KEGG   Trypanosoma brucei gambiense: TbgDal_XI12350
Entry
TbgDal_XI12350    CDS       T06526                                 
Name
(RefSeq) hypothetical protein, conserved
  KO
K20178  vacuolar protein sorting-associated protein 8
Organism
tbg  Trypanosoma brucei gambiense
Pathway
tbg04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:tbg00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    TbgDal_XI12350
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tbg04131]
    TbgDal_XI12350
Membrane trafficking [BR:tbg04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    TbgDal_XI12350
SSDB
Motif
Pfam: Beta-prop_VPS8 zf-RING_11 zf_RING_Vps8 zf-RING_UBOX zf-RING_2 zf_RING_Vps8_fungal zf-RING_Vps41 zf-C3HC4 Thia_YuaJ zf-C3HC4_2 zf-RING_5 PHD_NSD
Other DBs
NCBI-GeneID: 23866393
NCBI-ProteinID: XP_011780380
UniProt: D0A8W5
LinkDB
Position
11:2921941..2927058
AA seq 1705 aa
METDDDLFAELLAAEMERTNVLAVENCGFVVQSGAMNSAPDPADTNRIGGTGQLVPQRLG
VDLSSPPHGALSRVTRSGGQDSNVGTRQWEAKDTNELLSSYTTKGSGCHKEACAWRRATY
LSDTGGNEDELLIETLLQLANEKISSSAERESGVQPPSVFMGVTSAASTKGSGQVVPASS
ADPLDGAVFWAALPSGPPATTAGVASTSAQSIGMGAGPRSASSIAPQNGHCQENDAQVLT
AVLDALADGQSSVSGDFLSEEDCNMDELLERAEHVAASAIRVEGKKGVRLVRIHEHVGMR
EELHGNREIVGWPSCVCARPSPFDKNAQECTKTVSPPAPRRVTLCVGTTLGFVLLFDERR
RPIGKFGPPNSILTTLSKPLGAVVSISLSHEASTMAVGYQHGTVKMVEASSLSTLREVTD
EFTTPIIRLRHCQEEAFRILALGSCGSIKLLSFSRVLGMMSHRVVKVASPGGSAPFSDVD
LVFMKEDRVHVVAAASFEVLVVLAVDCGAQGVVTPLYKRKQQTKGTRHHLQLQFVPVPLE
HELLLCLVQNTDVEVFRVANGGVVTDVQKITGARLERSLRAMTHMDSCCLFLDEDNFLHL
FDVSAGVVVESQQMHELEPAYFSTDGRTNRCNAALTCSGRNALILGRTTAFSCTLMSWWE
RLDDLVSKNRFLEALDQLKDFALNVALAVSGLESDPVARRTSIHAYLSILANKFLAYILK
TANSTSFIVGSITCLIKACADVDAMHVFFDSSMVYLRDAKGSDALALYALGHCINSGVVT
FLPEAYVEPLFTLLADDESDIALEVLHTLTTQGEGEPLHGVSRAERVLMKLEGGHECLLP
LSEKYNLVRLKVFILCRWHHGYADALQYALREWRRVNKVNGRDNEVAVDLFECTMRGATV
MDGVYIPEQCWREAKGQMWRHLLNTPGEFEALLRVNAERVVMVTLPILQESGPYSPWSNP
EERDDCAAQLLLHLAGVDFASGKPFRPWELVQRDWPPYSVVQQLFAGIIHLVLGGAVVLT
PVQLFFDHACTHLIYQFQMARDNVQRRSAQTDVIALLTSPHMEGLNFAFVEAALHQQRMG
RALAELHYIRGELAEAIECYLCKEYNRFDATLAKDVFNFIWRVSRIEGEGKRERSRRLRD
AVMHHIAALADADPTALARFVFEHLRDDHEEVMSIIRKSSKTFLRYIDELVAKAEPKVLG
DVMLQNAYIGLLCSEDPERVYPYMRAYEAALAYDCDTVLCSMKKYKVIDAAVYLLEKRFR
VEEAVEVLMDAITSKLHEVQLELIREVQSPEMRNGSFVSGSAQRKHSSPQRQTIRAAQSG
SCEEALQHVVRHAVDLCARHYAAEEARSYKVWMTLFGHFASPQKSLGDCLEREGALQESG
SISKALDERNGGPAEFGGSTKKSGTPLSLTPEERSIVVKRLLPLFTDYASYILMCMIKVL
NLADVITFIVGSCKREGLKTLESIISRTVGSLRFECEVNEICNDSLQQDAINLSREHYRR
LNMGVMPVANMCYVCGGDLNFARGVGAETAVRIYACGHAYHEKCIVGVASEHLGNTCIQC
SRSRSGVVNSSALNMGVVQLGEGIPGNVGPNQRGCHLEEEEQEGGEAAEVDNPQVILRRL
RQTRAKMSWSRECRNRIQSFLRKKCGEQETLSMAPTVERPLVVLPGVIGTTSAAASEEGP
EALPEVDNALPMTLTDEEVLELFDT
