Trypanosoma brucei gambiense: TbgDal_X8110
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Entry
TbgDal_X8110 CDS
T06526
Name
(RefSeq) ATP-dependent DEAD/H RNA helicase HEL64,putative
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
tbg
Trypanosoma brucei gambiense
Pathway
tbg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TbgDal_X8110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tbg03041
]
TbgDal_X8110
03009 Ribosome biogenesis [BR:
tbg03009
]
TbgDal_X8110
Enzymes [BR:
tbg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TbgDal_X8110
Spliceosome [BR:
tbg03041
]
Complex A
U1 snRNP components
U1 related factors
TbgDal_X8110
Complex B
TbgDal_X8110
Ribosome biogenesis [BR:
tbg03009
]
Eukaryotic type
Pre-60S particles
Helicases
TbgDal_X8110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
PRAI
AAA_30
DUF6493
Cas3-like_C_2
ERCC3_RAD25_C
Ndufs5
Motif
Other DBs
NCBI-GeneID:
23865925
NCBI-ProteinID:
XP_011777986
UniProt:
D0A378
LinkDB
All DBs
Position
10:1626630..1628336
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AA seq
568 aa
AA seq
DB search
MEETYSPFTGRQGQYNQGYNGGGRRDSRGGMGERIKPVDWGNVSLVPGNWKVLDGKAIKK
AGEIKTSTPEAGQLSEEEATKWREEHVITIFGDDCPPPMSSFDHLRGIVPPYLLKKLTAQ
NFTAPTPVQAQSWPVLLSGRDLVGVAKTGSGKTLGFMVPALAHIAVQEPLRSGDGPMVVV
LAPTRELAQQIEEETKKVIPGDVYCGCVYGGAPKGPQLGLLRRGVHILVATPGRLIDFLD
IKRINLHRVTYLVLDEADRMLDMGFEPQVRKICGQIRPDRQTVMFSATWPREIQRLAAEF
QKQWIRISVGSTELQANKDVTQRFILTQEFAKQDELRKLMQEHREERVLVFCKMKRTADE
LERQLRRWGYDAMAIHGDKEQRQREFILARFRKDPRLCLVATDVAARGLDIKQLETVINY
DFPMQIDDYVHRIGRTGRAGAKGDAFTLITKKEAQITPSVLKELIGILERAQQEIPDWMI
EWNAQQPRYQVKRNRGMNGFGRHQSAPFLRNGHRPSFSANGNYSAHGNGTFGLGKHNDDA
VPFSSSAIQYKRFDSDDEAEPSRKKYAR
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggaggagacgtacagtccctttacgggacgtcaaggccagtacaatcagggctacaat
ggtggagggcgacgagatagccgcggcggtatgggagaaagaataaaacccgttgactgg
gggaatgtttctctcgttcccggaaactggaaggttctcgatggtaaggcgatcaaaaag
gcaggggagataaagacatccaccccagaagcgggacaactcagcgaggaggaggcgacg
aaatggcgagaagaacatgtgatcaccatatttggtgatgattgtcctccacctatgtca
tcgtttgatcacctgcgtggaatcgttccaccataccttctaaagaagctcaccgcccag
aatttcactgcaccaactcccgtgcaagcgcagtcatggcccgttcttctatctggtcgt
gaccttgtgggggttgcgaagacaggctccggaaagacgcttggcttcatggtccctgcc
ctcgcccacattgcagtgcaggaacccctacgctccggtgacggtccaatggttgttgta
ctggctcccacccgcgaactcgctcagcagattgaagaagaaacaaaaaaggttatcccc
ggggacgtgtattgcggttgcgtttatggaggagcaccaaaaggaccccagcttgggttg
ctgcggagaggtgtgcacattctcgtcgccacaccaggtcgtttgatagacttcttggat
attaaacgcattaacttgcatcgtgtcacctatctcgttctagatgaagcagatcgcatg
cttgatatgggatttgagccgcaggttcgcaaaatatgcggccagataaggccagaccgg
cagacagtcatgttctccgccacttggccacgtgagattcagcgactggcagcagaattt
cagaagcagtggatacgcatcagtgtgggcagtacggaacttcaggctaacaaggacgtc
actcagcgtttcattctcacacaagagtttgcaaagcaggacgagttgaggaagctcatg
caagaacatcgggaggaacgcgtgctggttttctgcaagatgaagcggactgcggatgag
ctggagcggcaactaagacgatggggctacgatgcaatggctattcatggtgacaaggag
cagcggcagagggagttcatcctagcgaggttccgtaaagatccacgattgtgccttgtc
gccacagacgttgctgctcgaggtctggacatcaaacaattggaaactgttataaactac
gacttccccatgcagatcgacgactacgtacatcgtattggccgcacaggccgtgcaggc
gcgaagggagatgcgtttacgcttatcacgaagaaggaggctcaaataacaccttcagtg
ttgaaggaacttattgggatcctggagcgcgcacaacaggaaatacctgattggatgatc
gaatggaacgcgcaacagccgagataccaggtgaagcggaatcgcggtatgaacgggttt
ggaagacatcaaagcgctcccttcctgcgtaacggtcaccgcccatcgttctcagcgaac
gggaattatagtgctcacggaaatggtacatttggccttggaaagcacaacgacgacgct
gttcccttctcgtcatccgctattcaatacaagcgatttgacagtgacgacgaggcggaa
ccgtcccgcaagaaatacgcgagatag
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