Trypanosoma brucei gambiense: TbgDal_XI5010
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Entry
TbgDal_XI5010 CDS
T06526
Name
(RefSeq) ATP-dependent RNA helicase, putative
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
tbg
Trypanosoma brucei gambiense
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tbg03400
]
TbgDal_XI5010
Enzymes [BR:
tbg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TbgDal_XI5010
DNA repair and recombination proteins [BR:
tbg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
TbgDal_XI5010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
AAA_19
AAA_30
SWI2_SNF2
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
23867499
NCBI-ProteinID:
XP_011779647
UniProt:
D0A6T2
LinkDB
All DBs
Position
11:complement(1252528..1259121)
Genome browser
AA seq
2197 aa
AA seq
DB search
MKSNIKDKKTPLTLSLGKHLSLRFFFLGGTLLAAHARLCQADRRESMSHRGSCMQCGSFD
EGAEDPRDRQWYCNTCWAAYNDSRKKGRWENREGCDDRRNNIGANHRRRNPNAGSRGATE
TAGAKGGSKAVDKQHRYKAEEPERKGPAASPSWYHSAQDAVRRLESVLGSFAPFRQDYRH
HLMPDATSLLDDLQMLQVAERSSFSNREGEVRRQHTCSFVGQFMQRHQSITVIAHTGEPL
SPRGNRVGGVSRSAYLENNKVSLDLLLSSVDDIVSQVYVRFDEDMTRIILNALDRVTACE
TQKQRDAVRVRVIEELLQVLGVEHCELIQCVMHRPRDIFLRLLEEFCTLDGGNDGGTTGD
SAAPDHRGLTVRFVKTAKQRSVLREAEFDRRGSADEQWLAHMTQRYRQLVRESELDEFFK
RDLSINGSCPSFASGATVLQREDHIRVHVPPPERKVLPEEDRVCIATSLPEWTHAAFLNI
THLNTIQTSLFRTAFHTSQNMLVCAPTGAGKTVCGLLVMLRCIEEQRVDGVLDRNFKIIF
IAPMKALAQEMVENFSRRLAPFAMEVRELTGDMQLTKRELAQTQVIVTTPEKWDVITRKQ
ANEELTTQVRLIIIDEIHLLNEDRGPVLEAIVARTLRQGELASEQKHRTRLVGLSATLPN
YKDVANFLRVDLAEGLKVFGAEYRPVPLEQSFIGLRMGLKDKERRMDQLAYEEVVRNVRE
GHQVMVFVHSRKQTVALARFFMEEANVRGHEALFKQDETVPKEAQKLGCSLQGRDLSNLF
AAGFGAHHAGLIRYDRTSTENLFRKGFIRVLVCTSTLAWGVNLPAHSVMIRGTHIYDPKR
GGLVSMSVLDVMQIFGRAGRPQYDTSGHGTIISDEKEVGRYLRLLACALPIESKLQEGLC
DHLNAEIHAGTISSIVEGSGWLEYTYLWQRLRVNPLMYGLKVSDVRQDPKLKKIRYEIVS
KAAEELADAGMIRYNPQTGAVDTTDLGRIASHYYISYKSIATFNTKMRRPDESWIDSLDL
GAAMNVVACADEFSQLRVRQEELDELKKLHALLPRQVQHYGIVGESADETSVEWKVTTLM
KSYISRINVDMHSLASDVNYVVQNAPRISRSLFEIEMQRGHPLTTAVFLSLCKCLEQRRW
EFEHPLLQFGVDMTDAVYRNIEKKRPSMSLLQEMSASDIGSLVQNQRFGDVIARLVASFP
TVSLAVDIQPITCTILRVKVTISATFSWNSRYHGSVEPFWLLVEDQDNHFIFHHELISLK
RKEVEAGLPQVVNLSVPIVAEYDMYSVRLYSDRWLGSQEEYSFSIGHLHLPDDSQKTTPL
