KEGG   Trypanosoma brucei gambiense: TbgDal_XI11750
Entry
TbgDal_XI11750    CDS       T06526                                 
Name
(RefSeq) hypothetical protein, conserved
  KO
K14554  U3 small nucleolar RNA-associated protein 21
Organism
tbg  Trypanosoma brucei gambiense
Pathway
tbg03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:tbg00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    TbgDal_XI11750
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tbg03009]
    TbgDal_XI11750
Ribosome biogenesis [BR:tbg03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    TbgDal_XI11750
SSDB
Motif
Pfam: Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 Utp21 Beta-prop_IFT122_1st Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR5 WD40 WD40_CDC20-Fz Beta-prop_WDR3_2nd EIF3I Beta-prop_VPS8 WDR55 Beta-prop_EML ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd WD40_Gbeta Beta-prop_TEP1_C CFAP251_N NBCH_WD40 Beta-prop_TEP1_2nd Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st PQQ_2 Beta-prop_WDR75_1st TRM82_WD Beta-prop_Aladin Beta-prop_CAF1B_HIR1 PAC11 Beta-prop_NOL10_N Beta-prop_WDR19_1st WD40_MABP1-WDR62_2nd Beta-prop_Vps41 PEP5_VPS11_N WDR54 TP_0783 Utp12 Beta-prop_EMC1_N SHKBP1_KCTD3_C tRNA_edit RMC1_N
Other DBs
NCBI-GeneID: 23866327
NCBI-ProteinID: XP_011780320
LinkDB
Position
11:<2767545..>2770865
AA seq 1106 aa
MWCTVEGEETWFMREQCGKGIEVSLNTATCLASPRRKMHLLVVPRIHTFSAPLCMRTFDP
VAPNVEKKKGRKEGRKEESRKDRAGAVSCVKGRNICLAFAVSFIWFRLRYPFFTLRGLVV
GATISIFPSQWMESFSPFRVVGSVCGELPVSSTMLYGAPQLMVATGRTFQLFRGKELTML
RGGPHFEKRVRAVTQAGKYRFVAEGPRIHAFVHHKPLWNCMHNDVTQSRVDHILAVDDIL
FCVGNDKRVVVREIKSGNMLTEFLVDGSEETRAMVTPAGYNNKLLLATAQGSLQLYNFKS
GVCLWREKREPGAQITALAASNFKDIIAYGTSNGRVVVLNMATNEDIMSFDQEERGAVTA
LAFRTDKDVLVAGSSSGEVAMWDLENGCLDGLLTRGKQVKTETEVLESPHTNTVHSIVVL
PTETATIVTAGADNALMQFRFDTVDGLGVLVRERRGHMGSCTEAKFYNSDLLLTAGTDRS
LRVTHLFSDRASWELSQGQLGRRGREKQMGREAMKMPPAVAIASCTARNYQWASIVSIHE
SSSKMCGWRMDTRSLDCKLSGIKTSMHIARAVAMSDCGNFAVIGYSSGDVSVVSIQNKGV
RQLLDSSLKPDDRAHCGSVECVEVACGNNIVVTAGLDSMIKLWSLFTCRLRTVVKTDCPL
HKSCIHQPSSLFIAAQHFSIRVYHCNPDIGLTTQELRVPVRTFSGHTSPITTLALAPDSY
RYVVSASGDAALLVWDLASSACVGQYRLASPAISLAFHPDALFMVSTHAGERGAFLWSNN
LRYGFVPEVITDPRARSVEELPQLHFPTAHGAAEDAEDDTVDNAVKCEKGLPGSGNEVKE
EGESDGNDDGMLGDIAGAGGNAEQEVELFDAKKDTALMQIEREKVKWAELDEIISGGMRL
AGVPRSMWFDLTLLEQIREKNQPLLPPKKRDVPFFLPTTQELRPTFLVAASNSKDKETLV
SRVVSAPIAQLTPVQQMLVRNEHDAFLSYILSLGSPQAVDLEIKRAVDYVEGCSYTEKEL
ERIKDCLHGLLSFVAEWLKRRENVDLVQGILAAVIHSHGPLITKCGAELINVLEELAELQ
NSIRYSVDHLVGYPSCLAGTFSGSHF
NT seq 3321 nt   +upstreamnt  +downstreamnt
atgtggtgtacggtagagggagaggagacctggtttatgcgagaacagtgtgggaagggt
attgaagtgtcattaaatacggctacttgtttggcttctcctcgtaggaagatgcacttg
ttggttgtgcctcgcatccacacgttttctgctcccctctgcatgcgtacttttgatcct
gttgcaccaaatgtagaaaaaaaaaaaggaaggaaggaaggaaggaaggaagaaagccga
aaggatcgtgcgggtgcggttagttgcgtcaaaggaaggaatatttgcctggcgtttgcg
gtctcttttatttggtttcgtctccgttatcccttttttaccttgcgggggctagttgtt
ggggccactatttcgatattcccctctcagtggatggaaagcttctccccatttcgtgtg
