Trypanosoma brucei gambiense: TbgDal_X7000
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Entry
TbgDal_X7000 CDS
T06526
Name
(RefSeq) Transitional endoplasmic reticulum ATPase,putative
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
tbg
Trypanosoma brucei gambiense
Pathway
tbg04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
TbgDal_X7000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbg03019
]
TbgDal_X7000
03009 Ribosome biogenesis [BR:
tbg03009
]
TbgDal_X7000
04131 Membrane trafficking [BR:
tbg04131
]
TbgDal_X7000
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tbg04147
]
TbgDal_X7000
Messenger RNA biogenesis [BR:
tbg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
TbgDal_X7000
Ribosome biogenesis [BR:
tbg03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
TbgDal_X7000
Membrane trafficking [BR:
tbg04131
]
SNARE
SNARE associated proteins
Others
TbgDal_X7000
Autophagy
Aggrephagy
Other aggrephagy associated proteins
TbgDal_X7000
Exosome [BR:
tbg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
TbgDal_X7000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_33
AAA_5
AAA_2
TIP49
AAA_14
CDC48_2
RNA_helicase
AAA_22
AAA_17
Mg_chelatase
NPHP3_N
AAA_28
nSTAND3
Parvo_NS1
IstB_IS21
Zeta_toxin
ABC_tran
AAA_18
ATPase_2
AAA_7
Vps4_C
NACHT
NB-ARC
Viral_helicase1
ResIII
ORC-CDC6-like
RCF1-5-like_lid
Molydop_binding
Motif
Other DBs
NCBI-GeneID:
23865805
NCBI-ProteinID:
XP_011777878
UniProt:
D0A2X0
LinkDB
All DBs
Position
10:complement(1378736..1381078)
Genome browser
AA seq
780 aa
AA seq
DB search
MSAKAQQVKQQKLNRLIADDLAEDDNSVVVLNAKRMDELSIFRGDTVKLKGKKNRSTICI
AMSDENCPEGSIMVNKVTRRNIRILLGDLITVSSHSNVPYGNHVHVLPIDDTVKNLTGDL
FETFLKPYFLEAYRPVKTGDLFICRGAMRSVEFKVVEVDPGDCCIVAPETVVHCEGDPIR
REDEERLDDVGYDDIGGCRRQLVQIREMVELPIRHPELFKSIGIKPPRGILMYGPPGSGK
TLIARAVANETGAFFFLINGPEIMSKMAGESEGNLRNAFVESEKNAPAIIFIDEIDSIAP
KREKAQGEVEKRIVSQLLTLMDGLKGRSQVIVMAATNRPNAIDPALRRFGRFDREIDIGV
PDEIGRLEILRIHTKNMKLDPNVDVEKIAKDSHGYVGADLAQLCTEAAMQCVREKMAVVD
WDDETIDAEVLDSMSVTNNHFLDALSKMNPSALRETQVETPNVTWSDVGGLLDVKRELQE
LVQYPVEFPWKFEKYGISAPKGVLFYGPPGCGKTLLAKAIATECQANFISIKGPELLTMW
FGESEANVRDVFDKARAAAPCVLFFDELDSVARSRGHSGDGGASDRVINQILTEMDGMNS
KKNVFIIGATNRPDVLDPAVMRPGRLDQLIYIPLPDKASRVAILKASFRKSPLAPDVDLD
QLAAATHGFSGADLAGICQRACKLAIRESIAKEIQLEEARANGVLNEDQDIDPVPQITRL
HVEEAMRGARRSVSDADIRKYELFATSLQQSRAFGNVSLDPGNQGGAGGDAGAGDDDLYS
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctaaggcgcaacaagtgaagcagcagaaattgaacagattgattgcggatgac
cttgccgaagacgacaacagcgtggtggtgctcaacgcgaagcgcatggacgaactgagc
atattccgtggagacacagtgaagctgaaagggaaaaaaaaccgctccacaatttgcatt
gctatgagtgatgaaaactgccctgaagggtcgatcatggtgaacaaagttacacggcga
aacatccgtattctccttggagatctaattaccgtcagcagccacagcaatgtgccgtat
gggaatcatgttcacgttcttcctattgacgacaccgtaaagaacctaacaggcgacctg
ttcgaaacattcctcaaaccatattttctggaggcctatcgacccgtgaaaacaggagat
ttattcatttgccgtggggcgatgcgctcggtagagtttaaggtggtagaggtggaccct
ggggactgctgtatagttgctcctgaaacagtggttcattgtgaaggcgaccccatccgc
cgcgaggatgaggagcggttggatgatgtgggctacgatgacattggtggctgccgcagg
cagctggtgcaaatccgtgaaatggttgaacttcccattcgccaccccgagcttttcaag
agcattggcataaaaccccctcgtggtattctcatgtacggcccccccggaagcggcaaa
actcttattgctcgggctgtcgctaacgaaaccggtgcgttcttctttttgatcaacggg
ccggagattatgagcaagatggccggcgagtcggagggtaacctgcgcaacgcattcgtg
gagtcagagaagaatgcccctgcaattatttttattgacgaaatagactcaatcgccccg
aagcgcgaaaaagcgcaaggcgaagtggaaaaacgtatcgtctcgcaacttctgacgctc
atggacgggctgaaagggcggtcgcaggttattgttatggcagcaaccaatcggccaaat
gcaattgaccctgcgcttcgccgttttggtcgcttcgaccgggagatcgacattggtgtt
cccgatgaaattgggcgtctcgagatcctccgcatccacacaaaaaatatgaagctcgat
ccaaatgtagacgtggaaaagattgctaaggacagtcatggatacgttggtgctgatttg
gcgcaactctgcactgaggcagcaatgcagtgtgtccgtgaaaagatggccgttgtggac
tgggacgatgaaacaattgatgccgaagttttggattccatgtctgtaacaaataatcat
ttcttggatgcactaagcaaaatgaatccctctgctcttcgtgagacgcaagtggagact
cccaacgtcacgtggagcgatgtcggtggtcttttggatgtgaagagggagttgcaggag
cttgttcagtatccagtagagttcccgtggaaattcgagaagtatggaatctccgccccg
aagggtgtgcttttttatggaccaccaggttgcggtaaaacactgctagcgaaggctatc
gctacggaatgtcaggcaaacttcatctccatcaaggggccggaactgctaacgatgtgg
tttggtgaatctgaggctaatgtaagagacgtgtttgacaaggcaagggctgctgctccg
tgtgtgctcttcttcgatgaactggattccgtggcgcggtcccgcggtcacagtggtgat
gggggggcaagcgaccgtgtcatcaaccagatccttactgaaatggacggtatgaacagt
aagaagaatgtgtttattattggagcaaccaaccgcccggatgtgttggaccctgcggta
atgcgcccaggccgccttgatcagctcatttatattccactgcccgacaaggcgtcgcgt
gtggcaatccttaaagccagtttccgcaaatcgcccttggcgcctgatgttgatttggac
cagttggctgccgccacgcacgggttttccggtgcggatctggctggtatttgtcagcgg
gcatgcaaactagccattagggagtccattgcaaaggaaattcaacttgaggaagcaaga
gcgaacggtgtccttaatgaagatcaggatattgacccggtaccgcaaattactcgattg
cacgttgaagaggccatgcgcggcgctcgtcgctctgtcagtgacgctgacatccgcaag
tacgaacttttcgccacgtcgcttcagcagtcacgtgcattcggtaacgtgagtttggac
cccggtaatcagggcggagcgggaggtgatgccggtgcaggagatgacgatctctatagt
tga
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