Trypanosoma brucei gambiense: TbgDal_X13330
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Entry
TbgDal_X13330 CDS
T06526
Name
(RefSeq) DNA mismatch repair protein, putative
KO
K08735
DNA mismatch repair protein MSH2
Organism
tbg
Trypanosoma brucei gambiense
Pathway
tbg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
TbgDal_X13330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tbg03400
]
TbgDal_X13330
DNA repair and recombination proteins [BR:
tbg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
TbgDal_X13330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
AAA_27
Motif
Other DBs
NCBI-GeneID:
23864531
NCBI-ProteinID:
XP_011778500
UniProt:
D0A4P2
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Position
10:complement(2580536..2583391)
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AA seq
951 aa
AA seq
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MSDDRDPAVVQAFNGAGGDDTSCLRLFSRASAGCFILGSWASLVAREYVKSTAVLKNWSG
VDAVAVNDSITREVIRDCLLRRGVSVEQYDRQTSGGRYVCMRRGSPGHIADFEAMLFAFE
DAEIQLMAIGSVVIDDKANRVNGPGGQHVRVGYAALNTTLRTLTYAEYHDTPQLTNLDVL
MAQCNLKQLLYSNTDFSMNNTGEKAADSDESREQSDLLRALKQLCERANITLQERGQSNL
PHGKQKSRATKRNSTGPNGELLSTLEGILRVPEDRHGLNSFPLASRALESLLESAIDPFD
STNQHTFYLKHVIPSTFMKMDAAAIEALHIIHRKPEARGSMPTSIYSWLNRCTTGMGSRL
MQQWLLQPLRSIEDINQRLSLVQIMVESPILRDALITQVLRRCTDMDRLNRKLQRRTVAL
KDLQSILVFANTVPLAVDVLRTYHGGHDSSLLLKGYVTPLEDISEHLSNLRTLINATVDL
SDENTVRINPEFDDDLSFLERQRQNLVKAIEKENHRVLKQCGWTEKQMKCEYHASYGYVF
RVPRKDDHQVRTSKEFITVSTAKDGVRFVSGQLSSLSEQYKGITEDYKTRQQVLKKKLVD
TVATYLPVLDDAKELLAALDVFAAWALVVKDSSRPMVRPTVRATQSEEVKGNVDNNSDGA
ILTIVNARHPLVELRQPAFTPNTVQLTNEANALIITGPNMGGKSTFMRSIGVCVALAQAG
CFVPADSADIVVRDAIMCRVGATDHLAQGVSTFMVEMLESAAMLNSATQQTLAIVDELGR
GTSTYDGFGLAWAIAQEVAVNAKSALLFSTHFHEMTQLAARHTNVRNVHFGADVDTAART
LRFSYQLQPGPCGRSYGLYVAQLAHIPDDVLDSARQKAVELEDFGGDETKNRAQALFSTA
TPEVVQRVTEYAKRIRELESGEGDGDSREAARRRLCSEIKEDALLSSLVEV
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacgaccgcgacccggcggtggtgcaggcctttaatggtgccggtggcgatgat
acttcctgcttgcggttgttctcgcgtgcatcggctggctgttttattctaggcagctgg
gcttcactcgtggcgcgtgaatatgtcaagtccactgccgttctgaagaactggagcgga
gtggatgccgtcgccgttaatgacagcatcacccgcgaagtcatacgtgactgcctgctt
cgacgcggtgtttctgttgaacaatacgaccgacagacgagcggcggcagatatgtttgc
atgcggcgcggctcccctgggcacattgcagacttcgaagcaatgctctttgccttcgaa
gacgcagagatacaactcatggcaattgggagtgtggttattgacgataaagcaaatagg
gttaatggcccaggtggacagcacgttcgggtgggttacgcagcgctcaatacaacacta
cggacacttacgtacgcggaatatcatgacacaccacagttaacaaaccttgatgtgctt
