Trypanosoma brucei gambiense: TbgDal_XI2620
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Entry
TbgDal_XI2620 CDS
T06526
Name
(RefSeq) hypothetical protein, conserved
KO
K14284
nuclear RNA export factor
Organism
tbg
Trypanosoma brucei gambiense
Pathway
tbg03008
Ribosome biogenesis in eukaryotes
tbg03013
Nucleocytoplasmic transport
tbg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
TbgDal_XI2620
03015 mRNA surveillance pathway
TbgDal_XI2620
03008 Ribosome biogenesis in eukaryotes
TbgDal_XI2620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbg03019
]
TbgDal_XI2620
03009 Ribosome biogenesis [BR:
tbg03009
]
TbgDal_XI2620
Messenger RNA biogenesis [BR:
tbg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
TbgDal_XI2620
mRNA cycle factors
Stress granule specific factors
TbgDal_XI2620
Ribosome biogenesis [BR:
tbg03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
TbgDal_XI2620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NTF2_MEX67
LRR_NXF1-5
LRR_9
NXF_NTF2
LRR_4
Motif
Other DBs
NCBI-GeneID:
23867234
NCBI-ProteinID:
XP_011779409
UniProt:
D0A644
LinkDB
All DBs
Position
11:653167..654720
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AA seq
517 aa
AA seq
DB search
MLKLVFEKQQQRVYNAETGVLNLTQFKEIPDLTDVAGSINFNTQAFCQALCSTIKSLIVP
PPSAIQLKGNGILSVSHLAMQLEKADLHLTLRAISLEANLIKSVESLQELKKFTNLREIV
LRDNPIANRSDYRTTIKKLMPSLIGLDGESICVPPLSLPWPQFSPTGYSEAQKHVLQFIQ
CGLLNPLEGDGASGVAHGVDAVSDLYAANAVLTLSLSSPEVAVSTPMRTMNGAAGVPQQR
NVIRDIVSLRLKQTESNHNLLHGVKSTVVALGRTKVCSQMEHWLYPKTFRVHHYLHSSAS
TVFLDNSYLTGPSPTAMKVPVTIVTLHGTMTWNNTGVPGDATTIGPMTIRRNFTRVLSVT
QGDAGRWLITNDMVSLYLTPSGSSASSKSGNGVPETTQLSECRILIDPRSDRSRAEVLSR
KKDVPVEVIMALCQHVGNDAELFTVLDDIRGVPLSAFEHCANLAGENIMESIQMCRLVNL
FGMAPQNALEMLRHNNGNWSDTVAAVAATAPVAAVPQ
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagttggtgtttgagaaacagcagcagcgggtgtataacgcggaaacaggggtc
ttgaacctgacgcagtttaaggaaattcctgacctcacggatgtggcgggatccatcaac
tttaacacacaggctttctgccaggcattgtgttcgacaataaagtcgcttattgtgcct
cctccatcagcaattcaactgaaaggcaatggcatattgtcggtgtcacatctagcgatg
cagttggaaaaggcagaccttcatctgacgcttcgtgccatttcattagaagccaaccta
atcaagtcggttgagtcattgcaagagttgaagaaattcaccaacttgcgggagattgta
ctgagagacaatcctatcgcaaatcggagcgactatcggacaactattaagaaattgatg
ccgtcgttaattggtttagatggagagtccatatgtgtgccccctttaagtctaccgtgg
cctcagttctctccgacgggatacagtgaggcgcagaagcatgtgctgcagttcatacaa
tgcgggttgttaaacccactggaaggcgacggtgcttccggagttgcacacggtgtagac
gctgtttcggacttgtacgcggcaaatgcggttttgaccctctccctctcttcgccagaa
gttgctgtaagcacgcccatgcgcacaatgaacggtgcggcgggtgtgccgcaacagcgg
aacgtaatcagggatattgtgagtcttcggttaaaacaaactgaaagtaatcacaacctt
ctgcacggtgtaaagtcgactgttgttgcgcttggtcggacgaaggtgtgttctcagatg
gagcactggttgtacccaaagacctttagggttcatcattacctccatagcagtgctagc
accgtctttcttgacaattcgtacctcacaggcccgtcgcccacagcgatgaaagtaccc
gtgacaatagtgacactccatggcaccatgacgtggaacaacaccggtgtaccgggtgat
gcgacaactattggcccaatgaccattcggcgcaacttcactcgtgtgttaagtgttaca
caaggggatgcgggacgctggctaatcactaatgacatggtgtcgttgtatttgacgccg
agtgggtcatctgcatcgtcgaaaagtggcaacggagtgcctgaaacgactcaactgagc
gagtgccgcattctgatcgacccacgcagcgaccgtagccgtgcggaggtactcagccga
aagaaggacgtaccggtagaggtgattatggcattgtgtcaacacgttggtaacgatgcg
gagttatttaccgtgttggatgatatccgcggcgtgccactcagtgcctttgaacactgt
gccaacctagcaggggagaatatcatggaaagcattcagatgtgtcgtttagtgaatctt
ttcgggatggcaccacaaaacgcattggagatgcttaggcacaataacggtaactggagt
gatactgttgctgcggttgctgctaccgcgcctgtggcggcagtcccgcagtga
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