Trypanosoma brucei gambiense: TbgDal_XI12350
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Entry
TbgDal_XI12350 CDS
T06526
Name
(RefSeq) hypothetical protein, conserved
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
tbg
Trypanosoma brucei gambiense
Pathway
tbg04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
TbgDal_XI12350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tbg04131
]
TbgDal_XI12350
Membrane trafficking [BR:
tbg04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
TbgDal_XI12350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
zf-RING_11
zf_RING_Vps8
zf-RING_UBOX
zf-RING_2
zf_RING_Vps8_fungal
zf-RING_Vps41
zf-C3HC4
Thia_YuaJ
zf-C3HC4_2
zf-RING_5
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
23866393
NCBI-ProteinID:
XP_011780380
UniProt:
D0A8W5
LinkDB
All DBs
Position
11:2921941..2927058
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AA seq
1705 aa
AA seq
DB search
METDDDLFAELLAAEMERTNVLAVENCGFVVQSGAMNSAPDPADTNRIGGTGQLVPQRLG
VDLSSPPHGALSRVTRSGGQDSNVGTRQWEAKDTNELLSSYTTKGSGCHKEACAWRRATY
LSDTGGNEDELLIETLLQLANEKISSSAERESGVQPPSVFMGVTSAASTKGSGQVVPASS
ADPLDGAVFWAALPSGPPATTAGVASTSAQSIGMGAGPRSASSIAPQNGHCQENDAQVLT
AVLDALADGQSSVSGDFLSEEDCNMDELLERAEHVAASAIRVEGKKGVRLVRIHEHVGMR
EELHGNREIVGWPSCVCARPSPFDKNAQECTKTVSPPAPRRVTLCVGTTLGFVLLFDERR
RPIGKFGPPNSILTTLSKPLGAVVSISLSHEASTMAVGYQHGTVKMVEASSLSTLREVTD
EFTTPIIRLRHCQEEAFRILALGSCGSIKLLSFSRVLGMMSHRVVKVASPGGSAPFSDVD
LVFMKEDRVHVVAAASFEVLVVLAVDCGAQGVVTPLYKRKQQTKGTRHHLQLQFVPVPLE
HELLLCLVQNTDVEVFRVANGGVVTDVQKITGARLERSLRAMTHMDSCCLFLDEDNFLHL
FDVSAGVVVESQQMHELEPAYFSTDGRTNRCNAALTCSGRNALILGRTTAFSCTLMSWWE
RLDDLVSKNRFLEALDQLKDFALNVALAVSGLESDPVARRTSIHAYLSILANKFLAYILK
TANSTSFIVGSITCLIKACADVDAMHVFFDSSMVYLRDAKGSDALALYALGHCINSGVVT
FLPEAYVEPLFTLLADDESDIALEVLHTLTTQGEGEPLHGVSRAERVLMKLEGGHECLLP
LSEKYNLVRLKVFILCRWHHGYADALQYALREWRRVNKVNGRDNEVAVDLFECTMRGATV
MDGVYIPEQCWREAKGQMWRHLLNTPGEFEALLRVNAERVVMVTLPILQESGPYSPWSNP
EERDDCAAQLLLHLAGVDFASGKPFRPWELVQRDWPPYSVVQQLFAGIIHLVLGGAVVLT
PVQLFFDHACTHLIYQFQMARDNVQRRSAQTDVIALLTSPHMEGLNFAFVEAALHQQRMG
RALAELHYIRGELAEAIECYLCKEYNRFDATLAKDVFNFIWRVSRIEGEGKRERSRRLRD
AVMHHIAALADADPTALARFVFEHLRDDHEEVMSIIRKSSKTFLRYIDELVAKAEPKVLG
DVMLQNAYIGLLCSEDPERVYPYMRAYEAALAYDCDTVLCSMKKYKVIDAAVYLLEKRFR
VEEAVEVLMDAITSKLHEVQLELIREVQSPEMRNGSFVSGSAQRKHSSPQRQTIRAAQSG
SCEEALQHVVRHAVDLCARHYAAEEARSYKVWMTLFGHFASPQKSLGDCLEREGALQESG
SISKALDERNGGPAEFGGSTKKSGTPLSLTPEERSIVVKRLLPLFTDYASYILMCMIKVL
NLADVITFIVGSCKREGLKTLESIISRTVGSLRFECEVNEICNDSLQQDAINLSREHYRR
LNMGVMPVANMCYVCGGDLNFARGVGAETAVRIYACGHAYHEKCIVGVASEHLGNTCIQC
SRSRSGVVNSSALNMGVVQLGEGIPGNVGPNQRGCHLEEEEQEGGEAAEVDNPQVILRRL
RQTRAKMSWSRECRNRIQSFLRKKCGEQETLSMAPTVERPLVVLPGVIGTTSAAASEEGP
EALPEVDNALPMTLTDEEVLELFDT