gtcggaagcgtatgtggtgagctgccagtcagtagcacaatgttatacggcgcaccgcag
ttgatggttgccacaggacgcacgtttcagttgtttcgggggaaagaacttacaatgctt
cgcggtgggccgcactttgagaagagggtgagggctgtaacacaggcagggaagtatcgt
tttgttgccgaagggcctcggattcatgcatttgtgcatcacaagccgctctggaactgc
atgcacaacgacgttacgcagagcagagtggatcacattcttgctgtggatgatattctt
ttctgtgtgggtaacgataaacgtgtagtggtgcgggagataaagagcgggaacatgctc
acagagtttcttgttgatggtagtgaggagacacgcgcgatggttacccctgccggatac
aacaacaaacttcttttggcgactgcacagggatcactgcagttatacaatttcaaaagc
ggtgtctgcctgtggcgcgaaaagcgagagcctggtgcgcagatcacggctctagcggca
agtaacttcaaggacatcatcgcatatggcacaagcaacggccgtgtagttgttctcaac
atggctactaacgaggatatcatgtcatttgaccaggaggagagaggtgccgtgactgcg
ctggcgttccgaaccgacaaggatgtcctcgtcgccgggtctagctccggcgaggtggcg
atgtgggaccttgaaaatggctgccttgacggtcttctgacgcgtggcaagcaagtgaaa
actgagacggaggtgctggagtccccacacaccaataccgttcactccatagttgttctg
ccaacagaaactgccaccattgttacagctggagctgacaatgcattgatgcagtttagg
tttgacactgtagacggtcttggcgtgctggtgcgtgagcgtcggggtcatatggggagc
tgcacagaggctaagttttataacagcgacttgctgctgactgccggtaccgatcgttcg
ctccgtgtgacgcacctattttcagatcgtgcgtcatgggaattgtctcagggccagttg
ggccgacgggggcgcgagaagcagatgggacgtgaggcgatgaagatgccacctgctgtt
gctattgccagctgcactgcaaggaactaccagtgggcgagcattgtttctattcatgaa
tcttcgtcaaagatgtgcggctggcgcatggacactcgttctctagattgtaagctgagc
ggtattaagacgtcgatgcacatcgcacgtgccgtcgccatgagcgactgcgggaacttt
gctgttatcgggtactcgagcggtgatgtatctgttgtcagtattcagaataaaggcgta
cggcagttgcttgactcctcactgaagccggacgaccgggcacactgtggttcagtggag
tgcgttgaggtggcctgtggaaacaacattgttgtaactgcaggtcttgactcgatgatt
aagttgtggagtctcttcacttgtcgcctccgcaccgtcgtgaagactgattgtcctttg
cataagtcatgtattcatcaaccgtcgtctctctttattgccgcgcagcacttctccatt
cgtgtataccactgcaaccccgacattgggcttacaacccaagagttgcgcgtgcccgta
cgaacgttcagcggccacaccagccccattacaaccctagcccttgcgccagactcgtat
cgttacgtagtgtcggcatctggcgatgcagcactacttgtttgggatcttgcctcctct
gcctgtgtcgggcagtaccgcctagcttctccggccatctcacttgccttccacccagat
gctctatttatggtctctacgcatgccggtgagcgtggtgccttcctttggtcaaataat
ttgcgttatggctttgttccagaggtaataacggatccgagggcgcgcagcgtggaggaa
ctgccacagctgcactttcctacagctcatggcgccgcggaggatgcagaggatgatact
gttgacaatgctgtgaagtgtgagaaagggctcccgggttcaggtaatgaagtcaaggag
gagggtgaaagcgatggtaatgatgatggaatgttgggcgacatagcgggtgctggtgga
aacgctgagcaggaggtagagctttttgacgccaagaaggatactgcgttaatgcaaatt
gagagggaaaaagtaaaatgggctgagcttgatgagattatttccggtggcatgcgccta
gctggcgtgccccgctccatgtggttcgaccttaccctgttggagcagataagggaaaag
aaccaaccgctccttccacccaagaagcgcgacgttcccttctttctaccaaccacgcag
gaattgcgtcccacgttccttgttgcagcttcaaactcaaaagataaggagactcttgta
tcgcgggtggtgagtgccccgatagcccagctcacgccggtgcagcagatgcttgtgcgg
aacgaacatgatgcttttttgtcgtacatcctttcccttggttcaccacaggctgttgac
ttggagatcaagcgtgcggtcgactatgtggagggttgctcttacacggagaaggaactg
gagcgtattaaggactgcctgcatgggctgttgtcatttgtggcggagtggctgaagcgg
cgcgagaatgtcgatttggtacagggcatattggctgccgtcattcattcacacggccca
ctgataacaaagtgtggtgccgagttaattaatgttcttgaggagctggcagagttacag
aactcgatacgatatagcgtagatcacctcgttgggtacccaagctgtctggcaggtact
ttttcggggtcacacttctaa

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