KEGG   Trypanosoma brucei gambiense: TbgDal_XI13310
Entry
TbgDal_XI13310    CDS       T06526                                 
Name
(RefSeq) splicing factor 3B subunit 1, putative
  KO
K12828  splicing factor 3B subunit 1
Organism
tbg  Trypanosoma brucei gambiense
Pathway
tbg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tbg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    TbgDal_XI13310
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tbg03041]
    TbgDal_XI13310
   03036 Chromosome and associated proteins [BR:tbg03036]
    TbgDal_XI13310
Spliceosome [BR:tbg03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    TbgDal_XI13310
 Complex B
    TbgDal_XI13310
 Complex C
   U2 SnRNP specific factors
    TbgDal_XI13310
Chromosome and associated proteins [BR:tbg03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    TbgDal_XI13310
SSDB
Motif
Pfam: SF3b1 HEAT_EZ HEAT_2 PPP2R1A-like_HEAT
Other DBs
NCBI-GeneID: 23866500
NCBI-ProteinID: XP_011780476
UniProt: D0A961
LinkDB
Position
11:3147375..3150674
AA seq 1099 aa
MADEDGSVEPTLKAHRWEMSSSASAAPTTSRWGAGTPRQRGGDTPKVVVNTELSAWRGHA
TPTPSAYAMDPAKTPTMRATGGATPVQGGQTPMFGGQTPVFGGQTPAFGSGTPMFTGATP
AAGMAFGATPNYQFEGTTPVQSHFAGGESQSAVTANIGAQARKLEMQWRVKNKRLTEEYL
DSILPPEFKLVEPPADYNPPPTEEPNFYELASKSLDVFVVNQNSDAAASMTYDIPESLGD
GMPQMQTQDAPVFEVLLKYHNVNPIPDEVLPSYMLMKNLFKIKNGDTNQRRIAMRYLLDK
ARIFGSGPLFQFTFHVWRSGILDVIEQHYYVDLVKGAISRLQKDVRGSSKEIVHMMEVLL
SAQERVLRDDGKEVLILLTRVVGYEAVFEAIKEDFAHAESGVRRHTAKVVAIIAFAVGPE
IAIKIIHGMSLSPVALARQTSARAITEMATILMHAITGELVELVPIFEKLLRDEPRVKRE
AASALAHVAEATYPYGIEELDSLVYIVREECKRGIGTTTGLFVRAFGALIPLMAPYDAQK
YTSDMLPTLVNQFNTPDDEHRRVLLQVVRQCVSADGVTVDFIRNVILRPFFEGFWTIRRV
AADRKTAGILIDTTVGIARRIGSTEILQYLVQDMKDENEHFQRMVVETVRRVIANVGAVG
VPDTLVALLMDGAIAAVKQDETGLNRVVMEGLATICNALGTRLKRHLRQIFDLIKSRRDM
PGMIRMQAAELAARIATTVKDAGGALFLQDLGRSLFDRLEDDEAAVMSANLKATRVILVE
LGAARYQPPVRELLKKLMYIIPNRNSNVQLNTILLVEEIATNCDEDVEAIHLQELATKGL
FELLDAHRRETRRACTRTFGVIARKIRPFAIILELVDNFKQDKRKIRICTAVALGAIARE
CGAFTVIPYLLNESKICEGEQVATIVQHSILKAVRYIFEAIGAAGKDFVYPLVPLLVRAL
TEMEIQHRRMAVEACRSIVLAVAGNDGFEDLVIHFLNFIHPNIVELLSRNETKISEERLK
MVTAVVGYYEAARLVIGSGKLFQYLLQGLFHPAKKVRDIYRRTYNMVYMASPEALVPYYP
RLGDDNEHTYVRHELEVLL
NT seq 3300 nt   +upstreamnt  +downstreamnt
atggccgatgaagacggttctgttgaaccgacgttaaaagcgcatcgctgggagatgtcc
tcctccgcatctgcagctcccacaacatcgcggtggggcgcggggacgccacggcagcgt
ggtggcgacaccccaaaagtggtcgtcaacacggagttgtcggcgtggcgtgggcatgca
acaccaacaccgagtgcgtacgcgatggatcctgcgaagaccccaaccatgcgtgccact
ggtggtgcgacaccggtgcaaggaggtcaaactccgatgtttggtgggcagacaccggta
tttggaggtcagacaccggcattcggtagtggaacacccatgttcacgggggcaacaccc
gccgctggcatggcctttggtgcaactccgaattaccagtttgaagggacaacgcctgtg
cagtcccactttgcggggggtgagtcacaatcagctgttacggctaacatcggagcccag
gcaaggaaattggaaatgcagtggcgcgttaagaataagcgtcttacagaggagtatctc
gactcgatccttccaccggaatttaagcttgtggaaccaccagccgattacaacccaccg
