Trypanosoma brucei gambiense: TbgDal_X9130
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Entry
TbgDal_X9130 CDS
T06526
Name
(RefSeq) RRP41p homologue, putative
KO
K11600
exosome complex component RRP41
Organism
tbg
Trypanosoma brucei gambiense
Pathway
tbg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TbgDal_X9130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbg03019
]
TbgDal_X9130
Messenger RNA biogenesis [BR:
tbg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
TbgDal_X9130
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
TbgDal_X9130
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
DUF7104
Motif
Other DBs
NCBI-GeneID:
23866036
NCBI-ProteinID:
XP_011778086
UniProt:
D0A3H8
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Position
10:complement(1815621..1816379)
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AA seq
252 aa
AA seq
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MPVIKEYINPAGLRLDGRRPNEPRRLALEFGKISGCDGCCTVVSGLSHVCATVYGPREVS
NRLDGKYNEVTITCDVVVAAFAGERRREQQRYSRLSEDISASVLDVARSVVLLSQYPNSQ
IHICIEVLKQDGSDKAACINAACLALIDASIAMRDVVYTQTVGLIEGFDVVDLTTEEIHS
QCPSICITVQGHDPTNIVWMESNSRLAPEVITRLVKVAQKASTDVFETALRGPLEEHAAT
VLRLQANLGNIE
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgattaaggagtacatcaatcccgctgggctacgcttggacgggcgccgacca
aacgagccgcggcggctagcgttagagttcgggaagatttcaggctgcgacggctgctgt
acggtggtgagtggactatcgcatgtctgtgccactgtttacggtcccagggaagtttcc
aaccgcttggacgggaaatataatgaggtgacaataacctgtgatgttgttgtcgctgcc
ttcgccggagagcgcaggcgcgaacagcagcggtactcaaggctctctgaggatattagc
gcatcagtactggatgttgctcgctctgttgtgttgttatcgcagtatccaaactcacag
attcacatttgcattgaggtgcttaaacaggatggtagtgacaaggctgcttgtatcaat
gcagcgtgtttggcccttatcgatgcaagcattgccatgagggatgttgtgtacacgcaa
acagtggggctgatagagggctttgacgttgtggacctcaccacagaggaaatacactcg
caatgcccctctatatgcataacggtgcagggacacgatcccactaacatagtgtggatg
gagtcgaatagccgtctcgcgccggaagtaattaccagacttgtaaaagtggcgcagaaa
gcctcgactgacgtgtttgaaaccgcgcttcggggtccgctggaggagcacgccgctacg
gttctccgattgcaagcgaatttaggtaacatcgagtaa
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