Trypanosoma brucei gambiense: TbgDal_X7640
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Entry
TbgDal_X7640 CDS
T06526
Name
(RefSeq) ATP-dependent DEAD/H RNA helicase, putative
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
tbg
Trypanosoma brucei gambiense
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tbg03041
]
TbgDal_X7640
03009 Ribosome biogenesis [BR:
tbg03009
]
TbgDal_X7640
Enzymes [BR:
tbg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TbgDal_X7640
Spliceosome [BR:
tbg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
TbgDal_X7640
Ribosome biogenesis [BR:
tbg03009
]
Eukaryotic type
90S particles
Helicases
TbgDal_X7640
Pre-60S particles
TbgDal_X7640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
23865872
NCBI-ProteinID:
XP_011777939
UniProt:
D0A331
LinkDB
All DBs
Position
10:complement(<1535740..>1537554)
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AA seq
604 aa
AA seq
DB search
MGVDDVGSAEEIPEKKRRRMRRHRPKRRISQATEADDETLTFVGEEGGEEQQEYPVDEEK
AASMHDVEGETSGRRKRQREEEPGKLEQPETNGPPIKVSRDREKYPPVSDYRSLKLNPHI
VTALENDFKFQELTGIQGRCIPAALAGRDLLAEAKTGSGKTLAFLIPIVEIITRVGFRQR
SGTAAIIIGPTRELCLQIEGVLLKLLKHFNGSVTFLCCIGGISRKQEAFKLVSGMMVVMA
TPGRLLDHLKLTTDWLTKNLLVLAVDEADRVLDNGFEDDMREIVSLLPRQRQTFLFSATQ
TTRVEQLARVSFYRPPLFISMKRKEDKATVDTLEQGYVICPSQQRLLVLYHFVRRNLKKK
VIVFFSSRNAVSFHCELFNYIDVPCVAFHGKQKQHQRSATYMQFCNAPSGVLFTTDVAAR
GLDIPQVDWIVQFDPPDDPVKYVHRVGRTARAGRRGNALMFLLPQEKLFLKYLHDDAHVS
VSEYTFDLNKVKGNVAEQLEQLVSANYYLRSSARLAYEGYLLSYSSSQLKNVFDIHNLDL
AAVAKGFALSEPPPLKLDLSQSAAHMSKKSRHEFRRMMESKDSQRRRLNETTLKKRRENI
SGEW
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtggatgacgtaggctctgcggaggagataccggagaagaaacggaggcgcatg
cgacgccatcgcccgaaacgtaggataagtcaagcaactgaggcggacgacgaaaccctt
acctttgttggtgaagaaggtggggaagaacagcaggagtacccagtggatgaagaaaag
gcggcatccatgcatgatgttgagggggaaacgtctggacgtcgtaaaaggcaacgagaa
gaggaaccggggaagttagagcaacctgaaaccaacggtccgccaattaaagtttcaagg
gaccgagagaagtatccccctgtttccgactacaggtcgctgaagttaaatcctcacata
gtaactgcattggagaatgacttcaagttccaggagctgacaggcattcagggacgatgc
attcctgctgcccttgccggtcgagatctccttgcagaggcaaagacaggctctggtaaa
actttagcttttcttatcccaatagtggagatcatcacgcgcgtgggttttcgtcagcga
agcggaacggctgcaatcatcattgggccaacgcgtgagctgtgtctccagattgaagga
gtgctgctgaagctgctcaaacactttaacggatcggtaacgttcctctgttgcataggc
ggaataagtcggaagcaagaggcgtttaaacttgtgagtggcatgatggttgtgatggcc
acccctgggcgtctcttggatcatcttaagcttacaacggattggttaacaaagaattta
ctcgttttggccgtcgatgaggcggatcgtgtgcttgacaacggatttgaagatgatatg
cgagaaattgtttctttactgcccaggcagcgacaaacgttcttgttttctgcgactcaa
acaactagggtcgaacagttggctcgcgtgtcgttctaccgaccacccctgttcatttca
atgaagcgtaaggaggacaaggcaaccgttgacacgttggaacagggttatgttatttgt
ccttcacagcagcggttgcttgtactgtatcactttgtcaggcggaatctgaagaagaaa
gtaatcgttttcttcagcagtcgcaatgctgttagttttcactgcgagttgtttaactac
atcgatgttccttgcgttgcctttcacggaaaacaaaaacaacaccagcgttcggccacg
tacatgcagttttgtaacgcccctagcggcgtgctctttaccacagatgtagctgcccgt
ggtctcgacattccgcaggttgattggatcgttcaatttgacccacctgacgaccccgtc
aagtacgtccatcgcgttggccgtaccgcccgtgctggtcgcagagggaatgctcttatg
tttcttcttccccaggagaaactgtttctaaagtatctgcacgacgacgcccatgtgtca
gtgagtgagtacacatttgatcttaataaggtgaagggaaatgtagctgagcagctggag
cagcttgtgagtgccaactactacctgcgcagctccgcacgcctcgcgtatgagggctat
ttgctcagctacagcagctctcagttaaaaaacgtttttgacattcacaacctcgacctc
gccgcagtcgccaaaggcttcgccctaagtgagccaccaccgctgaagttggatctatcg
cagtccgctgcgcacatgagtaagaagtcgcggcacgaattccgccggatgatggaatcc
aaggatagtcaaaggcggaggctgaacgaaactacgctgaagaagcgccgggagaacatc
agtggtgagtggtag
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