Trypanosoma brucei gambiense: TbgDal_X9980
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Entry
TbgDal_X9980 CDS
T06526
Name
(RefSeq) nuclear pore complex protein (NUP155), putative
KO
K14312
nuclear pore complex protein Nup155
Organism
tbg
Trypanosoma brucei gambiense
Pathway
tbg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
TbgDal_X9980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbg03019
]
TbgDal_X9980
Messenger RNA biogenesis [BR:
tbg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
TbgDal_X9980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
23866129
NCBI-ProteinID:
XP_011778171
UniProt:
D0A3R3
LinkDB
All DBs
Position
10:complement(1965979..1969956)
Genome browser
AA seq
1325 aa
AA seq
DB search
MEVRDDNPSRIEDATKRAVEEIISAEIRSAAISKDNTISPCGHVSSHPFALTTFDTSSTL
PAFLPLTGVTWPEAVKAVWKTFRANSTVGLFPELSRAWITIDNKLLLWNFGTGRDFFLFD
EVPELIVAVGTPVLPIAGVFQAHITYVLPVSTPKAVHLLGLCVFGGGPLKKAELYVVSLG
FSVMAPALFTKLVGVKELGRIFAAGADGCLYEVKYAKEDTAFLPKLRLVNCSLMFGSVPV
LGAVSSLISAIKQTWAKERPALRDVAIEAKRKLLFTLNSESTISLWRITNDGLSQLATVR
GGALGGTNRTSVWSGGAGVELARIFCATSSDDSCSLIAVAANGEQYRYVCQDGLWGGADA
SLSLRESLGSYIPQGREVTVCFASEGISVVCHAEKSEGGYSPDSVTVASSHKGILQPHHN
CRDIVAQFEPEATCMTRVDAISEVPVEGGVSPNELCSQVSCSPRQFVFLHRHGVSTFIKL
RPVDTLHMIIASSSEQVRDSLLQRLSSIYSASDYCCMLVQIAVGCTNVPVTVDGPYVERG
DANASFSPAGKGNGKSQIPLSVEQLGRQLNETPSQEVQRIAREILRSAMAPSWYEGPGPD
DGTRHIVVQVSPFASGVLAYISRALYAVWNTALEGVTMRELAVVETALSSVVRLLNSLKR
DVWSDKFVQPAVPFQWDKGKVTLVLPPHRSSISSYDIKMLQSALLCSSHTLCERVLQTIK
FLKQTAAVPPMAEDGKVTVAQIVSDQSVAHRMARHVGKVVLSSEKGAGYLPQDGVGSVMQ
LQLECPYFFNSIDVQEYNVRVELERLLSANGENFHAFPEGKMAEWESSVSIMAASLWYSG
ALLDICQQLRALKKEGTAVKLLLHAACQLDPNNSAFKTYLAEKSGNLNQAVSSAVGSTYQ
QKLKVLGEVVSTLENAWNTHRSTVDGLLGGPLSSGAIWQIEPTDELAHCYLFDWLCLPRD
DAHIKAMLRETLVAAHSPFIEAYLQRNISTLGEQYVRYLRKTKKNHALAIEVCASVVHAP
LTGIPREERISYRLRCLAEAKGSAEESKSDQLKSLEQRIGLMEAQLHLSKIICEFINSGH
SHLDRRVAVDGRGLMTERQIALEQMEMVENHVLSTVQLLQVAGMFCAYGGAEVQLDVLNA
ANVTDSSLHAACIDRCFQRKDATVEEIARRVIGKCMRTIASPLCHVVKILEAYAFQRSPE
GSTLTVDVLYDCGVEHNVIFSTIAAIFDKRDFLTAPCETFDQSAVTDAFLVHSLAAALHR
AVFASHISSVQMYFLGNALNTVREGISKVAIQPGDERSIRALSAAEGLLEQCNLALNRAS
SRFTF
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atggaagtacgagatgataacccgagtaggatagaggacgccacaaagagagcagttgag
gaaattatcagtgcggagatccgttccgctgcgattagcaaagacaacactatttcgcca
tgcggtcacgtctcttcccacccatttgctctcaccacatttgacacgtcttccacgctt
ccggcatttcttccactaacgggggtaacttggccggaagctgtcaaggccgtgtggaaa
acattcagggcgaattccactgttggtctattcccagaactttcaagggcatggataacg
attgacaacaagctgcttttgtggaattttgggacggggagggacttctttctcttcgat
gaagtgcctgagcttatcgtagccgttggaacccccgtcttacccattgccggcgttttt
caagctcacatcacctatgttctcccagtgtcaaccccaaaagcagttcatctactgggg
ttatgtgtttttggaggtggtcctttgaagaaggcggaactctacgtggtgagccttgga
ttctctgtgatggcaccggcgctctttacaaagcttgttggtgtcaaagagctgggtagg
atctttgctgcaggcgcagatgggtgtctctacgaggttaagtacgcaaaggaggacaca
gctttccttccgaaacttaggctcgttaattgttcactaatgtttggtagtgttccggtt
ctgggagccgtaagctcattgatcagtgcgattaaacagacatgggcgaaagagagacct
gcactgcgcgacgtcgccatagaggcgaagcgtaagctcctgtttaccctgaattctgag
agcacaatttcattgtggaggataacgaacgatggcctaagtcagctggccacagtcaga
gggggggctttggggggaaccaatcggacatcagtgtggtcgggaggagcgggtgttgaa