NT seq 5118 nt   +upstreamnt  +downstreamnt
atggagacagatgacgacttgttcgctgaactgctcgccgccgaaatggaaaggacgaac
gtactcgcagttgagaactgtgggtttgtcgtccaaagcggggcaatgaattctgctccc
gatccggcagacacgaataggattggaggaactggtcaactggtgccccaacggttggga
gtggacttatcgtctccccctcacggtgcgttgtcgcgggttacgagatctggtgggcag
gacagtaatgtcggcacgaggcagtgggaagcaaaggatacaaacgaactgttgtcctcg
tacaccacgaagggaagcggttgccacaaagaggcgtgcgcgtggagaagggcgacgtac
ctttcagacacaggaggaaacgaagacgagttgctcatagaaaccctactacagcttgcg
aatgaaaagatctcatcatctgctgaacgggaaagtggggtgcaaccgccttcggtcttt
atgggtgtcacctctgcggcaagtacgaagggcagcggccaagtggtcccggcgtcctct
gcagacccgctggatggcgcagtgttttgggctgcgcttccaagcgggccgcccgcaact
actgccggagttgcatcaacctctgcgcaatcaatcggaatgggtgcaggaccaaggagc
gcctcgtctatcgcacctcaaaatggacattgtcaagaaaacgacgcacaagtgcttacc
gctgtattggatgccctcgccgatggccagtccagcgttagcggtgactttctaagtgaa
gaggactgcaacatggatgaattgctggagcgcgcagagcacgtcgctgcctcggcaatc
cgtgtagaagggaaaaagggagtccgcctggtgcgtatccacgagcacgtgggtatgcgg
gaggagcttcatggaaacagagaaatcgtgggatggccttcctgcgtgtgcgctcgcccc
tctcctttcgacaaaaacgcccaggagtgcaccaaaaccgtctcgccacctgcaccgaga
agagtgacactgtgtgttggaactacgctaggctttgttttgcttttcgacgaaaggcgc
cgacccatcggtaaattcggtccgccaaactccatacttaccactctatcaaaaccacta
ggggctgtcgtctcaatttcgttgtctcacgaggcgtcgacgatggcagtgggctatcag
catggcaccgttaagatggtagaagcgagctcgctatctacgcttcgtgaagttaccgat
gaattcaccactccaatcatccgattacgtcattgccaggaggaggcctttcggattctt
gcgttgggaagttgtggcagtatcaaactgctctccttctcgcgcgttttgggcatgatg
agtcaccgtgtggtgaaagttgcttctcccggaggaagcgcacctttcagcgatgtggac
cttgtatttatgaaggaggacagagttcacgtcgtggctgcagcttcatttgaagtatta
gttgtccttgcagtggactgcggagcacaaggtgtcgttacgccactatataaacgaaag
caacaaacaaaaggcactaggcaccatttacaacttcagtttgtaccagtgccactggag
cacgagcttcttctttgcctcgtgcagaacacggatgtggaagtgtttagggtggcgaat
ggtggcgttgtgacagacgtgcagaaaatcacaggcgcgcgtcttgaaaggtcactgcgc
gcaatgactcacatggatagttgttgtcttttccttgatgaagacaacttcctacacctt
tttgacgtcagcgcaggtgttgttgtggagtcccagcaaatgcacgaattggaaccagcg
tatttttccaccgatggccgtacgaatcgctgcaatgcagcactcacgtgtagcggaaga
aatgccctcattttggggcggaccaccgccttcagctgcacgttgatgtcatggtgggag
cgcctagacgacttagttagcaaaaataggttcctcgaagcactggatcagctaaaggac
ttcgctctcaatgtcgcccttgccgtctcgggtctggaaagtgacccagtggcgcgtcgc
actagcattcatgcctacctttccatacttgctaataagttcctcgcgtacatcttgaag
acagcgaattccacgtcttttattgttgggagtatcacttgccttattaaagcctgtgca
gatgttgatgcaatgcatgtgttttttgactcctcaatggtgtacctgcgtgatgccaaa
ggcagcgatgcgctcgcactctacgctcttgggcactgcatcaattcgggggtggtgacc
ttcctgccggaagcctacgtagagcctctttttactcttctcgcggacgatgaatcggat
attgcgttggaggtattgcacacactaaccacacagggggagggggaaccccttcatgga
gtgtcgcgagcggaacgggtgctgatgaagctggaggggggtcacgagtgtcttttgccc
ctctccgagaagtacaacttggttcgtctaaaggttttcattctctgtcgctggcaccat
