KEGG   Trypanosoma brucei gambiense: TbgDal_X1000
Entry
TbgDal_X1000      CDS       T06526                                 
Name
(RefSeq) DNA repair and recombination helicase protein PIF1, putative
  KO
K15255  ATP-dependent DNA helicase PIF1 [EC:5.6.2.3]
Organism
tbg  Trypanosoma brucei gambiense
Brite
KEGG Orthology (KO) [BR:tbg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tbg03032]
    TbgDal_X1000
   03029 Mitochondrial biogenesis [BR:tbg03029]
    TbgDal_X1000
Enzymes [BR:tbg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     TbgDal_X1000
DNA replication proteins [BR:tbg03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    TbgDal_X1000
Mitochondrial biogenesis [BR:tbg03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Mitochondrial DNA maintenance factors
    TbgDal_X1000
SSDB
Motif
Pfam: PIF1 AAA_19 AAA_30 Viral_helicase1 AAA_22 TrwB_AAD_bind Herpes_Helicase DEAD AAA_24 AAA_5 Pif1_2B_dom UvrD-helicase UvrD_C_2 AAA_16 SLFN-g3_helicase DnaB_C ATPase_2 P-loop_TraG
Other DBs
NCBI-GeneID: 23864167
NCBI-ProteinID: XP_011777285
UniProt: D0A177
LinkDB
Position
10:197809..200199
AA seq 796 aa
MAVLRPKITLTSVRGRIQVTAEDGERVGPWGGTECFLSRQTGQGPCLVVRSSRHKRHQGT
FFRLEGVRQVLSLYAMEGKLTVVVPHQKRLCSVFIETFADVDALQMMAATLQDRSRWKDI
EKNVACRVQRITRTNVVDTKRITNMDGGTDTHLDYEQFEWGGGEDDSCAVGGVSCNPLEG
ARGERNGDGVESILQERPTGLPSAHSGGKLPKHMGGDELNPQLEGSTTPGRMQWTTDQIV
ATRLVCTGSNVFITGSAGTGKTEWLLHLVRNVLPRDDRTVVTASTGMSARLLGGCTIHSF
AGIGRGEGGFNRVYNRVKSKPEVVRAWRQCQTLIIDEIGNISPDTFSMIDEIARSLRGAP
EKPFGGIQVILLGDFLQLPPVDSPKARNEWTNGNDTDTDSNPIPGKLKWCFETATWESLK
LALVGFRKSYRQMNDPDFALCLEDIRFGRYTRRVERILNECSTRQIKERHGIEPTLIVAR
RDEATEYNAERLKMLEDVHFHRYESEDYAAIPGMNLEKEVSLQQLLELRIGAQVVLLASL
PDAPHLSNGDQGVVVSFAEQTRGPALPVVCFATSGGEEVLVPRVSMEVLGPEGRVIATRT
QIPLQLSWAITVHRAQGMTLPLVSVRLNKCFFDCGQAYVALSRVRSREDLMLTAFDPSAI
FADARAVDFYEKNFPAQRQSVEDTECELVTIKGKTRAKHPRSQGEKNSVDEGGNAPEEHP
LRTDAAFTAYHDLDSQVSTDMPLVPQPPRKKRMLVEELPQVTSSAIPNFTQESNNGDANS
QLQHPFSQNKLMVDDD
NT seq 2391 nt   +upstreamnt  +downstreamnt
atggcagtactgcgaccaaagataactttaacatccgtgcgaggtcgcatacaggtaact
gccgaagacggtgagcgagtaggaccatggggtggcactgagtgttttctctcgcgacag
acaggacaagggccgtgtctcgtcgttcgttcaagccgacataagcgccaccagggaact
tttttccgactagaaggtgtgcggcaagtgctttccctatacgcgatggagggaaaactg
acagttgttgtgccgcatcaaaaacgcctctgcagcgtgttcatcgagacatttgcagac
gttgacgcgctacagatgatggcggccactttgcaggatcgcagtcggtggaaggatata
gaaaagaacgtcgcatgccgagtgcagcgcattacccgcacgaacgtagtggatacaaaa
aggatcacaaatatggacggtggtactgatacccatttggactacgaacagtttgaatgg
ggtgggggtgaagacgacagttgtgcagtgggaggagttagttgcaaccccctggagggt
gcgcgtggggaaaggaacggagacggcgttgagtcgattctgcaggagcgcccaacgggt
ctcccttctgcacatagtgggggcaagctgccgaaacatatggggggagacgagttgaat
ccacagttggaggggtcaacaacacccggtaggatgcaatggacaacggatcaaatagtt
gcgacgcggcttgtctgcactgggagcaatgtttttataacaggctccgctggcacgggc
aagacagagtggctactccatctggtaagaaatgtcctacctcgtgacgatagaacagtc
gtaaccgcctctacgggtatgtccgcccgcttactaggtgggtgtacgatccattctttt
gcgggtattgggcggggagagggaggttttaacagagtatacaaccgtgtgaaaagcaaa
ccggaggtggtgcgcgcatggcggcaatgccaaacgctgattatcgatgagattgggaac
atctcccccgatacattttccatgattgacgaaattgctagaagtctgcgtggggcacct
gaaaaaccatttggtggcattcaggttattctccttggcgacttcctgcagctcccgcct
gtagattcacccaaggctcgtaacgagtggacaaacgggaatgacactgacacggacagc
aatcccatcccgggcaagttgaagtggtgttttgaaactgccacgtgggagagtctgaag
cttgctctcgttgggttcaggaagagctacaggcagatgaacgaccccgactttgcacta
tgtttagaggacatacgctttggtcgctatacgagacgtgttgagaggattttgaacgag
tgcagtacccgtcagataaaggagcggcatggcatcgaaccgacactgatcgtcgcccgc
cgtgacgaggcgacagagtacaatgcggaacggctcaagatgcttgaggatgtacatttt
caccgctatgaatcggaggattatgcggctattccagggatgaacttggaaaaggaggtt
tctcttcaacaattactggagttgcgcataggtgcacaagtcgttctcctagcgtcacta
cctgatgctcctcatctttctaacggtgatcaaggtgtcgttgtttcctttgccgagcaa
acccgaggtccagctcttccagtggtttgcttcgccactagtggtggtgaggaggtgctg
gtcccccgtgtttccatggaggtgttgggtcctgagggaagagtaattgcaacccgcacc
caaattcccttacagttatcatgggccataacggtacatcgcgcgcaagggatgacactt
cccctggtgagtgtgcgattgaacaaatgtttttttgactgcggccaggcgtacgtagca
ttgtcaagggtgcggtcccgggaggatctgatgcttacagcgttcgatccgtcagctata
tttgctgacgcccgggctgttgacttctatgagaagaacttccccgctcagcggcagagt
gtcgaagataccgagtgcgagctagtaactatcaaggggaaaacaagggcaaaacacccg
cgttctcagggagagaaaaacagtgttgatgaggggggaaatgcccctgaggagcaccca
ctgagaacagatgccgccttcacggcttaccacgaccttgatagccaggtcagcactgac
atgccactagtgccgcaaccaccgagaaaaaagagaatgttggtggaagagctgcctcaa
gtaacgtctagcgccattccgaacttcacgcaagagagcaacaacggtgacgcaaattca
caacttcagcaccccttttctcagaacaagctaatggtggacgatgattga

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