KEGG   Trypanosoma brucei gambiense: TbgDal_X16570
Entry
TbgDal_X16570     CDS       T06526                                 
Name
(RefSeq) protein transport protein Sec13, putative
  KO
K14004  protein transport protein SEC13
Organism
tbg  Trypanosoma brucei gambiense
Pathway
tbg03013  Nucleocytoplasmic transport
tbg04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:tbg00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    TbgDal_X16570
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    TbgDal_X16570
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tbg03019]
    TbgDal_X16570
   04131 Membrane trafficking [BR:tbg04131]
    TbgDal_X16570
Messenger RNA biogenesis [BR:tbg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     TbgDal_X16570
Membrane trafficking [BR:tbg04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    TbgDal_X16570
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    TbgDal_X16570
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    TbgDal_X16570
SSDB
Motif
Pfam: WD40 Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_Prp19 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_WDR3_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_EIPR1 WD40_Gbeta Beta-prop_WDR35_TULP_N Beta-prop_RIG_2nd EIF3I Beta-prop_Vps41 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR19_1st Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5
Other DBs
NCBI-GeneID: 23864884
NCBI-ProteinID: XP_011778818
LinkDB
Position
10:complement(<3220007..>3221131)
AA seq 374 aa
MLHSTRYPSQNRTIGGYGQAAPVAPHDMHQQRQPQQPQQFQQQQPQEHQDIIHDTQFDYY
GQQLATASSDRTIGIHTVRDGQMQRVATLIGHEGPVWMVSWAHPRFGTVLASAGYDHKAI
VWKEVSQPTRQWRPVHVIDIHQGSVNAVQWAPESPMLATASSDGTVAVTTYEEGAWRESV
KLSNNSNNIAHAMGATCVSFAPTCPQLGNGRLLVSGGCDSRVRLWYLPEGGAAGAHPYHF
LELLEGHTDWVRDVAFEPLSAATRYAVIASCGQDRSVIIHRKQWSHLTTCIDDRGLRSGE
GGRDAMGEVSGGWERSCVLFDEPVWRLSWSPTGGMLVVTTGNSEVFILREGNEFCQPWFK
TPLSEYENQNQRVH
NT seq 1125 nt   +upstreamnt  +downstreamnt
atgcttcattcaactagatacccgtcgcaaaaccgcactattggtggctacggccaggca
gcaccagtggcaccccatgatatgcatcaacagagacaaccacagcagccccaacaattc
cagcagcagcaacctcaggaacatcaggacataatccacgacacgcaattcgactactac
ggacagcaactcgcgaccgcaagctccgaccgcactataggcattcacacggtccgagac
ggtcagatgcagcgagttgcgaccctcataggtcatgagggtcccgtgtggatggtgagt
tgggcacacccgcgctttggcactgtcttggcatcggctggctacgatcacaaggcaatt
gtatggaaagaagtgtcgcaacccacacgccaatggcgaccagtgcatgtgattgacatt
caccagggtagcgtcaatgccgtacagtgggcacccgaatctcccatgcttgcgacggcg
agtagtgatggcaccgtggcagtaacaacatatgaagagggtgcctggcgtgagagcgtt
aaactgagtaacaacagcaacaacatcgcacatgccatgggagccacatgcgtatcattt
gcgcccacttgtccacagttgggtaacgggaggcttttggtctctggtggatgtgactca
cgagttcgtttgtggtacttacccgaaggcggcgctgctggggcccatccctatcacttc
ctggagttgctcgaaggtcacacagactgggtgcgagacgttgctttcgaacctctttcc
gctgcgacgcgatacgcagttattgctagttgcggacaggacaggagtgtcatcattcac
cgcaaacagtggagtcacctcacgacttgtattgatgaccgggggttgcggagcggcgaa
gggggaagggatgccatgggagaggtgagcggtggttgggagcgcagttgcgtcctcttc
gatgagccggtatggcgtctctcgtggtcgcccactggaggcatgctggtggttacaact
ggcaattcggaagtgtttatcctccgtgaaggcaatgagttttgccaaccatggtttaaa
acacctctcagcgaatacgaaaaccaaaatcagcgggttcactga

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