Trypanosoma brucei gambiense: TbgDal_XI13260
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Entry
TbgDal_XI13260 CDS
T06526
Name
(RefSeq) DNA repair and recombination helicase protein PIF1, putative
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
tbg
Trypanosoma brucei gambiense
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tbg03032
]
TbgDal_XI13260
03029 Mitochondrial biogenesis [BR:
tbg03029
]
TbgDal_XI13260
Enzymes [BR:
tbg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
TbgDal_XI13260
DNA replication proteins [BR:
tbg03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
TbgDal_XI13260
Mitochondrial biogenesis [BR:
tbg03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
TbgDal_XI13260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_30
AAA_19
Viral_helicase1
DEAD
AAA_22
AAA_16
Pif1_2B_dom
NTPase_1
AAA
YqeC
NACHT
NB-ARC
HerA_C
UvrD_C_2
T2SSE
Bac_DnaA
Sigma54_activat
SLFN-g3_helicase
MobB
MeaB
DUF815
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
23866494
NCBI-ProteinID:
XP_011780471
UniProt:
D0A956
LinkDB
All DBs
Position
11:3137560..3139923
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AA seq
787 aa
AA seq
DB search
MVAYTLDTLFASDIDSATLFYSEGCGPIRLVALSAQMRRLVRLGPIRVAKACVEVRPMAP
TKEFFEEGRQLQHIEVAGVGDFADSERSGDTFVNPFTGRLTPAWGRVAKELFSLGFEHSI
VNPFRLVWNPTKAALVSDAALQPFRTSTVTWRRNLAALLSRRDAADAVGEEIHRLYNEIT
SAYLPPKLDTMHDPRLSTMTMTPDQQNVIRCALRGYSMFIGGSAGTGKTVLLKAIHRKLT
EMGLRVAMTATTGVASVQLGGCTFHLAFGVPIKGEEGTRKRWDSNAFRAVDVVIIDEVSL
LDAELFETFEEEARMARLQQSPFGGLQVIACGDFLQLAMMDVSIGGPCYQSHAFRHLIPV
CLVTSMRQAQGDPFCELLGQLRVGKFDKKAFKALDRPVSGDANNVTYIFPRRCDAQRLND
EKLCELRSEEMIFAPQRGPLQLVGNFTPAGLVDWGRKKDFPKREKIITVLTEEIKRITGV
DIVDHNIVVMPAGGEKNAVLIRLRHSEDRNVLICKNGGSKEHGASNEGGAEESHWRAILE
ATAGRLKGKLHQIYNQDPHNFIPPSVSLMLADASLHPNAELISPLRLKLGCRVMINRNLS
RTVSNGSVGIVEAFAAPNLDLFPRRHETLPKAFHTWSLERNGFQRLPIVRLLSGEVVQLP
PLSVMIGGTPSTYFYGHELFVLPLQLGYGFTVHKVQGLTLEGTVVLDCKKFFECPHLVYV
ACSRVRSMDQLIVRNVRSDMIIVRQSALDFTNALRDASVMSSLDPPDGCTRASWVRRLSP
LLVGLTD
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggttgcttacacacttgatacgctgtttgcgtcagacatagacagtgcgactttgttt
tattcagaaggttgtggccccattcgccttgtggccctgtcagcacagatgcggcgctta
gtgcgtctcgggcctattcgtgtcgcgaaggcgtgcgttgaagtgcggccaatggcaccc
acaaaagaattttttgaggaaggccgtcagttgcagcacattgaggttgctggcgttggt
gatttcgccgatagtgaacgcagcggtgacacctttgtcaatccattcacaggacgcctt
acgccagcgtgggggcgtgtggcgaaggaacttttctcccttgggtttgaacacagcatt
gtgaacccctttcggcttgtttggaatcccacgaaagctgcactggtaagcgacgctgca
ctgcaaccgttccggacttcaacggtaacgtggcgaagaaacctcgcagcactactgtcc
cggagagatgctgcggatgcggtgggggaagagatccatcgtctgtacaatgaaatcaca
agcgcgtatttaccacccaaattggataccatgcacgaccctcgtctgtcgacgatgaca
atgacacccgatcagcaaaatgttattaggtgtgctctccgcgggtacagcatgttcatt
ggtggaagtgccggaacaggtaaaacggtgctgctaaaggcaattcacagaaaacttact
gagatgggattgcgagtggccatgacagcaacgacgggcgtcgcgtccgtacagttaggt
ggctgcacgtttcatctggcatttggtgtacccatcaagggggaagagggaacaaggaaa
cgatgggactccaatgcatttcgtgcagtggatgtggtgattattgatgaggtttcgtta
ctggacgcagaactgtttgaaacctttgaggaagaggcccgaatggctcgattgcaacag
tcgccgtttggtgggcttcaggtgatcgcgtgtggagattttctgcagcttgcaatgatg
gacgtaagcattggtggcccgtgctatcaaagtcatgcctttcgacatcttattcccgtc
tgtttggttacttcaatgcgccaagcgcagggcgatccattctgcgagttgctagggcag
ctgcgtgtgggcaagtttgacaagaaagccttcaaagcattggatcgtcccgtaagtggg
gacgcaaacaatgttacgtacatattcccaaggcgctgtgatgcacagaggttgaacgat
gagaaactgtgcgagttgcgaagcgaagaaatgatatttgctccacagcggggtcccctt
cagctggttgggaatttcactccagccggtctggtagactggggacggaaaaaggacttt
cccaagcgtgaaaagatcattacagtacttactgaggaaatcaaaagaattaccggagtg
gacattgtggaccataatattgtagtgatgcccgctggtggggagaagaacgcggttctc
attcgtctccgccactcagaagatagaaatgtgctgatatgcaagaatggcgggtccaaa
gaacacggtgctagcaatgaagggggcgctgaagagagtcattggagagctatattagaa
gcaactgctgggcgactcaagggaaagcttcatcagatttacaatcaggatccgcacaac
tttattcctccaagtgtgtctttaatgcttgccgatgcttctttgcatcccaatgccgaa
ctcatctcaccacttcgactaaagcttggctgccgcgtaatgattaacagaaacctctca
cgaactgtatccaatggtagtgtaggtattgtagaggcgtttgctgcacccaacttggat
ctatttccccgccgccatgagacattaccaaaagcattccacacttggtctttggagagg
aatggattccagcgactgcctattgtccgtctactcagtggtgaagtggtacagctccca
cctctttctgtcatgattggtggcactccatcgacttatttttacggtcatgaactgttc
gtactgccactgcagttaggttacggcttcacagtacacaaagtccaggggctaacactt
gagggaactgtggtcctggattgtaagaaatttttcgagtgcccacatctcgtctacgtg
gcctgctcccgcgtacgttctatggaccaactgatcgtcaggaacgtgcggagtgatatg
attattgttcgacaaagtgctttggacttcacaaatgcactgagggatgcgtctgtgatg
tcaagcctcgatccgccggatggctgcacccgagcctcttgggtgcgccgtctcagtccg
ttacttgttggtttgacggactga
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