NT seq
5118 nt
NT seq
+upstream
nt +downstream
nt
atggagacagatgacgacttgttcgctgaactgctcgccgccgaaatggaaaggacgaac
gtactcgcagttgagaactgtgggtttgtcgtccaaagcggggcaatgaattctgctccc
gatccggcagacacgaataggattggaggaactggtcaactggtgccccaacggttggga
gtggacttatcgtctccccctcacggtgcgttgtcgcgggttacgagatctggtgggcag
gacagtaatgtcggcacgaggcagtgggaagcaaaggatacaaacgaactgttgtcctcg
tacaccacgaagggaagcggttgccacaaagaggcgtgcgcgtggagaagggcgacgtac
ctttcagacacaggaggaaacgaagacgagttgctcatagaaaccctactacagcttgcg
aatgaaaagatctcatcatctgctgaacgggaaagtggggtgcaaccgccttcggtcttt
atgggtgtcacctctgcggcaagtacgaagggcagcggccaagtggtcccggcgtcctct
gcagacccgctggatggcgcagtgttttgggctgcgcttccaagcgggccgcccgcaact
actgccggagttgcatcaacctctgcgcaatcaatcggaatgggtgcaggaccaaggagc
gcctcgtctatcgcacctcaaaatggacattgtcaagaaaacgacgcacaagtgcttacc
gctgtattggatgccctcgccgatggccagtccagcgttagcggtgactttctaagtgaa
gaggactgcaacatggatgaattgctggagcgcgcagagcacgtcgctgcctcggcaatc
cgtgtagaagggaaaaagggagtccgcctggtgcgtatccacgagcacgtgggtatgcgg
gaggagcttcatggaaacagagaaatcgtgggatggccttcctgcgtgtgcgctcgcccc
tctcctttcgacaaaaacgcccaggagtgcaccaaaaccgtctcgccacctgcaccgaga
agagtgacactgtgtgttggaactacgctaggctttgttttgcttttcgacgaaaggcgc
cgacccatcggtaaattcggtccgccaaactccatacttaccactctatcaaaaccacta
ggggctgtcgtctcaatttcgttgtctcacgaggcgtcgacgatggcagtgggctatcag
catggcaccgttaagatggtagaagcgagctcgctatctacgcttcgtgaagttaccgat
gaattcaccactccaatcatccgattacgtcattgccaggaggaggcctttcggattctt
gcgttgggaagttgtggcagtatcaaactgctctccttctcgcgcgttttgggcatgatg
agtcaccgtgtggtgaaagttgcttctcccggaggaagcgcacctttcagcgatgtggac
cttgtatttatgaaggaggacagagttcacgtcgtggctgcagcttcatttgaagtatta
gttgtccttgcagtggactgcggagcacaaggtgtcgttacgccactatataaacgaaag
caacaaacaaaaggcactaggcaccatttacaacttcagtttgtaccagtgccactggag
cacgagcttcttctttgcctcgtgcagaacacggatgtggaagtgtttagggtggcgaat
ggtggcgttgtgacagacgtgcagaaaatcacaggcgcgcgtcttgaaaggtcactgcgc
gcaatgactcacatggatagttgttgtcttttccttgatgaagacaacttcctacacctt
tttgacgtcagcgcaggtgttgttgtggagtcccagcaaatgcacgaattggaaccagcg
tatttttccaccgatggccgtacgaatcgctgcaatgcagcactcacgtgtagcggaaga
aatgccctcattttggggcggaccaccgccttcagctgcacgttgatgtcatggtgggag
cgcctagacgacttagttagcaaaaataggttcctcgaagcactggatcagctaaaggac
ttcgctctcaatgtcgcccttgccgtctcgggtctggaaagtgacccagtggcgcgtcgc
actagcattcatgcctacctttccatacttgctaataagttcctcgcgtacatcttgaag
acagcgaattccacgtcttttattgttgggagtatcacttgccttattaaagcctgtgca
gatgttgatgcaatgcatgtgttttttgactcctcaatggtgtacctgcgtgatgccaaa
ggcagcgatgcgctcgcactctacgctcttgggcactgcatcaattcgggggtggtgacc
ttcctgccggaagcctacgtagagcctctttttactcttctcgcggacgatgaatcggat
attgcgttggaggtattgcacacactaaccacacagggggagggggaaccccttcatgga
gtgtcgcgagcggaacgggtgctgatgaagctggaggggggtcacgagtgtcttttgccc
ctctccgagaagtacaacttggttcgtctaaaggttttcattctctgtcgctggcaccat
