Trypanosoma brucei gambiense: TbgDal_X15710
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Entry
TbgDal_X15710 CDS
T06526
Name
(RefSeq) S. cerevisiae Vps16 homolog, putative
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
tbg
Trypanosoma brucei gambiense
Pathway
tbg04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
TbgDal_X15710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tbg04131
]
TbgDal_X15710
Membrane trafficking [BR:
tbg04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
TbgDal_X15710
Hops complex
TbgDal_X15710
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
TPR_ZFYVE26
Motif
Other DBs
NCBI-GeneID:
23864792
NCBI-ProteinID:
XP_011778735
UniProt:
D0A5C7
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All DBs
Position
10:complement(<3044670..>3047417)
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AA seq
915 aa
AA seq
DB search
MSRPRRFVRTARVGAWIALGRENVVRLVDFDDLLWGLDVDFFRYDIAYCRSGGLLALYHR
NVSSSGSRGSVIKLYNANGTPHPLSPQIYLDDMTNLMFACWDYPKDNLIVVSNSGALRFF
NFRGEPIGSSLRVPVPSLCTSTEAGVALLVGLQELRLVLVESGSTEGYEAVSISIPRLLH
DNKPCSMLAVPPRFSDSGHTEIFVPFVTTENASTVYHIVFHEKYMCHDLGVYIEGGNFVH
MALSPNGRSVAFMVRDGTVYVASRSFDDITRLLNINTDVIPSQFMWCGDRCISYLHRNKQ
FDAALNFPTTLSLLSVDDPDKSDYLNDIPVDAHLVPECDGVRILSARSYQFLQVVPEPVR
RIFSVGSRAKSAMLLSAYDEFMCGNANSVKIIRDLQRDKHGLSEAVDDCIAAAKFELSVS
QQKRLMRVAAFGKSFCAMYESDVFVDVIRHLRAVNMLCKSKAGTLLSQAQLSELKEKLVR
RLALLNYHQLAYHVCELLGFSAKDVMMEWAMLMLTNSSVSQADEGRLVSRVVDKLKCCKQ
SAYCEIALKLYRSQRVSAALAVLEAETSVSERISHLLQINQLEEGLRQAIRSGDTGLIFT
VIKYLISSESSDALTLLKKFVTSRRMLFAFAKSARVTNSKVMEIFKTYPDECAYLDLLRY
LEEVRVSTGKRGEGGQSCEDLLVIKLNIVRSTLLSCPMGTVNIPSKGGLSGSTYSHSLLS
GSFRPPSDSEKWLRLHMDLMEEQKNLVKKLKDRRFLDASVTKTITLCHEHGCKDVADRIK
NKFGVSDKMNTWCMVKAAVETKQWNLVDEISDIRGKGRSPVSGFAFVRALFANCQRQQAK
QYIPKIPQIEWRMEYYVLCGDWKTAGADCRRHSEPELLSQLKDRAKGDTDALRQIEEGWN
SVQESGAVRLAKLFG
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgtccaagaaggtttgtgagaactgcaagggttggcgcatggatagctcttggt
cgagaaaatgtagttcgacttgttgactttgatgatttactgtggggactggacgttgac
tttttcaggtatgatattgcttattgtcgttcgggtggactactggccttgtatcatcgt
aatgtatcttcttcggggagtaggggaagcgttatcaaactttacaacgccaacgggaca
ccacatcctttatctccgcaaatatatttggatgatatgacaaacttaatgtttgcatgt
tgggattatcccaaagataatcttatagtcgtttctaattctggggcgctgcgttttttt
aattttagaggagaacctattgggtcgtctctgagggttccagtaccatctttatgtact
agcaccgaagccggtgttgccttgcttgtaggacttcaggaactccgactggtactggtt
gagagcggcagtactgaggggtacgaagcggtctcgatttcaatacctcgtctgcttcat
gataataaaccttgttcaatgttagcagtaccgccgcgatttagcgatagtgggcatacc
gagatttttgtaccttttgttacaacggaaaacgcttcgaccgtttatcatatcgtattt
cacgaaaagtatatgtgccacgatctgggtgtttacatcgaaggtgggaattttgttcat
atggcgctttctcccaacggccgaagtgtggcttttatggttcgtgatggtacagtatat
gttgcttcacgttcttttgatgatatcacacgtcttttgaacataaacacagatgtaata
ccatctcagtttatgtggtgtggggataggtgcatatcgtacttgcatcggaataagcag
ttcgatgctgcgcttaattttccaacgactctcagtttactcagtgtcgatgatccggat
aaatcagattacctcaacgatattccggtcgatgcccacctggttcctgaatgcgatggt
gtgcggattctttcagctcgctcgtatcaatttctccaggttgtacccgagcccgtacga
cgtattttttctgtgggatcgcgagctaaatccgccatgttgttatcggcatatgatgag
tttatgtgtggaaacgccaactctgtgaaaataatccgtgatttgcaaagggacaaacat
gggctctccgaggcagtggacgattgcatcgccgctgccaaattcgagttgagtgtatcg
cagcagaagcgattgatgcgtgtagcagccttcggtaagtcgttttgtgcaatgtacgaa
tctgatgttttcgttgacgttattcggcacctccgagcggtcaatatgttgtgcaagagt
aaagcagggacgttgttatcccaagcgcagttgtcagaattaaaagagaaattagtaagg
cgactcgcgctgctgaattatcaccaacttgcatatcatgtgtgtgagttgctgggtttc
agcgccaaggatgtcatgatggagtgggcgatgctgatgttaacgaactcttccgtctcg
caggcagatgaggggcgcctggtctccagagttgtggacaaattaaagtgctgtaagcag
tctgcatattgcgaaattgcgcttaaactttatcgcagtcagagagtaagtgcggctctt
gctgtactcgaggctgaaacatcagtatcggagagaatatctcacttgctgcaaatcaat
caactggaggaggggcttcgacaagctataaggtcgggtgatacaggattaatttttacg
gtcataaaatatttgatttcctctgaaagcagtgacgcgttgaccctcttgaagaagttc
gtcacatcaaggagaatgctgttcgcatttgccaagtcagcgagagtgacgaatagtaaa
gtgatggaaatctttaagacatacccagatgagtgcgcttacttagatcttttacgctac
ctcgaggaggtaagggtttctaccggtaaacgtggggaggggggtcaaagttgtgaggac
ttgctagtaatcaagcttaatattgtgcgctctacgctgttgtcatgcccaatgggtact
gtaaatataccttcgaaaggcggtttgagtgggagcacttactcccactcgctgctttca
ggttcattccgaccaccctctgatagcgaaaaatggcttcggctgcacatggatctcatg
gaggaacaaaaaaatctggtaaagaaactaaaggatcgtcgtttcttggatgccagtgtc
acaaaaacaattactctttgccacgagcatggttgcaaggatgttgccgatcgtattaag
aacaagtttggagtttccgacaaaatgaatacctggtgtatggtaaaagcagctgtggaa
acaaagcagtggaatcttgtcgatgagataagtgatattagaggcaaaggtaggtcccct
gttagtggttttgcatttgtgagagcactttttgccaattgtcagcgacagcaagccaaa
cagtacatacctaaaattcctcaaatagaatggagaatggaatactatgtcctttgtggc
gattggaaaactgcgggtgcggattgtcgccgtcattctgaaccggaattgttaagtcag
ttgaaggacagagcaaaaggggatactgacgctttgcggcaaattgaggaaggatggaat
tctgtccaagagtcgggtgccgtaagattggccaaattattcggatga
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