cccacggaagagcctaacttctacgagcttgccagtaagtcgttggatgtctttgttgtg
aaccaaaacagcgatgcggcagcttctatgacttatgatataccagaaagtctgggagac
ggtatgccacaaatgcaaactcaagatgcgcctgttttcgaggttctgctcaagtaccat
aacgtgaacccgatacctgacgaggtgcttccctcctacatgctgatgaagaacctcttc
aagatcaagaatggcgataccaaccaacggcggatcgccatgcggtacttgctagacaag
gcacgtatttttgggagtggacctcttttccagtttacatttcacgtttggcgttcggga
atcctcgacgtgattgagcaacattactatgtggaccttgtgaaaggtgcaatttccagg
ttacagaaagatgtccgtggctcgagcaaggagatcgttcacatgatggaggtcttgctc
tccgcccaggagcgggtgctacgagatgatggcaaggaggttctcattttgctcacgcgt
gtggtaggctatgaagcagtttttgaggcaattaaggaggactttgcccacgcggaaagc
ggtgtgcgtcgtcataccgctaaagttgttgcaataatagcgtttgctgtgggaccagaa
atagcgataaagataattcatggtatgtcactgtctccggttgccctcgctcgtcagacg
tctgcgcgggccataactgaaatggcaaccatcctcatgcacgccatcactggagaatta
gtggagcttgtacctatttttgaaaaacttctgcgggatgaaccgcgggtgaaacgggag
gccgcaagcgcgcttgctcacgtggcggaggcaacctacccttatggaattgaggagttg
gattccctcgtttatattgtgcgagaggaatgtaagcgcggcatcggtaccaccacgggg
ttgttcgtccgcgcgttcggtgcgctcattccgctaatggccccatatgatgctcaaaaa
tacacatcagatatgcttccaacgcttgtgaatcagtttaacacgccagacgatgagcat
cgccgcgttttgcttcaagtggtgcgacaatgcgtctcggctgatggagtgactgtggat
ttcattcgtaacgtcatcttgaggccgttttttgaaggattttggaccatccgtcgcgta
gctgctgataggaaaacagccggtatccttattgatacgacggtgggaattgcacggcgt
attggcagcacggagattcttcaatacctcgttcaagacatgaaagacgagaatgagcat
ttccaacgtatggttgttgagacggtaagacgtgttattgcaaacgtgggtgcagttggt
gttcccgacactcttgttgcgctgttgatggacggtgcgatcgcggccgtaaaacaggac
gagactggcttgaaccgtgtggtgatggaaggcctggcgaccatctgtaatgccctcggt
actcgcctgaagcggcacttacggcagatatttgatctcataaaaagccgtcgcgacatg
cctgggatgatccggatgcaggcagccgagctggcggctcgcattgcaacaaccgtgaag
gatgcaggaggagcgttgttcctgcaggatctggggcgaagcctctttgaccgcctagaa
gacgacgaggccgctgtgatgagtgccaacctcaaggcaacacgtgtcatcttggtggag
cttggtgctgcgaggtaccaaccgccagtgcgagagctcttaaagaagttgatgtacata
attccgaatcgcaatagcaatgtgcagctgaacaccattttacttgtggaggagatcgca
actaattgtgacgaggacgtcgaggccattcacttacaagagttggcgacgaaagggttg
tttgagctccttgatgcccaccgtcgtgaaacacggcgggcatgcacacgcacatttggt
gttattgcgcggaagattcgaccatttgccataatcctggagcttgtcgataactttaag
caggataaacgtaagattcgtatttgcacagcggtggccctaggggcgatagcccgcgaa
tgcggtgcctttactgttattccttacctcctgaacgaaagcaaaatatgtgagggggag
caggtggccacgattgtgcagcactccattcttaaggccgttcgatacatcttcgaagct
attggtgcagccggaaaggactttgtgtatcctctcgtaccgctgttagtgcgagcactg
acggaaatggagatccagcaccggcgtatggcggttgaagcatgtcggtcaattgtgctg
gcggtcgcgggcaacgacggattcgaggatctggtgatccacttcctcaactttatccac
cccaacattgtggaacttctttcgcggaacgagacgaaaataagtgaggagaggcttaag
atggtcacggcggttgttggttattacgaggcagcgcgcctggtaattggttcggggaag
ttgtttcagtatttgcttcaggggttattccacccagcaaagaaagtacgtgacatttac
cgtaggacatataacatggtatatatggcaagcccagaggcccttgtgccatattacccg
cgactgggggatgacaatgagcatacatatgtacggcacgagttggaggtgctactgtaa

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