ggatatgcagatgcgctccagtacgccctgagggagtggcgccgcgtgaacaaagttaat
ggaagggacaatgaggtagcagttgacctttttgagtgcactatgagaggggccaccgtc
atggatggcgtttatattcccgagcagtgctggcgtgaggcaaaggggcaaatgtggagg
cacctgcttaacacaccaggtgagttcgaagcgcttcttcgcgtaaatgctgagcgtgtt
gtgatggttacgctgcccattttgcaggaaagtggaccatattcgccatggagtaatcca
gaggagcgagacgactgcgccgcccagcttcttttacacctcgctggggtggactttgca
tctgggaaaccgtttaggccatgggaactggtgcagcgcgactggccgccgtactcggtt
gtgcaacaacttttcgcagggatcatacacctcgttttgggtggtgcagtggtgctgact
ccagtgcagttattctttgatcacgcctgtacgcatctaatatatcagttccaaatggcc
agggacaatgtgcagaggcgcagtgcgcagacggacgtgatagcacttcttaccagccca
cacatggaaggacttaacttcgcatttgtcgaggcagcgctacatcagcaacgaatgggc
cgtgccttggcagaacttcattacattcgtggggagttggccgaggccatcgagtgctac
ctttgtaaagaatacaaccgttttgacgctacacttgccaaagacgtgttcaactttatc
tggagggtaagccgcatagaaggtgaaggaaagagggaacggagcaggcggctccgcgat
gccgtgatgcatcacattgctgcactagctgacgcagaccccacagcactagcgcggttt
gtgtttgagcaccttcgtgatgaccacgaggaggtgatgagcattatccgcaagtctagt
aagacatttctccgctatattgacgagttggttgcgaaagcagagccaaaagttctgggg
gatgtaatgctgcaaaacgcgtatattggcctgctttgctctgaagatccggagcgggtg
tatccgtacatgcgggcatacgaggccgcgttggcttacgactgcgacactgtcttatgc
tccatgaagaagtacaaggtgattgacgccgccgtttacttgctcgaaaagaggttccgc
gttgaggaagccgttgaagtgttgatggacgccattacaagtaaacttcatgaggtgcag
ttggagcttatacgcgaggtccagtctccagagatgagaaacggaagttttgtatcaggt
tccgcacaacgcaagcattcgtctccacagcgccaaaccataagagcagctcaatcgggg
tcctgtgaggaggctcttcaacacgtggtgaggcacgcagttgatctatgcgctaggcat
tacgccgcggaggaagctcggtcgtataaggtgtggatgacattgtttggtcatttcgca
agtccgcaaaaaagtctaggcgactgtctagaacgggagggagcgctgcaagaatcaggt
tccatctccaaagctcttgacgaaagaaacggaggccccgcggagttcgggggctcaacg
aagaagtctggtacaccgttaagccttacgcccgaagagcgttccattgtggttaagaga
ttgcttcccttattcaccgattacgcgtcatacatcttgatgtgtatgatcaaggtgctc
aaccttgccgacgttattacattcatcgtgggaagttgcaagagggagggtttaaaaact
cttgagtcgataatttcccgtacggtgggttcgctgcgatttgagtgcgaagttaacgaa
atttgcaatgattcccttcagcaggatgctataaatttaagcagggaacattaccgccgc
ttaaatatgggtgtgatgcccgtggccaacatgtgttatgtgtgcggtggggaccttaac
tttgctcgtggcgtgggggccgaaacagccgtgaggatatacgcatgcggtcacgcgtat
catgagaaatgtattgtgggtgttgctagtgaacacctaggcaatacgtgtatccagtgc
agcaggtcgcgatcaggtgttgttaattcatcagcgctgaatatgggagtagtccaactg
ggcgagggcatccctggaaatgttggacccaaccaacgcggctgtcacttagaggaggaa
gaacaagagggtggggaagccgcggaagttgacaacccacaggtgattttgcggaggtta
aggcaaacacgagcgaagatgagctggtctcgggaatgcagaaacaggatacaaagtttc
ctccgcaagaaatgtggtgaacaggaaactctttccatggctccaacggtggagagacct
cttgtagtgttaccgggcgtcattggcacaacctcagcggccgcatcggaagaagggcca
gaagccttgccagaagtggacaacgcgcttccaatgacactgactgatgaggaggttctc
gagttattcgacacctga
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