Trypanosoma brucei gambiense: TbgDal_XI10720
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Entry
TbgDal_XI10720 CDS
T06526
Name
(RefSeq) replication factor C, subunit 4, putative
KO
K10755
replication factor C subunit 2/4
Organism
tbg
Trypanosoma brucei gambiense
Pathway
tbg03030
DNA replication
tbg03410
Base excision repair
tbg03420
Nucleotide excision repair
tbg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TbgDal_XI10720
03410 Base excision repair
TbgDal_XI10720
03420 Nucleotide excision repair
TbgDal_XI10720
03430 Mismatch repair
TbgDal_XI10720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tbg03032
]
TbgDal_XI10720
03036 Chromosome and associated proteins [BR:
tbg03036
]
TbgDal_XI10720
03400 DNA repair and recombination proteins [BR:
tbg03400
]
TbgDal_XI10720
DNA replication proteins [BR:
tbg03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
TbgDal_XI10720
DNA Replication Termination Factors
ELG1-RFC complex
TbgDal_XI10720
Chromosome and associated proteins [BR:
tbg03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
TbgDal_XI10720
DNA repair and recombination proteins [BR:
tbg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
TbgDal_XI10720
Check point factors
HRAD17(Rad24)-RFC complex
TbgDal_XI10720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_16
AAA_30
AAA_24
Rad17
Mg_chelatase
AAA_11
DEAD
RCF1-5-like_lid
AAA_assoc_2
AAA_19
RuvB_N
AAA_14
AAA_25
AAA_5
SLFN-g3_helicase
nSTAND3
AAA_18
RNA_helicase
ABC_tran
DNAX_ATPase_lid
KTI12
FtsK_SpoIIIE
DUF3834
AAA_23
Motif
Other DBs
NCBI-GeneID:
23866213
NCBI-ProteinID:
XP_011780217
UniProt:
D0A8F2
LinkDB
All DBs
Position
11:complement(2584218..2585243)
Genome browser
AA seq
341 aa
AA seq
DB search
MTQQTVPWVEKYRPMSMEDIVGNADAVARLQVIAREGNLPNLLLCGPPGTGKTTSMLCLA
RSLLSDPDGGGSNNNALKDAVLELNASDDRGLDVVREKIKLFAQTKKTLPQRVGDSNNRK
INLHKIVILDEADSMTPAAQQALRRTIELHSSTTRFAFACNNSHKIIEPIQSRCAVVRFR
KLSHTDILRRLMYIIQQENVAYTDDGLEALLYLADGDLRSAVNALQATCSGYSLVNADNV
FKVCDLPHPQLVEAILTSCVKQDLAAAHKEMQRLLGRGYATSDVISTFFRAAQNVKLFRD
EKQQLQVLRIIGEVTMRVAEGVGTPLQLASMVCRIIVATKS
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgacacaacagacagtaccttgggtggagaaataccgcccgatgtcgatggaagacatt
gttggaaatgctgatgccgttgcacggttgcaagttatcgcgcgcgaggggaaccttcca
aatctattgctctgtgggccgccgggcacagggaagaccacaagtatgctatgcctcgct
cgaagcctcctcagtgatccggatggtggtggctcaaacaacaacgcactaaaggatgcc
gtgttggagcttaatgccagcgatgatcggggccttgacgtggtgcgggagaaaatcaaa
cttttcgcgcagacgaagaaaaccctcccgcagagagtgggtgactcgaacaaccggaaa
atcaatctgcacaaaattgtaattcttgacgaggcagacagcatgacacccgctgctcaa
caggccctgcgccgcaccattgagcttcactccagtacgacgaggtttgcgtttgcgtgt
aataacagccataaaattatagaaccaattcaatcacgctgtgccgtagtgcgcttcaga
aaactctcccacactgatatcctgaggcgcctcatgtacatcattcaacaagagaatgtt
gcatacactgatgacgggctcgaggcactgctctatctcgctgacggtgaccttcgttcc
gctgtgaatgcgctgcaggcaacgtgttcgggatacagtctggtgaatgcggataatgtg
ttcaaggtgtgcgacttacctcatccccagcttgttgaagccatattgactagctgtgtg
aaacaagaccttgccgcagcgcataaggagatgcagcggcttttgggtcgtggttatgct
acctccgatgttatctcgacgttcttccgcgccgctcagaatgttaaattattccgcgac
gagaagcagcaactacaagttctgcgtattataggagaggtgacgatgagggtagctgag
ggtgtaggcacaccgttgcaactcgcgtcgatggtgtgtagaatcattgtcgcaacgaag
tcgtaa
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