Trypanosoma brucei gambiense: TbgDal_VIII5480
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Entry
TbgDal_VIII5480 CDS
T06526
Name
(RefSeq) apurinic/apyrimidinic endonuclease, putative
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
tbg
Trypanosoma brucei gambiense
Pathway
tbg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TbgDal_VIII5480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tbg03400
]
TbgDal_VIII5480
Enzymes [BR:
tbg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
TbgDal_VIII5480
DNA repair and recombination proteins [BR:
tbg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
TbgDal_VIII5480
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
23863765
NCBI-ProteinID:
XP_011775886
LinkDB
All DBs
Position
8:<1416763..>1417953
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AA seq
396 aa
AA seq
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MPPKKLSKLPLNTRMKRSRSRSPSATLPSKETKETDRSKAQSPVRSVSLPVGSGSASPVR
GDDLKKTEKSIWSQVEPFKRKTEAKDFKPREMLKFITWNVAGLRGLLKKDSEAIKKLLEE
EHPDALCLQETKLNVGDKGNEALGVVQGYDFVDHPCHAKKGYSGTRTYIKKEVAEKWNAV
FVKGFGGPNGVDDDKQENGDDEGRVLTTYFGGDQGCENTFRLALVNTYVPNSGMDLARLP
YRHKTFDVKMRNYLCKLDAAAMKANGTCNNVKDAQPPTGVIWAGDLNVAERDYDRYFAGT
FAAMQKCSGFTPEERTSFRETLRAVNAVDTFRELYPRAAPVYTFWSARINGRARGLGWRL
DYFVVSAALAGRVVDCFTMPMIMGSDHCPVQMWLRK
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgccaccgaaaaaactatccaagctaccactcaatacgaggatgaagcggtcccgcagt
cgttcaccatctgctacacttccttcaaaggaaacgaaggagacggaccgaagcaaagcc
cagtcacctgtccgctccgtgtcacttccagttggatcgggttcggcttcgccagtgcgg
ggggacgatctgaaaaagacagagaagagcatttggagtcaagtggaaccttttaagcgt
aagacagaggcgaaggactttaagcctcgggagatgctgaagtttatcacctggaatgtt
gccggattgcgtggactcttgaagaaagatagtgaggcgattaagaagttgttggaggag
gaacacccagatgcactctgcttgcaagaaacgaaactgaatgtgggggacaagggtaat
gaagctcttggcgtggtgcaggggtatgactttgtggaccacccttgtcatgcaaagaaa
ggatactctggtacacgtacttacattaagaaggaagtggcggaaaagtggaacgcggta
tttgttaaggggtttggtggccccaatggggttgacgatgacaaacaagagaatggggat
gatgagggccgtgtccttacaacatattttggcggcgatcaggggtgcgaaaacaccttt
aggttggcccttgtcaacacatacgtacccaatagtggtatggacctcgctcgccttccg
taccgtcacaaaacgtttgatgttaagatgcggaactatttgtgcaaactggacgcagcc
gctatgaaagctaacggcacctgcaacaatgtcaaggatgctcagccacctacgggtgtc
atatgggctggagaccttaatgtagcggagcgcgattatgaccgatatttcgcaggaact
ttcgccgccatgcagaagtgcagtggttttactccagaagagcgcacttcgttccgtgaa
acgttaagagccgtcaacgcggtggacacattccgggagttgtatccgcgtgcggcaccc
gtttacaccttctggtctgcgcgaatcaacggccgggcccgtggtctgggctggcgattg
gactattttgttgtatctgctgcacttgcgggccgtgttgtggattgtttcactatgccc
atgataatgggcagtgatcactgccctgtgcagatgtggctccgtaagtaa
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