LPLAPLRREVIPEKYHTIYESFREFNPVQTQVFHAMYHTDSSIFLGAPTGSGKTIAAEMS
ILRLFEKYPVGSKVVYIAPLKALVKERVKDWMARFSRRLGRRVLELSGDVTPDITALVQA
DILCTTPEKWDGLSRSWQVRRYVTAVRLVIFDEIHMLGSDRGPILEVIVSRMRFIGWHRN
APIRLIGLSTAVANPADLTSWLGVSHKWAVFNFDPSVRPVPMRVHIAGYHGRNYCPRMAA
MNKPVYNAICEKSPNKPVIVFVSSRRQTRLTAMALIGFLVMEQNTAKFVRMDVEEVNAYV
AKVSDPYVKHCMQFGVGVHHAGLLEGDRTVVESAFLKGKLQVLVATSTLAWGVNFPAHMV
VVKGTEYYDGKTKTYVDFPITDVLQMIGRAGRPQFDTEGVAQVLCHEPKKGFYRKFLYDP
FPVESALHRQLHTHINAEIVSGTIKTRQDAVDYLTWTYMFRRIVKNPSYYGLSDRSPASV
TIFMSTLVANVLDELEQCGCIEHCQSDGCDADADPNALTYTVLGKLCSYYYLSHKTVYYF
DTNINENSTHVDVLKALCEADEFEELPVRHNEDKLNLTLSQALPLPIKANNADSPHVKAF
LLFQAHFERCNLPISDYYTDQKSTLDNAMRVVQAMVDITANNGHLHTSLRCMSLLQCIVQ
GLWWHSNTLLQIPHVTDTMLPIIAEHCAGLHHVSQLVNSPLSVLTKLHETLCDHCGLGDK
EVREAMEAVRSFPLIDVHIRLSRTVVDDGHATEEVMVKRGDGMDDDEEGDGYELTAYLTR
LSTPIRHVVAPHFTKSKEEQYWLVIGSEHTGELIAMKRVGRLMGNATTATTLRFDWDDDW
TSFAENGSVPLSLYVVCDSYVGLDQQYNFRVSVPSRE
NT seq
6594 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcaatatcaaagacaaaaagacccccttaactctatctttaggaaaacatctt
tctttaaggtttttttttttggggggcaccttattagctgctcacgcacgcctctgtcag
gccgacaggcgggagagcatgtcccaccgcggctcgtgcatgcaatgtgggtcattcgac
gagggggctgaagacccacgcgacagacagtggtattgtaacacctgttgggcggcttat
aacgacagcagaaagaagggccgatgggaaaacagagagggatgtgacgataggcgcaac
aacattggagcaaatcataggagacgtaaccctaatgccggtagccgaggcgccaccgaa
actgctggggctaagggcgggtctaaagctgtggacaagcaacatcgatacaaggcagag
gaacctgaacggaagggccccgcagcgtcaccgagctggtatcatagtgctcaagatgct
gtccggcggttggaaagcgtgcttgggagttttgcaccatttcgtcaggactatcgtcac
catctcatgcctgacgcaacgagtcttttagatgatttacagatgctacaggtagctgag
agatcatctttcagtaaccgcgaaggtgaggtacgtcgacaacatacgtgctcattcgtt
gggcagtttatgcagcgacatcaatcaataacagtgattgcgcatacgggagagcctctt
tccccccgtggcaatcgtgttggtggagtgagccgctctgcgtacctggagaataataaa
gtatcgctggatttgttgttatcaagtgtcgatgacattgtgtcccaggtgtacgttcgt
ttcgacgaggacatgacgcggattatccttaatgcgcttgacagagtgacggcttgcgaa
acgcagaagcagcgggatgcggtccgagtgcgtgttatagaagaactgttgcaggtgctc
ggcgtggagcactgtgagttgattcagtgcgtgatgcaccgtccacgcgacatcttccta
cgtcttttagaggagttctgtactctcgacggagggaacgatggtggtactaccggtgat
tcggcggctccagaccaccgtggcctcacagtacgttttgtgaaaacagcaaaacagcgt
tcggtgttgcgagaggctgagtttgaccgtcgtggtagtgcggacgaacagtggcttgct
cacatgacacagcgttaccgacaactcgtacgtgaatcggagctggacgagtttttcaag