ggatatgcagatgcgctccagtacgccctgagggagtggcgccgcgtgaacaaagttaat
ggaagggacaatgaggtagcagttgacctttttgagtgcactatgagaggggccaccgtc
atggatggcgtttatattcccgagcagtgctggcgtgaggcaaaggggcaaatgtggagg
cacctgcttaacacaccaggtgagttcgaagcgcttcttcgcgtaaatgctgagcgtgtt
gtgatggttacgctgcccattttgcaggaaagtggaccatattcgccatggagtaatcca
gaggagcgagacgactgcgccgcccagcttcttttacacctcgctggggtggactttgca
tctgggaaaccgtttaggccatgggaactggtgcagcgcgactggccgccgtactcggtt
gtgcaacaacttttcgcagggatcatacacctcgttttgggtggtgcagtggtgctgact
ccagtgcagttattctttgatcacgcctgtacgcatctaatatatcagttccaaatggcc
agggacaatgtgcagaggcgcagtgcgcagacggacgtgatagcacttcttaccagccca
cacatggaaggacttaacttcgcatttgtcgaggcagcgctacatcagcaacgaatgggc
cgtgccttggcagaacttcattacattcgtggggagttggccgaggccatcgagtgctac
ctttgtaaagaatacaaccgttttgacgctacacttgccaaagacgtgttcaactttatc
tggagggtaagccgcatagaaggtgaaggaaagagggaacggagcaggcggctccgcgat
gccgtgatgcatcacattgctgcactagctgacgcagaccccacagcactagcgcggttt
gtgtttgagcaccttcgtgatgaccacgaggaggtgatgagcattatccgcaagtctagt
aagacatttctccgctatattgacgagttggttgcgaaagcagagccaaaagttctgggg
gatgtaatgctgcaaaacgcgtatattggcctgctttgctctgaagatccggagcgggtg
tatccgtacatgcgggcatacgaggccgcgttggcttacgactgcgacactgtcttatgc
tccatgaagaagtacaaggtgattgacgccgccgtttacttgctcgaaaagaggttccgc
gttgaggaagccgttgaagtgttgatggacgccattacaagtaaacttcatgaggtgcag
ttggagcttatacgcgaggtccagtctccagagatgagaaacggaagttttgtatcaggt
tccgcacaacgcaagcattcgtctccacagcgccaaaccataagagcagctcaatcgggg
tcctgtgaggaggctcttcaacacgtggtgaggcacgcagttgatctatgcgctaggcat
tacgccgcggaggaagctcggtcgtataaggtgtggatgacattgtttggtcatttcgca
agtccgcaaaaaagtctaggcgactgtctagaacgggagggagcgctgcaagaatcaggt
tccatctccaaagctcttgacgaaagaaacggaggccccgcggagttcgggggctcaacg
aagaagtctggtacaccgttaagccttacgcccgaagagcgttccattgtggttaagaga
ttgcttcccttattcaccgattacgcgtcatacatcttgatgtgtatgatcaaggtgctc
aaccttgccgacgttattacattcatcgtgggaagttgcaagagggagggtttaaaaact
cttgagtcgataatttcccgtacggtgggttcgctgcgatttgagtgcgaagttaacgaa
atttgcaatgattcccttcagcaggatgctataaatttaagcagggaacattaccgccgc
ttaaatatgggtgtgatgcccgtggccaacatgtgttatgtgtgcggtggggaccttaac
tttgctcgtggcgtgggggccgaaacagccgtgaggatatacgcatgcggtcacgcgtat
catgagaaatgtattgtgggtgttgctagtgaacacctaggcaatacgtgtatccagtgc
agcaggtcgcgatcaggtgttgttaattcatcagcgctgaatatgggagtagtccaactg
ggcgagggcatccctggaaatgttggacccaaccaacgcggctgtcacttagaggaggaa
gaacaagagggtggggaagccgcggaagttgacaacccacaggtgattttgcggaggtta
aggcaaacacgagcgaagatgagctggtctcgggaatgcagaaacaggatacaaagtttc
ctccgcaagaaatgtggtgaacaggaaactctttccatggctccaacggtggagagacct
cttgtagtgttaccgggcgtcattggcacaacctcagcggccgcatcggaagaagggcca
gaagccttgccagaagtggacaacgcgcttccaatgacactgactgatgaggaggttctc
gagttattcgacacctga

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