KEGG   Trypanosoma brucei gambiense: TbgDal_VIII5990
Entry
TbgDal_VIII5990   CDS       T06526                                 
Name
(RefSeq) hypothetical protein, conserved
  KO
K14855  ribosome assembly protein 4
Organism
tbg  Trypanosoma brucei gambiense
Brite
KEGG Orthology (KO) [BR:tbg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tbg03009]
    TbgDal_VIII5990
Ribosome biogenesis [BR:tbg03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    TbgDal_VIII5990
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 Beta-prop_IFT122_1st Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd EIF3I WD40_Gbeta WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_2nd DSE1_N ANAPC4_WD40 Beta-prop_Aladin Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_1st WDR90_beta-prop_4th Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_TEP1_C Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_SCAP NLE Tricorn_2nd Beta-prop_Vps41 CFAP251_N ASA1 Beta-prop_DCAF12 Beta-prop_WDR41 Beta-prop_EIPR1 Ge1_WD40 RMC1_N PAC11 Tricorn_N Beta-prop_VPS8 Beta-prop_HPS5 eIF2A Beta-prop_SPT8 Beta-prop_NOL10_N Beta-prop_DCAF4 Beta-prop_NWD2_C WDR54 PROPPIN Ig_CFAP65_4th
Other DBs
NCBI-GeneID: 23863821
NCBI-ProteinID: XP_011775937
UniProt: C9ZW72
LinkDB
Position
8:<1540318..>1542168
AA seq 616 aa
MGFLSTPHPQRSIHWHTCRYVACLLRLSLLLLLLFPSQNNRSVNVFPTTCVYVETHVHFF
FRHFLASFFLLRSRNTFASYTNPDCVPHSSVSMPVRKKQRREVVVADADAGDSGDEDQKR
NAVVMTRLVSETGEPVGTQILLPVNATPKQLDDLLNSMMGKEAEGTPYAFFIGGEQVNDS
VRDTLFQKQRDDYVDTMLKEGRRVRPQDVEKLTFELPEEAVVEIQFKPQAKFKVRPVTRC
SGKLDGHSEAVLIVSFSPDGELLATGGGDKEIRLWDVHTLTPTEELKGHTSWVQVLSWSP
DGKYLASGSKDGSLIVWSGNGESGKYKGARHKAHSAYLTHVSWEPLHVNSSCNRFVSASK
DTTLKVWHTVTGLQFSLSGHQAGVTCVKWGGEGRIYSSSQDRTIIIWDSSNGAPRSVLRG
HAHWVNFIALSTDLVIRTGAFDHECRKFDTREEMQQYATARYQDVLARLDGRERLVSCSD
DNTMFLWSPQQQVTPLGRMTGHQGAIFHIQFSPDGTMIASSSADKSVKLWNASDGKFITT
FRGHVAAVYHVSWSLDSRLLVSGSRDSTLKLWSVSKRELVEDLSGHSDEIFSTDWSPDGQ
RVATGSKDKKVLIWVH
NT seq 1851 nt   +upstreamnt  +downstreamnt
atggggtttttgtcaactccccacccccaacgcagtatacattggcatacatgcaggtat
gtggcttgccttctacgcctttcgctgttgttattattattattcccttcacaaaacaac
aggagtgtaaacgttttccctactacttgcgtgtatgtggagacacacgtgcattttttt
tttcggcatttccttgcttcgtttttccttttacgtagcagaaacacttttgcatcgtac
accaaccccgactgtgtaccgcactcgagtgtatcaatgccagtccgaaagaagcaacgg
cgcgaagtggtcgtggcagacgccgatgctggtgactctggtgatgaggaccaaaagagg
aatgcagtcgttatgacgcgccttgttagtgaaactggggaaccggtgggaacgcaaatc
ctcttgccagttaacgcgacaccaaagcagctggacgacctgctcaacagcatgatggga
aaagaagcagagggaacgccctatgcgttttttataggaggtgagcaagttaacgatagt
gtccgggatacgctcttccagaagcagcgggatgattatgttgataccatgttgaaggag
ggaaggcgcgtgagaccacaagacgtggaaaaactgacttttgagttgccagaagaagct
gttgttgaaattcagtttaaaccgcaagcgaagtttaaggtgcggcctgtgacacgttgt
tcggggaaacttgacggccacagtgaggctgtgcttattgtgagcttctcgcccgatggt
gagcttctcgccacgggtggtggtgacaaagaaatacggctttgggatgtgcatacactg
accccaacagaggaactcaagggacataccagttgggttcaggtgttgtcgtggtcccca
gacgggaagtacctcgcgagtgggagtaaagatggttctctcattgtttggtcaggtaat
ggggaaagtggcaaatacaagggagctcgtcacaaggcgcactcagcttatctgacccat
gtatcgtgggagcctctgcatgtgaactcctcgtgcaatcggtttgtgtccgctagcaaa
gatacgacccttaaggtctggcataccgtgactggtcttcagttttctctttcggggcac
caggcgggtgtgacttgtgtgaagtggggtggggagggaagaatttattcatcttcccaa
gaccgtaccataattatttgggactcaagtaacggcgccccccgcagcgtgcttcgtgga
cacgcacactgggtgaacttcattgcattaagcacagacctcgtcattaggactggtgcc
ttcgaccatgagtgccggaagttcgatacccgtgaggagatgcagcagtacgcaacagcg
cgctaccaggacgtgttggcacgacttgatggccgcgagcgacttgttagttgttctgat
gacaataccatgttcctgtggtctcctcagcagcaggttacgccactcgggcgaatgacc
ggccatcagggtgccattttccacatccagttcagccccgatggtaccatgatcgcatct
agttcagccgacaagagcgtgaaactgtggaacgcttcagacgggaagttcatcacgaca
tttaggggacacgtggcggctgtgtatcatgtcagctggagtctggattctaggcttcta
gtctcggggagtagagactccacgctgaaactgtggtcagtatccaaacgcgagcttgtt
gaagatctctcgggacatagcgatgagattttttccacagactggagtcccgacggccag
cgggtcgccactggttccaaggacaagaaagttctaatttgggtccactaa

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