Trypanosoma brucei gambiense: TbgDal_VIII5620
Help
Entry
TbgDal_VIII5620 CDS
T06526
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase, putative
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
tbg
Trypanosoma brucei gambiense
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tbg01002
]
TbgDal_VIII5620
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tbg04121
]
TbgDal_VIII5620
Enzymes [BR:
tbg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
TbgDal_VIII5620
Peptidases and inhibitors [BR:
tbg01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
TbgDal_VIII5620
Ubiquitin system [BR:
tbg04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
TbgDal_VIII5620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
ATG14
Motif
Other DBs
NCBI-GeneID:
23863781
NCBI-ProteinID:
XP_011775900
UniProt:
C9ZW35
LinkDB
All DBs
Position
8:1453116..1457375
Genome browser
AA seq
1419 aa
AA seq
DB search
MLDLDSWVDEFHAGNEQKAVNQDTCNAAAGSSPSPLSVDVITLAYRLRTPCCVRHTLPSD
CPVGCVASPWCLAGLSTLSTNNTTLQDFVADLLGDDTSLASSHQPQLQRGEHGPNDGDSP
AGTSSVDVYKYPIRRGIRDLGNTCYLNAVLQMLFHIPAVRDEVLRASASFPVAAHNSAKK
ITPLLASGLGELFAEMAYSRDERGVDAERFASFLSIDKGIQQDAQEFFVLLINWLQREVG
DAVRHVFEGTILHDRECSKCGRSCKRAEPFSFLSLPVRQSIEESLEELLRVHEVQGFKCE
ECGAVTSAFSRLHIRTLPDVLVVHFNRFSFSLQEKRREKITRSVSFPIEWDLTPYKDRWR
QVQKQTASNNSGVADSVVETRSNGAQLYRLVGVVNHHGEAAVCGHYTYHGKMDGHGGWYQ
FDNAVVTRLQRFHGTRASSKEAYMLVYERHAHPTNNPLTSAEEDVERAGALDTTIILPPH
LQNHIERLNHEVEKVRQARQLQRSVVMNFMKQWKDVADDIFYRSARRKGHPIAVMEECED
LTQYVAFPTRWMKLFGRCFIPSYIDTNRYCSFERGMKRHRRNSSKSAVELSNELPAAGSD
SKEVEDNAPPVAAEMVLDTTKGAMPGDCVLIKSIYKSTLTDYLEDVRCPHGKLAPWGQYK
LLSGASARRLNSFLNSVPSLLTSLTTVGEFTPFKGWKLSEYICEECVKRMSKEVQRIKTS
WNEDMEIQTAVTPTSKFAEREDADELVYVSVEAVEHWEQMLKVTEKYRYIVKQQGFTGLV
VAMKARSEDVDTEVIPLPSPSKLLCEHQLLSSVAAVREVPASVWHLLKKRILQLFYGDSV
SVKHTLTPSVKAHMEMLLPYLPVSRTGKCLECIQNKMRMMMERHSAKMEKLNEGKRFSTL
LEASRVMALPSVEVRIRHPNTLVWKRDIKRSYRRCYRTWEREQEDKITAVEARIKSLKEV
EGQREKKQRTLPTPPVRCDRKQSQEPSDSQQVCEVTCENSQSIPDVIEVPSPLQSACDEL
AALRAATPPDVSAVYGCIPAWWVARWYKWYTNDADTGVGPPPCVDYSAFFCQHGGTVLPP
SSLNPTDAHWSKTFTLGPIIRAWKSWLKDPSALDVVEESGSVHFPPIVLVPLKEMIAVLE
RYGGEGQLLPEVTDSNDLVTRLNNGRVVLFVERRGERMLDPPTCKICSTAVLDGVTELSR
GFIDGSLRLRLHLRRSKRQHYDANDVLSGVSYNMTVGKLKVEISQRVLEYHGYILPVNDM
KLLLGRKPLGPNKICKENTCANSNGNAPDGAASPSVASDDRNEGSATGALSTVDVDTCTL
