Trypanosoma brucei gambiense: TbgDal_XI17500
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Entry
TbgDal_XI17500 CDS
T06526
Name
(RefSeq) histone deacetylase 2
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
tbg
Trypanosoma brucei gambiense
Pathway
tbg03082
ATP-dependent chromatin remodeling
tbg03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
TbgDal_XI17500
03083 Polycomb repressive complex
TbgDal_XI17500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tbg03036
]
TbgDal_XI17500
Enzymes [BR:
tbg01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
TbgDal_XI17500
Chromosome and associated proteins [BR:
tbg03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
TbgDal_XI17500
HDAC complexes
Sin3A-HDAC complex
TbgDal_XI17500
BRAF-HDAC complex
TbgDal_XI17500
REST complex
TbgDal_XI17500
SHIP complex
TbgDal_XI17500
MiDAC complex
TbgDal_XI17500
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
TbgDal_XI17500
Heterochromatin formation proteins
Other heterochromatin formation proteins
TbgDal_XI17500
Chromatin remodeling factors
NuRD complex
TbgDal_XI17500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
23866963
NCBI-ProteinID:
XP_011780894
UniProt:
D0AAC9
LinkDB
All DBs
Position
11:complement(<4099667..>4101367)
Genome browser
AA seq
566 aa
AA seq
DB search
MVVEPPASIPPVAVIVSTDVDAPASLPALQHNKLIIDMVRHYGCTPFPRKEVGGEAAFCN
DIFEWVDRNLPSVDVEDMTVFHDESYVRYLSLREVASGDDEHVLSFSGCSNVRGTPSKRF
ASRRCSAPLPPFVLFPQNGDKRFNLVGDSAPFSGMWRFTQAVVSGTLAATRLLAQPSRFA
AIHWMGGKHNAKRASAGGSCLVNDVVLAVLELRKLLPANRNVVLAVDLDAHHGDGAQEAF
LSDPRVVTLSLHAYGIGIFPGTGSLEEIGSGLGRGYTMNIPLPVGATDALVVPMAQRGIY
SAFRRAGVELGAVVVVCGSNSLSGDPYGLLNLTIGGYQRILRTLLTESASHSAKVLMLGG
SCNVDVVAARLAGVLTRDVFSCATALRNGETSYFSWSPDLSTDKGVEVPEDCEYFTMYGP
SFLMHSLPLAVVDEVHHFPPDSVLFSRMRQIAAKGERNSQMRDRAARKTVIEDDEEEESE
SEEEDTDEEEETESEGDENTSSQEGTDEEVVIDEDEETNGEGDEDTSSQEGNDEEEDTDE
TVLTDHVREGFPCLKERICGSLSEGQ
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggttgtggagcctcctgcttccatcccgccggtagcagtcatcgttagtaccgatgta
gatgcacccgctagtcttcccgcgcttcagcacaacaaactcatcattgatatggtgcgt
cattacggctgcacccctttcccccggaaggaagtaggcggtgaagctgccttttgtaat
gacatttttgaatgggtcgatcgcaatctaccaagtgttgatgtggaagatatgactgtg
ttccacgacgagtcatacgtgcgctatttgagtttacgcgaggtggcttcaggggatgat
gagcacgttctctcattttcaggatgcagcaatgtaaggggcacgccatcaaaaagattc
gcttctagacgttgctcagcccccctgccaccgttcgtgcttttcccacaaaatggggac
aaaaggtttaacctcgtgggtgacagcgcgcctttctctggtatgtggcgattcactcag
gccgttgtatcaggtacacttgcggccactcgcttgctcgcgcagccatcccgattcgcc
gctattcattggatgggtgggaaacataatgcaaagcgcgcttcagctgggggttcgtgc
ttggtcaatgacgttgttctcgccgtattagagttacgcaaacttctaccagcgaataga
aatgtggttcttgcggttgatcttgacgctcatcatggtgatggggcgcaggaggctttt
ctgtcggatcctcgagtagttaccctatctcttcatgcgtacggtataggaatcttcccc
ggaaccggttcgttggaagaaatagggagtggtttgggacgcggctacaccatgaacatt
ccactgcctgtgggggcaactgacgctcttgttgtgccgatggcccagcgtggcatctat
tctgcgttcaggagggccggggtcgagttgggagcagtagtcgtcgtttgtgggtcgaat
tccttatctggagatccctatggccttttgaatttaaccataggaggataccaacggatt
cttcgtacgctccttaccgagtctgcaagtcattctgcgaaagtgctcatgctaggtggt
agttgcaacgtggatgtggtcgcggcccgtctggccggggtactgacacgcgacgtattt
agctgtgcaaccgctctacgtaacggtgaaaccagctacttctcgtggtctcccgacctg
tcgacagacaagggtgttgaagttcccgaggactgtgaatattttaccatgtacggacct
tcctttttgatgcatagcctcccgctcgctgtagttgacgaagtccaccactttccacct
gattctgtccttttttcccgaatgcgccaaattgcagcgaagggggaacggaacagtcag
atgagggacagggcggcccgtaagactgtcattgaggatgatgaagaggaagaatcagaa
agtgaggaagaggacactgatgaggaagaggagactgagagtgaaggagatgagaatacc
agctcccaagagggtactgacgaggaagttgtaatcgatgaggatgaggaaactaacggt
gaaggggatgaagacactagttcccaagaaggcaatgacgaggaagaggacactgatgag
accgtccttactgatcacgttagagaagggtttccttgtctaaaagagcgcatctgtggg
agtctaagtgagggacagtga
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