Trypanosoma brucei gambiense: TbgDal_XI1230
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Entry
TbgDal_XI1230 CDS
T06526
Name
(RefSeq) hypothetical protein, conserved
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
tbg
Trypanosoma brucei gambiense
Pathway
tbg04142
Lysosome biogenesis
tbg04145
Phagocytosis
tbg04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
TbgDal_XI1230
04142 Lysosome biogenesis
TbgDal_XI1230
04148 Efferocytosis
TbgDal_XI1230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tbg04131
]
TbgDal_XI1230
Membrane trafficking [BR:
tbg04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
TbgDal_XI1230
Hops complex
TbgDal_XI1230
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS18_solenoid_2nd
Pep3_Vps18
VPS18_solenoid_1st
Clathrin
zf-RING_Vps41
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
23866387
NCBI-ProteinID:
XP_011779271
UniProt:
D0A5Q6
LinkDB
All DBs
Position
11:<319665..>322988
Genome browser
AA seq
1107 aa
AA seq
DB search
MKALSDDSLPSFRLGSQGNLAAVPTKGPSPRFELAPIVNELQQQIISADCQSDVIAMLGA
SGRLVLRDTMQDGPPLVTSVRNPYRVFMSPDGNHTLVSTTDGELCYFSVRNRKSTGHFTL
HNRGASGNEAARNNVASCVCWLSSDAGFIGSPRTSISGAEGVSGSGSGWQLGSGTVYCLV
GTKLGGLVFLVKVEVHGDGGSVKLTCFRSLQLPDANPQQQVGSVEVEHINSLWVLFVSTP
TVLYRVEGLMDSPADFFDSITASTGMWNIRRVSTAGNASASGAVVLYRPGIGMPAQSYAW
ASVAGVVHGLLNSRSDGSSANSGEAALVELTDGGSVVNEQLLDLEHVVVPKSSSNESAAI
TAAVPDHSFRGESQLPVGATLVDVGLTAFHMLLLYRDRFIVLNHPAGLSWRGASSTLQGD
WPYLCEIEERIRFDPFRYSKRESPLRGIVRDTAARKVYVFDANTFWELQVEQEHRQQSEL
FLDRAVNTRESSHLRNRYFRAAYQLCKYDKTMRNKVQFLRGRFLLQIGAIRRAMDVLAEC
DFFEDVYHLLMSFRNSKVLQLYVEKRYKNLVRRVTEGKGVQMQLACLLALIVVLRLDTIA
RSENITDAPSATAVAETLTSGLTAFIEETLEERLPMFSCVGYVNLIAQLLEEQSRPELVL
RFAERMNKMRYVITYHVSRANYVEAANVLGAHARRMDLRSTWYSLAPILMKKCPIQFTKA
MLRAVSRDAYDMPYLLLNAEKLIPVFTQYEPHMNEDPDNQEHQVVLFLDNCITKLGCDSP
AVHNYYLSLVVKHDTKRLDEFLQSSLYYDIGFALRQCLESRRYRQCVRLYSQLHLYEDAL
RAALDCAELTQNETPGGASSAIVGSGVNECAATSLVSGADLGCNEGEERDAWSRLSVAQE
LLLSLPDDMPLPRRKALWLIVAQHVIQKNDNRAALRILADSCGVLKLEDILEEMNDVSVM
ENFKGAICKSLEVYASLTKQLREKQLEAGRMSEELKREIEQPRNSFGYVTANQRCIICRS
TLLQGDAPFFIYPRCCHAVHESCAVAKLESIGGLEAFVVDEGLPKNFLDGINSTRDLAQM
DCVICGETAILEIDMPLFTEDDSWLVL
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgcttagtgacgattctctaccttctttccgattgggatcacaggggaactta
gccgcggttcccacgaagggaccatcaccgcggtttgaacttgcacctattgtgaatgaa
cttcagcagcagatcatatcagcggactgtcaaagtgatgtcattgccatgcttggcgca
tccggacgactggtgttacgtgacacaatgcaagatggtccaccactagtgacctctgtg
cgtaacccttaccgcgtgtttatgagcccagatggcaaccacactcttgtctccaccacc
gatggggagttgtgttacttttctgtacggaatcgtaaatcaacagggcatttcactctc
cacaatcgtggtgccagtgggaatgaggctgcgcgaaataatgtggcttcgtgtgtttgt
tggctttcatctgatgctgggtttattggaagtccacgcacttctatcagtggggcagaa
ggagtaagcggcagtggcagtggttggcagttgggatcaggaaccgtttactgccttgtg
ggcacaaagttgggtggtcttgtgtttttagtgaaagtggaggtacatggagacgggggc
