Trypanosoma brucei gambiense: TbgDal_XI18270
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Entry
TbgDal_XI18270 CDS
T06526
Name
(RefSeq) DNA repair helicase and transcription factor protein, putative
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
tbg
Trypanosoma brucei gambiense
Pathway
tbg03022
Basal transcription factors
tbg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
TbgDal_XI18270
09124 Replication and repair
03420 Nucleotide excision repair
TbgDal_XI18270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tbg03021
]
TbgDal_XI18270
03400 DNA repair and recombination proteins [BR:
tbg03400
]
TbgDal_XI18270
Enzymes [BR:
tbg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TbgDal_XI18270
Transcription machinery [BR:
tbg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
TbgDal_XI18270
DNA repair and recombination proteins [BR:
tbg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
TbgDal_XI18270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
ResIII
Helicase_C
Helicase_C_3
DEAD
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
23867048
NCBI-ProteinID:
XP_011780971
UniProt:
D0AAK6
LinkDB
All DBs
Position
11:complement(<4285094..>4287427)
Genome browser
AA seq
777 aa
AA seq
DB search
MECLFLEERIKKEGCVVLFAEAFRPSFANIQGFLTTIAEPVSRLSLMHEYRMTYFSLGAA
ASASISVSEVIQFLDGHVYFFRDKCFASYRESVCAFAEMYMSRCNLARVVIDESRTLLEC
KDIVTAKTLLKDRVVRSLCCQPKEIVGEDACPHFLLKSRAAARVVAERCVLLGYPLQQQY
EYEKDTSIRNVNIALKSQTRPRPYQIAAVDAAASDGALRSGCIVLPCGSGKTLVGIMLLC
KVKKPTLILCAGGVSVEQWRNQILEFASVCPPANNEEGDPSNSTTGEKVRTAAVGAARIS
CLTGKQKDEITDETDIVLTTYSMLVTAHKAQARCQVEGFEMNADGRGRNPRRANPKERLF
QPYGLLIMDEVHMMPADAYKDSLGFINAKGVVGLTATYVREDSKIRDLFHLVGPKLFDIS
WERLASSGYLAHVTCIEVLTPLARRFSLEYLERSSELTSPQHGTPLLVMLAAANPNKMLC
VMEIVKRHVAESSKILVFCDHIMLLKEYSKLLGAPVVCGDTPHRERLMIFSDFQSTSKVN
VVCLSRVGDVSVNLPSANVVVQVSSHGGSRRQEAQRLGRILRPKEKASNGKPTDAWFYTV
ISTDTVEMSYAAHRTAFLVDQGYTCSVTEFNPDGAPEAAVEGVDDTAPGDVVSIRQAKLR
GTFKKQELKCSVASPTAQGSVNPRSLDYQEKLLCRVVASWELDYQNATSQQNEPGVANDT
ATGLIDKKMKRARDETAEDIKREWNSGAQTTQPRGDFCRLPLQRLVGANDDVVYHES
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atggagtgcctgttcttggaggagagaatcaagaaggaaggttgtgttgtgttgtttgcc
gaggcattccgaccttcgttcgctaacattcaggggtttctcacaactatcgcagagccc
gtttcacgactttctctgatgcacgaataccgtatgacatacttttcactgggtgcggct
gcctccgccagcatatcggtgtcagaagtaattcagttcttggacggccacgtttacttt
tttcgtgataaatgttttgcttcctaccgagagagtgtttgtgcctttgctgagatgtat
atgagtcggtgtaacttggcacgtgtagtcatagatgagtcgcgaacgttgctggaatgt
aaggatattgtaacggcaaaaacattgttaaaggaccgagtcgtgcgatccctctgttgc
caacccaaggaaatcgttggtgaggatgcgtgcccccatttccttcttaagagtcgtgcc
gcggcgagggtggtggccgagcgctgcgttctgcttggctacccgctacaacaacaatac
gagtatgagaaggatacaagcattcgtaacgttaacattgcgttgaagtctcaaactagg
cctcgcccataccagatcgctgctgttgacgccgcggcgagcgatggggctttgcgcagt
ggttgtatagttcttccctgtggatctggtaagacacttgtcggtatcatgctcctttgt
aaggtaaagaaaccaacactcatactttgcgcagggggcgtgagtgttgagcagtggaga
aaccagattttagagttcgcaagcgtttgtccccccgcaaacaatgaagagggcgatccg
tcgaatagtaccactggcgagaaggtgcggacagcagcagttggggctgcacgcatctca
tgtctgaccggaaagcagaaggatgagatcacggatgagacggatattgtgctgacgacg
tacagtatgctggtgactgcgcataaggcccaggcgcgctgccaggtggagggcttcgaa
atgaacgctgatggacggggaagaaacccccggagggccaatcctaaggagcggctgttc
caaccgtacggtcttcttatcatggatgaagtgcacatgatgcctgcggatgcgtacaag
gatagcttgggtttcatcaacgctaaaggcgttgtggggctgacggcaacgtatgtgcgg
gaggattccaaaatacgtgacctttttcatttggtaggaccaaagttgtttgacatttcg
tgggaaagactggcgagtagtggttatttagctcacgtgacctgcatcgaggtgctgacg
ccgctggcgcgccgcttcagtcttgagtaccttgagcgcagcagcgagcttacatcgcca
caacacggtacaccgcttctcgtgatgcttgcggctgctaaccccaacaagatgctgtgc
gttatggagatcgtcaagagacatgtcgccgagtcctcgaagattctcgttttctgtgac
cacatcatgctactgaaggaatacagcaagcttctcggtgcacctgtggtttgcggggat
acgcctcatcgggagcgcctgatgatattctctgactttcagagtacctcgaaggtaaac
gttgtttgcctgtcgcgtgtaggagatgttagtgtaaaccttccaagcgcgaatgttgtg
gtgcaggtatccagtcacggtggaagcagacggcaagaggcacagcgcctcgggaggatt
ctgcgccccaaagaaaaagcgagcaatggcaaacccaccgacgcttggttttacactgtg
atcagcacagacaccgttgagatgtcgtacgcagcacaccgaactgcattcctcgtggat
cagggttacacgtgtagtgtcacggagtttaaccctgacggcgctccggaggctgctgtg
gagggggtagatgacacggcaccgggtgatgttgttagtattcgtcaggcgaaactccgt
ggcaccttcaagaaacaagaactaaaatgcagtgttgcttcacccactgcacagggatct
gtcaatccacgtagcctggactaccaggagaagcttctttgccgtgtggttgcgagttgg
gagttggattaccaaaatgcaacgtcacagcagaatgagccaggtgtggcaaatgacaca
gcaactggtttgatagacaagaaaatgaagagggcgagagacgaaaccgctgaggatatc
aagcgcgagtggaactcgggcgctcagacgacgcaaccacgtggggacttttgtcgcttg
ccgctgcaaaggttagtaggcgctaacgatgacgttgtctatcatgagagttag
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