggttgcctacattacaagatgcgttccgctgtgtcgacaccgcccttggtcagtct
cttttctattacctgcgtgagggtattcgccgccctgaagacgcaagttatggctgcgta
tatggaaacacacattgccgagacatcttgcgtcttgttggtcttggcaaaactgagtct
gcgaatgccgtgcatcccctagagatgtatttgggtggcattgcaccgcaacacgttcgt
ctcacgcgcttacctattgttaggttggacctacgggagggaaaccacacatcctccgac
agtggtgcggttgaaggtggcgggttcgcaaatggtagtaaacgtctcccaaagcatgtc
tacgccttcatatcacccagttcgcatcagtggtacatgggggatcaacccgttgccacg
cgtacacaacttcccctgcgccaagcatgggcaatgacggttcacaaggcgcaaggtttg
acaatttcgcacgtggaagtggcaatccatcgcttcttttctcctggtcaggcgtatgtg
gctcttagtcgtagcacacggctggataatatccgattgttggacttcaacaatgcctcc
gtccatgcgtgtccaagagcgaaggagttttacacggttctagaagaggaggaactggat
aatgagattgaggatgatggaacagagggtgatgaagaggcactagagggtgatggggag
tatgaaggggaagtggaggaataa
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