cttgccaggatattttgcgctacgtcatccgatgacagctgttcgcttattgccgttgca
gctaatggggaacagtaccgctatgtctgccaagacggtttgtggggtggtgccgacgct
agtctttccctgcgcgagagcttggggtcgtacattccccaaggccgtgaggttaccgtt
tgctttgcttccgaaggaatctcagttgtatgccacgcagaaaagtcggaaggaggttat
tcgcccgattctgtgactgtggcttcttcacacaaggggatattgcagccgcatcacaac
tgtcgtgacatcgtcgcccagtttgagccagaagcaacatgcatgacacgagttgacgct
atttctgaggttcccgtagaaggcggtgtgagtcccaacgagttgtgctctcaggtttca
tgttccccaaggcagtttgtttttcttcatcgccatggagtttcaactttcataaaactc
cgacccgtggatacactccacatgataatcgcgtcgtcaagcgaacaagtgcgtgacagt
ctccttcagcggctttcttctatttatagcgcatcggactattgctgtatgcttgtacaa
attgctgttggttgcacgaatgtgccggtcacagtagatggtccatacgtcgagagaggt
gatgcaaacgcatccttttctccggcagggaagggtaacggcaagtcacagattcctctg
tcggtagagcaattaggccgccagctgaacgaaacgccctctcaagaggttcagagaatt
gcacgtgagatactccgtagtgcaatggcgccgagttggtatgaaggaccaggccccgac
gacggtacccgccacattgtcgttcaagtatcgcctttcgcctcgggcgttttggcatat
atttcaagggctctctacgccgtgtggaatacggcgttggaaggtgttacaatgcgtgaa
ttggcggttgtggaaacggcactctcctctgtagttcgattgttgaacagcctgaagaga
gacgtgtggtccgacaaatttgtccagccggctgtaccgttccagtgggacaaaggaaag
gtaacgctggtgcttccaccccatcggtcgtcgatatcatcatacgacatcaagatgttg
cagtctgcgcttctgtgctcctctcacactttatgtgagcgagtcttacagacaatcaaa
tttctgaaacagacggctgccgtcccgccaatggcggaagatggtaaggtaacagtagca
caaattgtgagcgaccaatcagtggcacaccgcatggcgcggcacgttggaaaagtggtg
ctttcctccgaaaagggcgcaggttatttgccgcaggacggcgttggttcagtgatgcaa
ctgcagctggagtgcccgtactttttcaactccatcgatgtgcaagaatacaatgtgcgg
gtcgaacttgagaggttactgtccgccaatggagaaaacttccacgcgtttccagagggt
aaaatggcagagtgggaatcatctgtctctatcatggccgcttcattgtggtactccggg
gcgttgcttgatatatgtcagcaactgagggcgcttaaaaaggagggcactgctgtcaaa
ctcctactccacgctgcgtgtcaattggatccgaataactccgctttcaagacctacctt
gcggagaaaagcggcaatctgaatcaggcagtgagctcagctgtcggttccacctaccaa
cagaagttaaaggtgctgggtgaggttgtcagcactctggagaacgcttggaacacacac
cgtagtactgtcgatggccttcttgggggtcctttgtcctccggcgctatctggcagatc
gagcctacggacgaattggctcattgttacctattcgactggttgtgtttgcctcgtgac
gatgcacacatcaaggcaatgcttagagagacgttagtggccgcgcattccccatttatc
gaggcgtatcttcaacgcaacatatcgactctgggggagcaatatgttcgatacttgcga
aagactaaaaaaaatcatgcccttgccatcgaagtttgtgcttctgtcgttcacgcaccg
ctaacaggaattccaagagaagaacgaatttcctacaggcttcgctgcctggctgaggcg
aaggggagcgctgaagagtcaaaatcagatcaactcaaaagtcttgagcagcgcataggg
ttaatggaggcacagcttcacctgtctaaaatcatttgtgaatttatcaacagcggacat
tctcatctcgataggcgagttgcagtggatggccggggtctcatgacggaacggcaaatt
gcattggaacagatggagatggtggagaaccatgttctctctactgttcagctgctgcaa
gttgcgggtatgttctgcgcatacggcggagcggaggtccaacttgatgtcctgaacgcg
gccaacgtgaccgattcatcgcttcacgccgcgtgcatcgaccgctgtttccagcggaaa
gatgcgactgtggaagagatagcaaggcgggttattggaaagtgcatgcgtacgatcgcc
tctcccctgtgtcatgtggtcaagatattggaagcatatgccttccagcggtcacctgaa
gggtccacactgaccgtggacgttctctacgactgtggtgtggagcacaacgtaatattc
tcgacgatcgccgcgatttttgataaaagggactttcttaccgctccttgtgaaacattt
gaccaatctgcagttactgatgcgttcttagtgcattcgctagctgccgctcttcatcgt
gcggtgttcgcttcgcacatcagctccgttcagatgtactttctaggtaacgctctaaac
acggtgcgcgagggcatcagcaaggtcgccatccaacccggtgatgaacgcagtatccgg
gcattgagcgctgcggagggattgctcgaacagtgcaaccttgccctgaatcgtgccagt
tccaggtttactttctag
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