atggcgcagtgtaacctgaagcagctgctgtactctaacactgacttttcgatgaataat
acgggtgagaaggctgcagactctgacgaaagtagggaacagagtgatttgttacgagca
ctcaagcagctctgtgaacgagcgaacattacgctccaagagcgtggacaaagtaatcta
cctcatggaaagcagaagtccagggccacgaagcgtaacagcactggcccgaatggagag
ctacttagcacgctcgaagggattcttcgcgtgccggaagatagacatggtttaaatagc
ttccctcttgcttccagggctttggaaagccttctagaatccgccatagatccattcgat
tccactaatcaacatacattttaccttaagcatgttatcccttctacgttcatgaagatg
gatgcggcagccatcgaggcgctgcatataatccaccgaaagccagaggcacgaggatcg
atgccaacgtctatttactcgtggttgaaccgctgtactacgggtatggggtcgcgactg
atgcagcagtggctactccaaccgttgcggagcatcgaagatataaatcaacggctctcg
cttgtacagataatggtggagagtccaatcctaagggatgcgctgatcacgcaggtactg
cggcgctgcactgacatggacaggttgaaccgaaagttgcaacgccgcacagtggctctc
aaggacctgcaatctattcttgtcttcgctaatactgtacccctagcggtcgatgtgctg
cgaacatatcacggcgggcacgacagcagcttacttttgaagggatacgtgacacctctg
gaagacattagcgagcatctttcaaatctgcgcacgttgataaatgcaaccgttgacttg
tcagatgagaataccgtgcgtattaaccctgaatttgacgatgacctcagcttcctggag
cggcagcgtcagaatcttgtgaaggcgattgaaaaagaaaaccaccgtgtgctgaaacag
tgcggatggactgaaaaacaaatgaagtgtgaatatcacgctagttacggttatgtgttt
cgcgttcctcggaaagatgaccaccaggtgcgcacgagcaaagagttcataacggtaagc
acggcaaaggatggcgtacggttcgtatccgggcaattatcatcgctgagcgagcagtat
aagggcattactgaggactacaagacacgtcagcaggtcctcaaaaaaaagctcgttgat
actgtagctacatacctcccggtccttgatgatgcgaaagagctacttgcagcattggat
gtgttcgcggcgtgggcactcgtagtgaaggattcgtcgcggccgatggtgcgtcccacc
gtgagggcaacacagagtgaggaggtgaaaggaaacgttgacaacaacagcgatggtgct
attttgaccattgtgaacgcccgacacccccttgttgaactgcggcagcccgccttcaca
ccgaatactgtacaacttaccaacgaggccaatgcccttataataactgggccaaatatg
ggaggtaagtcaactttcatgaggagcattggtgtttgtgtcgcactcgcccaagctggg
tgctttgttcccgcggattcagcggatattgttgtccgtgacgcgatcatgtgccgtgtt
ggcgcgacagaccaccttgcgcaaggagtttctaccttcatggtggaaatgctcgagtcc
gcggctatgctcaactccgccacccaacagactctggccattgtagatgaactgggccgg
gggacgtcaacgtacgatggattcggtcttgcctgggccattgcacaggaggtggcagtc
aacgcaaagtctgcacttctcttttcaactcatttccacgaaatgacacaacttgcggcc
cgacatacaaacgtgcggaacgttcatttcggcgctgatgtggatactgccgctcggacc
ttacgtttctcttaccaacttcaaccagggccatgcgggcgcagctacggattgtacgtg
gcgcaactcgcgcacattcccgacgacgtgctcgattccgcgcggcagaaggctgtggag
ttggaggatttcgggggagacgaaaccaagaaccgcgctcaggcgctcttttccaccgcc
acgccggaggttgtgcaacgggtgacggagtatgcaaagcgcatccgcgagttggaaagt
ggggagggcgacggtgactcgagggaggctgcccgtcgccggctgtgcagcgagattaag
gaagatgcattgttgtcgtcattggtggaggtgtga
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