KEGG   Trypanosoma brucei gambiense: TbgDal_X9780
Entry
TbgDal_X9780      CDS       T06526                                 
Name
(RefSeq) ATPase, putative
  KO
K10756  replication factor C subunit 3/5
Organism
tbg  Trypanosoma brucei gambiense
Pathway
tbg03030  DNA replication
tbg03410  Base excision repair
tbg03420  Nucleotide excision repair
tbg03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tbg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TbgDal_X9780
   03410 Base excision repair
    TbgDal_X9780
   03420 Nucleotide excision repair
    TbgDal_X9780
   03430 Mismatch repair
    TbgDal_X9780
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tbg03032]
    TbgDal_X9780
   03036 Chromosome and associated proteins [BR:tbg03036]
    TbgDal_X9780
   03400 DNA repair and recombination proteins [BR:tbg03400]
    TbgDal_X9780
DNA replication proteins [BR:tbg03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    TbgDal_X9780
  DNA Replication Termination Factors
   ELG1-RFC complex
    TbgDal_X9780
Chromosome and associated proteins [BR:tbg03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    TbgDal_X9780
DNA repair and recombination proteins [BR:tbg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     TbgDal_X9780
  Check point factors
   HRAD17(Rad24)-RFC complex
    TbgDal_X9780
SSDB
Motif
Pfam: RFC_C DNA_pol3_delta2 RCF1-5-like_lid AAA Rad17 AAA_16 AAA_24 Sigma54_activ_2 AAA_5 Mg_chelatase AAA_22 RuvB_N DUF815 AAA_30
Other DBs
NCBI-GeneID: 23866107
NCBI-ProteinID: XP_011778151
UniProt: D0A3P3
LinkDB
Position
10:complement(1928088..1929137)
AA seq 349 aa
MLWVDKYRPRTLDDVDLYPELTEVLKRLAESQDLPHLLLYGPSGTGKKTRAMAVLQQVYG
PSVYSLRLEHKSVQVTDSKVVDIATLSSPHHIDINPSDAGNHDRVVVMQMIREIAQTVPL
QSGTPGAAKYKVVVLNEVDKMGRAAQHALRRTMEKYMATCRLVLICNSTSRLIAPLRSRC
LAVRVPSHSQENITKVIRTVCEKEGRMPPSPAFLAALSNQSEGNLRRAQLMLEAAAMTKV
DFSGSGANIPQADWQVFLEEIANDILTEQTPKKLFEIRGKFYDLLGQCISGEVIMRGVLE
ALLNSVKPAMRPAVVSLAAKYDHNMKLGTKPILHLEAFASGVMQLLKRN
NT seq 1050 nt   +upstreamnt  +downstreamnt
atgctgtgggtcgacaagtaccgcccaaggactcttgatgacgtagatttgtatccggag
cttaccgaagtacttaagcgtttggccgagtcgcaagacctcccacacctgttattgtac
ggaccctctggaaccggcaagaagacgcgggccatggcagtgttgcagcaggtgtacggt
ccatccgtttactcgctacgtctggaacacaagtctgtgcaagtgacagatagcaaagtc
gttgatatagcgacactgagttccccacaccacattgacatcaacccttccgatgcaggg
aatcacgatcgcgtagtcgtgatgcaaatgatacgcgagattgcgcagaccgttcccctg
cagtctggcacaccaggcgctgcgaagtacaaagttgtggtgctcaacgaggtggataaa
atgggacgggcagctcagcatgccctccggcggacaatggaaaagtacatggcgacgtgc
agattggtgctgatctgcaactcaacctcacgtcttatcgcaccccttcgctctcgttgc
cttgctgtccgtgttccttcccattcacaggaaaacataaccaaagtcattcgaactgtg
tgtgaaaaggagggccggatgcccccatcacccgcatttttggctgcccttagcaaccag
tccgaaggaaacttacgacgtgcgcaactgatgctggaggcagcagccatgacaaaagtt
gatttttcaggcagtggagccaacattccgcaggctgattggcaggtctttcttgaggaa
attgccaacgacattctcacggaacagacaccaaagaagctgtttgaaattcgtggaaag
ttttacgatctgctcgggcagtgcatctcaggtgaggtaattatgcgaggcgtcttggaa
gccttgcttaattctgttaagccggcaatgcgaccggctgttgtttctcttgcggcgaag
tacgatcacaacatgaagcttggcaccaaacccattctccatctggaggcattcgcatca
ggagtgatgcaacttctcaagcgaaactga

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