FECGLRDGDEVTVDASNTPLEKVLVNDSLSIRVPGAPTSCSETPTAEDVAAFGATRLYGV
LDNVQNGRERKAPGQKACAVCTYLNVREAERCEMCEAAL
NT seq
4260 nt
NT seq
+upstream
nt +downstream
nt
atgcttgatctagatagctgggtggatgaatttcatgccggaaatgaacagaaagcggtg
aatcaagacacctgtaacgccgctgcgggatcttcaccctctccgttgagtgttgatgtc
atcacgttggcatatcgtctgcgtacaccctgctgtgtccgacacaccttaccgtccgat
tgtccggtggggtgcgtggcgtcaccatggtgtctcgctggactcagcaccttgtcaaca
aataacactacactacaagattttgtagcggaccttttgggtgatgatacgtcccttgca
tcgtcgcatcaaccgcagctgcaacggggtgaacatgggccaaatgacggtgattctcct
gcaggcacctcctcagtagacgtctacaaataccctattcggagaggcatacgtgacttg
ggtaacacctgttatttgaacgctgtgctgcagatgctcttccacatccctgcagtgcgg
gatgaagtgttacgggcgtctgcttcgttccctgtcgctgcccacaactctgcaaagaag
attacgccccttctggcatcaggcttaggtgagttgttcgcggagatggcgtacagtcgc
gatgagagaggtgtggatgccgaacgctttgcgtctttcctttccatcgataaggggatc
cagcaggatgcccaagagttcttcgtgttactaattaactggcttcagcgagaggtagga
gatgctgtaagacacgtctttgagggcaccattttgcatgatcgagagtgcagcaagtgt
ggtcgatcgtgtaagcgagccgagcccttctccttcctttcgctcccggtgaggcagagc
atcgaggagtcgctggaggagttactccgcgtccatgaagtgcaaggttttaaatgcgag
gaatgtggtgctgtaacgagtgcattttcgcgtctgcatattcgaacgttacctgacgtt
cttgtggttcattttaaccggtttagtttcagtctgcaggagaagaggcgggaaaaaata
acacgatcagttagttttccgattgagtgggatcttacaccgtacaaagataggtggagg
caagtgcaaaagcaaacggcgagtaataatagtggtgtcgccgattctgtagtagaaacc
cgttcgaacggtgcacagctttacaggcttgtcggcgttgtcaaccatcacggtgaggct
gcagtgtgtggacactacacctaccacgggaaaatggacggccacggtggatggtatcaa
tttgataatgcagtagtgacgaggctacagcgctttcatgggacgcgggcttcgtccaaa
gaggcctatatgttagtgtacgaacggcatgcgcatccaacaaacaacccattgacttct
gctgaagaagacgttgagagggcgggggcactggacacaactatcatcttgccccctcat
ctgcaaaatcatatcgaacgcctaaatcacgaagtggagaaggtccgacaggctaggcag
ttgcagcggtcggttgtgatgaattttatgaagcagtggaaagatgtggccgatgatatc
ttttaccgcagcgcgcgacgtaagggtcatccaatagccgttatggaggagtgtgaagat
cttacacagtacgtagcatttcccactcgatggatgaagctcttcggtcgctgtttcatt
ccctcttatattgatacaaatcgttattgtagtttcgagagaggaatgaagcgccatcgc
cggaactcgagcaaatcggcggttgaattaagtaatgagttgccggcggctggtagcgat
agcaaagaagttgaagacaatgcaccaccggtggccgcggagatggttcttgacaccaca
aaaggagcgatgccaggggactgcgttctgatcaagagcatttataagtctacactaaca
gactacttggaggacgtgcgttgccctcacggaaaattagcaccatggggtcagtacaaa
ctcctgtcaggagcttcggccaggagattgaatagttttctcaacagcgtaccctcgttg
ctcacttctctaactactgttggtgagtttactcccttcaaggggtggaaacttagtgag
