Trypanosoma brucei gambiense: TbgDal_X7820
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Entry
TbgDal_X7820 CDS
T06526
Name
(RefSeq) chaperonin Hsp60, mitochondrial precursor,putative
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
tbg
Trypanosoma brucei gambiense
Pathway
tbg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TbgDal_X7820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbg03019
]
TbgDal_X7820
03110 Chaperones and folding catalysts [BR:
tbg03110
]
TbgDal_X7820
03029 Mitochondrial biogenesis [BR:
tbg03029
]
TbgDal_X7820
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tbg04147
]
TbgDal_X7820
Enzymes [BR:
tbg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
TbgDal_X7820
Messenger RNA biogenesis [BR:
tbg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
TbgDal_X7820
Chaperones and folding catalysts [BR:
tbg03110
]
Heat shock proteins
HSP60 / Chaperonin
TbgDal_X7820
Mitochondrial biogenesis [BR:
tbg03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
TbgDal_X7820
Exosome [BR:
tbg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
TbgDal_X7820
Exosomal proteins of other body fluids (saliva and urine)
TbgDal_X7820
Exosomal proteins of breast cancer cells
TbgDal_X7820
Exosomal proteins of colorectal cancer cells
TbgDal_X7820
Exosomal proteins of bladder cancer cells
TbgDal_X7820
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
23865892
NCBI-ProteinID:
XP_011777957
UniProt:
D0A349
LinkDB
All DBs
Position
10:complement(<1565384..>1567072)
Genome browser
AA seq
562 aa
AA seq
DB search
MFRCVVRFGAKDIRFGTEARQSMLKGVQRAVEAVATTLGPKGRNVIIEQSYGAPKITKDG
VTVAKSIEFKDPFENMGAQLVRQVCNKTNDLAGDGTTTSAVLVASIFSEGIKSIATGTNP
IDMKRGMDRAVEVILKNIESQSRTVTNTENVVQVATISANGDVELGKLIGEAMEKVGKDG
VITTQDGKTLTTELEVVEGMSVDRGYISPYFVTDAKTQKAELEDAFVLVSAKKLNNIHTI
LPVLNHVVRSGRPLLIIADDVESEALTTMIFNKLQGKLKIACVKAPGFGDNKAAMLQDIA
IFSGACVVGEEGSGVELDAEKFDASILGSVKKATITKDDTVLLNGGGDVAMMKERVDLLR
GLIERETSDYNREKLQERLAKLSGGVAVIRVGGASEVEVNEKKDRITDALCSTRAAVQEG
IVPGGGAALLRASKALDGLLQDQSLTADQRTGVQIIRNAVRLPAHRIVANAGREGAVVVE
KVLENTDAAVGYDAQLDRYVNMFEAGIIDPARVVRVALTDAASVASLMMTAEAAVVDLPK
DDAPAAGGMGGMGGMGGMDGMY
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgttccgctgtgtcgtccgttttggtgccaaagacatccgttttggcacggaagcacgt
caatctatgctgaagggcgtacaacgcgctgtggaggctgttgcaacgacccttgggcct
aagggacgtaacgtgattatcgagcaatcgtacggtgctccgaagatcacgaaggatggt
gtaaccgttgcgaagtcgatcgagttcaaggacccgtttgaaaacatgggtgcgcagctc
gtgcggcaggtatgcaataagacaaatgacctcgcgggtgatggaacgacaacatcggct
gtcctcgttgcaagcatctttagcgagggtatcaaatcgattgcaaccgggacgaatccc
attgacatgaagcgtggtatggaccgcgccgtggaggtgatcctgaagaacatcgaatct
cagagccgaacggtaacaaatacggagaacgttgtgcaggttgcgacgatttccgcgaac
ggtgatgttgaactcggcaagctgattggggaggcgatggagaaggtggggaaggatggc
gtgatcacaacacaagatgggaagacattgacgactgagctggaagttgtggaaggcatg
agtgtggaccgcggttacatcagcccgtacttcgtaactgacgcgaagactcagaaggcc
gagcttgaagatgcgttcgtgcttgtgtctgcaaagaagttgaacaacattcatacgatc
ttaccggtgttgaatcacgtggtgcgcagtgggcgaccattgctgatcattgcggatgat
gtggagagtgaggccctgacgacgatgattttcaataaacttcaaggaaagctgaagatt
gcgtgcgtgaaggctccaggtttcggggacaacaaggctgcgatgctgcaagacatcgcc
attttcagtggtgcctgcgttgttggtgaggaaggcagtggtgtggaacttgacgctgag
aaattcgacgccagcatcttggggagtgtgaagaaggcaacaatcacgaaggacgataca
gtactgttgaacggtggtggcgacgttgcgatgatgaaagaacgcgtggacctgctgcgc
gggctcattgagcgcgagacgagtgactataaccgcgagaagcttcaagaacgtcttgca
aaactgagtggtggcgttgccgtaatccgcgttggtggtgcttctgaggtggaggtgaac
gagaagaaggaccgcatcacagatgccctgtgctcgacccgcgctgcggtgcaggaaggc
attgtccctggtggtggcgctgcgttgctgcgtgcgagcaaagcattggacggattacta
caggatcagtcactcaccgctgatcaacggactggcgtgcagatcatccgtaacgcggtg
cggttgcccgcccaccgcattgttgccaatgctggaagggaaggtgctgttgttgttgag
aaggtgctcgagaacactgatgccgctgttggttacgatgcgcagcttgatcgctacgtg
aacatgtttgaagccggaataatcgaccccgcgcgtgtggttcgtgttgcgcttactgac
gctgcgtctgttgccagcctcatgatgacggcagaggccgcggttgtggatttaccgaag
gatgatgcacctgctgcaggtggtatgggaggcatgggtggtatgggaggtatggacggc
atgtattga
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