Trypanosoma brucei gambiense: TbgDal_XI17460
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Entry
TbgDal_XI17460 CDS
T06526
Name
(RefSeq) hypothetical protein, conserved
KO
K14306
nuclear pore complex protein Nup62
Organism
tbg
Trypanosoma brucei gambiense
Pathway
tbg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
TbgDal_XI17460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbg03019
]
TbgDal_XI17460
Messenger RNA biogenesis [BR:
tbg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
TbgDal_XI17460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
Motif
Other DBs
NCBI-GeneID:
23866958
NCBI-ProteinID:
XP_011780890
UniProt:
D0AAC5
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All DBs
Position
11:complement(4092734..4094353)
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AA seq
539 aa
AA seq
DB search
MKGFAVRGRAPSGGGFGQPAVDTNATAAAPVLGFGSFGQSNTEAVAGVTNPFGQTANQSG
GSAPAAGMSGFGSGPSTGGFAVGAQSTSSATQPAPVLGQTVLSFGATPGKGEGGNSVVPT
GVGAAAAPSTSAAPTSGFSGFGSGAKTTLNPFGAGFGQASTTGTTATAPSTGGFGAATSA
VGQTPASGATPANTTFDGSASNPGNTGTNPTAGTATAVPAATTTVTNPPSADTVKAGAPA
AFGGFGATPPASGSNPSAAPTPFAGFGAGATAPTNPASTNATAGAATTGGGPFSSITKPS
ETGGNAPPATAGAGGAGLGPSLGAGVTGGNQSAGATGTVGAGDPTAISGKQASLELRGKM
LSTILAQFDKAFSKDYRDFSELSQLMMLRDRQIIERGNEILSHSSHLEEAIANADVTRQT
LIELKNKQAAIGTMLQRFEDAVQPIFAQVRPTFNSVDEAREETYTAVINLFDEVETLKLR
LQQCVRQHNGSVRHLRQSDDLAKFVGLIDCQLSAMEVCAAQASELEREVDLLLGKSTIA
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgaagggctttgctgtgcgaggaagagcgccatctggtgggggatttggacagccggca
gttgacacaaacgctactgctgctgctcccgtgctaggtttcggatcctttggacagagt
aacaccgaggccgtagcaggagtaacaaaccctttcggccaaaccgccaaccagtccgga
ggctcagctccggcagcagggatgagcggtttcgggagtggtccctccacaggaggattt
gccgtcggagcgcaatcaacaagcagtgccacacagccggcacctgtacttgggcaaacc
gtcctcagttttggagcgactccgggtaagggcgaaggtggcaactctgttgtgccaaca
ggggtcggcgctgcagcggcgcctagcacgtccgctgctcccacctcagggttcagtggc
ttcggcagtggtgcaaagacaacccttaatccttttggtgccggattcggccaagcttca
actacagggactaccgcaactgcacctagcacaggtgggtttggcgccgcaaccagtgcg
gttggacaaacaccggcaagtggggccaccccggcaaacaccacctttgacgggagtgca
tccaatcctggaaacaccggaacaaatccaacagcgggcaccgctactgcggttccagcg
gcaacgaccacggttacaaaccccccctcagctgacacagtcaaagccggtgcaccagct
gcatttggcggtttcggtgctacaccaccggcttctggaagcaacccgagtgcagcgcct
acgcctttcgctgggtttggggccggcgctaccgcaccaactaaccctgcctcaactaat
gctactgctggtgcggccaccactggaggcggtccctttagctccatcacaaaaccatct
gaaacgggtggcaacgccccgccagcaacggccggcgcgggaggagcagggttgggtccc
tccctaggcgctggtgtcactggaggaaatcaaagcgctggagctactggaacagtagga
gcgggcgaccccactgcaatttcaggtaagcaggcttcgttagagctcagggggaagatg
ctttcaaccatactggcgcagtttgataaagctttctctaaagattaccgtgacttttcg
gaattgtcacagctcatgatgctccgtgaccggcagataatcgagcgtgggaatgagatt
ctttcacactcgtcccaccttgaagaggctattgccaatgccgacgtcacacgacaaaca
ctcatagagctcaagaacaaacaggctgcaatcggaacaatgttgcagcgctttgaagat
gccgttcagcctatcttcgcgcaggtacgaccaacattcaacagtgtagatgaggcacgt
gaggaaacgtacacggctgtaattaacctttttgatgaagtagaaactttaaaacttcga
ctgcagcaatgtgtcaggcaacacaatggttctgtacggcaccttcgccagtcagatgat
ctggccaagtttgtcggcctcatcgactgccagttgagtgcgatggaagtgtgcgcagct
caggcatccgagttggagcgagaggttgatttgttgctagggaagtcaacgatcgcttag
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