tacatttgcgaggaatgcgtcaaacgcatgtcgaaagaggtccagcggataaagacgtca
tggaatgaggacatggagatccagaccgctgtcacccctacgtccaagtttgctgaacgt
gaagacgccgacgagctggtatacgtgagtgtggaagcggtggaacactgggaacagatg
ctaaaggtgactgaaaagtatcggtacattgtgaagcaacagggattcacgggtcttgta
gttgcgatgaaagcaagaagcgaggatgtggacaccgaagtgataccactgccgtctccg
tcgaagcttctgtgtgaacaccaacttctttcctcagttgcggcagttcgcgaggttcca
gcatctgtttggcatctcctcaagaagcgtatcttgcaactgttctatggtgacagtgtc
agcgtcaagcataccctcaccccttcagtgaaggcacatatggaaatgttacttccctac
ctccctgtcagtcgcacaggcaagtgcctggaatgcattcaaaacaaaatgaggatgatg
atggagcgccacagtgctaagatggaaaagttaaacgaaggaaagcgtttttctacgctt
ctagaggctagtcgggtgatggcacttccttctgtggaggttcgtattcgacatcccaac
acgctcgtgtggaaacgagatattaagcgctcgtatcgtcgctgttaccgcacgtgggaa
agggagcaagaggacaagatcacggcagttgaagctcgaattaagagtctgaaggaggtg
gagggacaacgggagaaaaaacagaggaccctccccacgccgcctgtaaggtgcgacaga
aagcagtcacaagaaccgtcggacagtcaacaagtctgtgaagtgacctgtgaaaactcc
caatctatccctgatgttatagaagttccctcacctttgcaatcggcctgtgacgaactc
gctgcactccgtgcagcgacacccccagatgtttccgctgtgtatggttgtatcccagca
tggtgggtagcgcggtggtacaaatggtatacaaatgatgccgatacgggtgttggccca
ccaccttgtgtcgactattctgcgtttttttgccaacacggaggcacggtgctgccaccg
agttcactcaaccccacagacgctcattggagcaaaacgtttacccttggccctattata
cgggcatggaaaagttggctgaaggatccatcggcgcttgatgtcgttgaagagagtggg
tcggtccacttccctccaatcgtgctagtaccgctaaaggagatgattgccgtgctcgaa
aggtatgggggcgagggacagctactaccggaggtaactgactcaaatgatcttgtcacc
cgcttgaacaatggcagagttgtgttgtttgtggagcgaaggggggagcgcatgcttgac
ccgccgacatgtaagatctgctcgactgccgtacttgacggggttacagagttgtctcgg
ggcttcatagatggcagtttacggttgcgtctccaccttcgccgcagtaagagacaacac
tacgatgctaatgatgtgctctctggtgttagttacaacatgactgtgggaaaactgaag
gttgaaatttctcagcgagtgcttgaatatcacggctacatcctacctgtgaatgacatg
aaattgctcctcgggcgaaagccgcttggacccaataagatctgcaaggagaacacgtgt
gcaaacagcaatggaaatgctcctgatggcgcagcttccccttctgtagcatccgacgat
cgcaatgaggggtcggcaacgggagcactctccacggttgatgtggacacatgtacgttg
tttgagtgcggccttcgtgatggcgatgaagtaacagttgacgcctcgaacacaccttta
gaaaaggtgctagtaaatgacagcctcagtattcgggtgccgggggctccaacatcttgt
tcagaaacgccaactgcagaagacgttgcggcattcggagcgactcgactgtacggagtg
ctggataacgtacaaaacgggcgcgagaggaaggctccagggcagaaggcatgtgcagtt
tgcacttacctgaacgttcgcgaagcggagcgctgtgaaatgtgtgaagcggcactgtag
DBGET
integrated database retrieval system