Trypanosoma brucei gambiense: TbgDal_XI1760
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Entry
TbgDal_XI1760 CDS
T06526
Name
(RefSeq) vesicular transport protein (CDC48 homologue),putative
KO
K14571
ribosome biogenesis ATPase
Organism
tbg
Trypanosoma brucei gambiense
Pathway
tbg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
TbgDal_XI1760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tbg03009
]
TbgDal_XI1760
Ribosome biogenesis [BR:
tbg03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
TbgDal_XI1760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_16
AAA_5
AAA_22
AAA_33
AAA_14
RNA_helicase
Vps4_C
AAA_28
TIP49
ABC_tran
NPHP3_N
Mg_chelatase
AAA_11
AAA_2
Rad17
nSTAND3
AAA_17
AAA_18
ATPase_2
NB-ARC
NACHT
IstB_IS21
Zeta_toxin
Viral_helicase1
Parvo_NS1
AAA_7
AAA_3
Sigma54_activat
AAA_24
Sigma54_activ_2
FliT
Motif
Other DBs
NCBI-GeneID:
23866973
NCBI-ProteinID:
XP_011779323
UniProt:
D0A5V8
LinkDB
All DBs
Position
11:complement(<482047..>484167)
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AA seq
706 aa
AA seq
DB search
MEGLSSTSLLWLYAFTVYHIYLLIFNLPLVTVTVTVRKYFPLWDMSDQMRRLRRNRRQSD
RYFHGSSQRGNGIHERDRGEKSNFTERSRRNGGDDNGLEGSRKRKRAETKQDDDGGEEDT
PERLGVIPGITLDDMGGLAREIPIIKELIELPIRSPHLFSRLGADPPCGVLLHGPPGCGK
TKLVHAISGSLQVPLFFVSAPEIVSGISGDSEAKLRNLFLDAISAAPSIVFIDEVDTIAG
RRDQAQRGMESRIVGQLLTCMDQVAQAWRQHNKVVCVMGATNRPEALDTALRRAGRFDRE
ISLGIPTIDERHSILKIICQKLHLAEDVDFFELANMTPGYVGADLHLLVKEACILAIRQK
HNELEEKNKLDDPNAEELVSFVVTRDNMKEAVKRVQPSAMREGFTTIPNVTWDDIGALED
VREELITSILQPIRSPKLHRRFGLDHPVGVLLYGPPGCGKTLVAKAIANQSGANFISIKG
PELLNKFVGESERSVRMVFARGRASAPCVLFFDELDALAPRRGSDRANPSSERVVNQLLT
EMDGVEGRESVYVIGATNRPDMIDPAMLRPGRLDKMLYVPLPSVEQRASILETHARRYPI
DASVDLPSIARDERLQGFSGADLAALMREASLHALKNIYRGATEEMLEQMERDASGEAVA
NAQLPSVTMEDFEVSMSKVKPSVSAKDRMDYEILHKQLARDAKGPC
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggagggcctttcatctacctctttgttgtggttatatgcctttaccgtatatcacatt
tatttacttatttttaatttaccgctggtcactgttacggtgactgttagaaaatatttc
ccgctgtgggatatgtctgatcagatgcggcggctcaggcggaacagacggcaaagcgac
cggtatttccatggctcttctcaacggggaaatggcatccatgaaagggaccgcggggaa
aagagcaacttcacagaacgtagtcgaagaaatggtggtgacgataacggattggagggt
tccaggaaacggaaacgtgcggaaaccaaacaagacgatgatggaggtgaggaagacaca
cccgaaaggctcggcgtcatcccgggtattaccctcgatgacatgggcgggcttgcaaga
gaaattccaataattaaagaactaattgaattgcccatccgctctccccatttattcagc
cgcttaggcgccgatccgccctgcggtgtgctgctccatggaccaccggggtgcgggaaa
acgaagcttgtgcatgccatttcagggtccctgcaagtcccactctttttcgtgtccgct
cccgaaattgtctctggcatcagcggtgatagcgaggccaaactgcgtaacctttttcta
gatgccataagcgcggctccaagcattgtattcattgatgaggttgacaccattgcaggt
cgtcgcgatcaggcgcagcggggtatggaaagccgcatcgtcggacaacttctgacatgc
atggatcaggttgcccaggcgtggcggcaacataacaaagttgtttgtgtaatgggggct
acgaatcgtccagaggcacttgataccgccttgcgccgtgcgggacgtttcgatcgtgaa
atctctcttggcatccccaccatcgacgaacggcacagtatcttaaaaataatttgtcag
aagcttcatttggcagaggacgtggactttttcgaactggcgaacatgacacccggttac
gttggtgcagatcttcacctgctggtcaaagaggcatgcattcttgcaatccggcagaag
cacaacgaactggaggaaaagaataaactggacgatcccaacgccgaggaactcgtgtct
tttgttgtgacacgtgacaatatgaaggaggccgtcaagcgcgtgcagccaagcgcaatg
agggagggcttcacgacgatccccaacgtaacatgggatgatattggtgctcttgaggat
gttcgcgaagagcttatcaccagcattctccagccaattcggtcgccaaagcttcaccga
cggtttgggttggatcatccagttggtgtgctgctctacggcccgccaggttgtggcaaa
acactggtggcaaaggctatagccaaccagtcaggcgccaattttatatccattaaagga
cctgagttgctgaataaatttgttggtgagagtgagcggagtgtgcgcatggtttttgct
cgtggtcgtgcaagtgctccttgtgttctcttctttgatgagctggatgccctcgctcca
cggcgcggctccgatcgggcaaacccaagcagtgagcgcgttgtaaaccagttgctgaca
gaaatggatggtgtggagggacgtgaaagtgtgtatgtcattggggctactaaccgtcca
gatatgattgatccggctatgcttcgtcctgggcgcctggacaaaatgctgtatgttcca
cttccctccgtggagcagcgtgcctctattctagaaacacatgcacgccgttatccaatt
gacgcgtcggtggatctcccgagtattgcccgcgatgagcgcctccaggggtttagtggt
gctgacttggccgcacttatgcgggaggcctccttgcatgcgctaaagaatatctaccgt
ggcgccaccgaggagatgctggagcaaatggaacgagacgccagtggtgaggcagtggcg
aatgcgcagctgccctccgttaccatggaggacttcgaagtcagcatgtctaaagtcaag
ccatctgtttcagcaaaggacagaatggattatgaaatactgcacaagcagctggcccga
gatgcgaagggcccttgctga
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