agtgtgaagttaacgtgcttccgttcgctgcaacttcccgacgccaacccccaacaacaa
gttgggtctgttgaggtcgaacatataaactccttatgggttttgttcgtgtcaactcct
acagttctctatcgagtggaggggctcatggattctccagcagatttctttgatagtatc
actgcctcaacaggtatgtggaatattcgtagggtgtctactgcggggaatgcttcagcg
tcgggtgctgtcgtgttgtaccgtccaggtattgggatgccggcacaatcgtatgcatgg
gcaagtgtagctggtgtggtacatggtttgctaaatagccgttcagatggaagttctgct
aatagtggtgaagcagctcttgttgaattaaccgacggaggttctgttgtgaatgaacag
cttcttgacttggagcacgtagtggtacccaaaagtagttccaacgaaagtgccgcgatt
acggcggcggtgcctgatcactccttcagaggcgagtcacaattgccggttggtgcaacg
ttggtggacgttggactaactgctttccatatgttgttactgtatagggataggttcatt
gtgctcaaccacccagccggtctttcgtggcggggagcctcctccacactgcagggggat
tggccatacctttgtgaaattgaggagcgtattcgtttcgatccatttcgttattcaaag
cgggagtcacccctacgcggaatcgttcgagacactgcagcacggaaggtgtacgtcttt
gatgcgaacactttctgggagcttcaggtagaacaggagcaccgacagcagtcggaactc
ttccttgaccgagcagtcaacacaagggagagctctcatctgcgaaaccgctacttcagg
gccgcgtatcaactatgcaaatacgataagacaatgagaaataaggttcaatttcttcgt
ggaaggtttctccttcaaataggtgctattcgtcgggcgatggatgttcttgcggaatgt
gacttcttcgaggacgtttaccacctccttatgtcctttcggaacagtaaggtgttgcaa
ctgtacgtagagaaacggtacaagaacttggtcaggcgtgtcactgaggggaaaggtgtg
caaatgcagttggcgtgtttgttggcgctcattgtagtgttgcggttggacaccattgca
cgtagtgaaaacataaccgatgcaccttccgcaactgcggtagcagagactttaacatcg
gggttgacagctttcattgaagagacgttggaagagcgattgcccatgtttagttgtgtt
ggttacgttaatctcatcgcacagctgttggaagagcagtctcgaccagaattagtactg
aggttcgctgaaaggatgaacaagatgcgctacgttatcacttaccatgtatcgcgcgcc
aactatgtagaggcagcaaatgtgcttggggctcatgcgcggcggatggatttgcggagt
acctggtacagtcttgcccccatcctcatgaagaagtgtcctatacagtttaccaaagcg
atgctgcgtgcggttagccgagatgcctatgacatgccctatttgcttttgaatgctgaa
aaactcatcccagttttcacccaatatgaaccgcacatgaacgaggatcctgacaatcag
gagcatcaagttgttttatttctcgacaattgcatcacgaaattgggttgtgattctcct
gccgtccacaattactacctaagccttgtggtcaaacacgacacgaagcgcctagatgaa
tttctccagtcttcgctttactatgatataggatttgcgctgcggcagtgcctcgagtcg
cgcagatatcggcagtgcgtgagattgtacagccaacttcacctttatgaggatgcattg
cgagcagcattggattgtgcggagttgacacagaacgagacgccaggtggcgccagcagt
gccatcgtcggtagtggtgtgaacgaatgtgctgcaacatctctcgtaagcggagcggat
ttgggatgtaatgaaggtgaggaaagggatgcatggtcgaggttgagcgtagcgcaggaa
ttacttctatcgcttccggatgatatgccgttacctcggcggaaggccttatggctcatt
gtggctcaacatgttattcagaagaatgacaaccgtgcagcactccgtattttagctgac
tcctgtggagttttgaaactggaggatattctcgaggaaatgaacgacgttagcgtcatg
gaaaacttcaaaggggctatatgcaagagtcttgaggtttatgcatcgttgactaagcag
cttcgggagaagcagttggaggcgggtcgcatgtccgaggaactgaaacgggagattgaa
cagcctcgcaacagctttggttacgtaacagcgaatcagcgatgtataatttgccgctca
actttgcttcagggggatgccccgttcttcatttacccccgctgttgccatgcagtacac
gagtcttgcgcggtggcaaaattagagagcattggggggttggaggcttttgttgtggac
gaaggacttccaaaaaacttcttggacggcattaactcgacacgtgatttggcccagatg
gattgcgtgatttgcggcgaaactgcaatattggagattgacatgccattatttacagag
gacgattcttggttagtgttgtag
DBGET
integrated database retrieval system