cgtgatttaagcattaacgggtcttgcccttcctttgcctctggtgccacggttctccag
agagaagatcacattcgggtccacgtgccgccaccagagcgcaaggtgctaccagaggag
gatcgtgtttgcatcgctacatcgcttccggagtggactcacgcggcatttttgaatatc
acccatcttaataccatacagacctccctgtttaggaccgcctttcacacatcgcaaaac
atgctcgtgtgcgcacctacgggggctggtaaaaccgtctgcgggctactggtgatgtta
cgctgcattgaagaacaacgtgttgacggtgtgttggatcgaaacttcaagataattttc
atcgcccccatgaaggcccttgcgcaggaaatggtggaaaacttctcccgtcgactggct
ccttttgctatggaggttcgtgaacttacgggtgacatgcaacttacgaagcgggaactc
gcgcaaactcaggtgattgtaacaaccccggagaagtgggatgtcatcacgaggaagcag
gctaacgaggagctcactacgcaagtgaggcttattatcattgacgaaatacatctgctg
aacgaggaccgtgggccggtgctagaggctattgttgctcgcacgcttcgccaaggcgag
ctcgcttcagagcagaaacaccgtacccgtctagtcggcctttccgcaacgttaccgaac
tataaggacgtagcaaattttttgcgagtggatcttgccgagggattaaaggtgtttggg
gcagagtaccggcccgtgccgttggagcagtctttcatcggtcttcgtatgggtttaaag
gacaaggaacgccgtatggaccaacttgcctacgaggaagtcgtccgcaacgtacgggag
ggtcatcaggttatggttttcgtgcactcacgcaagcaaactgttgcactggctcgcttt
tttatggaggaggcaaatgttcgtggacatgaggccctctttaaacaggacgaaacggta
cccaaagaggcacagaagctgggttgcagcctgcaggggagagatctttctaatcttttt
gccgcggggtttggtgctcatcacgctggtctaatccgttacgatcgcacgtccacggaa
aacttgtttcgtaaggggtttataagggtgcttgtatgcaccagcacgcttgcttgggga
gtgaacctgcctgcccactcggtgatgattcggggaactcatatctacgacccgaagcgc
ggtggtcttgtgtccatgtcggtgcttgacgtaatgcaaatatttggccgagcggggaga
ccgcagtatgatactagtggtcacggtaccatcatatcagatgagaaggaggttggtcgc
tatctccgtttactagcttgcgccctgcccatagaaagcaagttgcaggaagggttgtgt
gatcacctcaatgcggagatacacgccgggacgatatcatccattgtggagggttccgga
tggctggaatacacgtatttgtggcagcgcctacgggtaaatccgctgatgtacggtttg
aaggtatcggatgtgcggcaggacccaaagttgaagaaaatacgctatgaaattgtcagc
aaggcagctgaagagttggcggatgccggtatgatacgctacaacccccaaacaggtgct
gtggacaccacggatttggggcgtatcgcgagccattattacatctcttacaaatctatc
gctacgtttaacacaaaaatgcggcgaccggatgaatcatggattgacagccttgatctt
ggagctgcaatgaacgtcgtagcgtgtgctgatgaattttctcagctgcgtgtccgccaa
gaagagctcgatgaactcaagaaattgcacgctttactgcctagacaggtgcaacactac
ggtattgtgggtgaaagtgccgacgaaacatctgtagagtggaaggtaacaacactcatg
aagtcttacattagtcgcatcaatgttgacatgcattcccttgcatcagatgtgaattat
gttgtacagaatgctcctcgcatatcacgatctctcttcgagatcgaaatgcagcgcggc
catccactcacaactgccgttttcctttccctgtgcaagtgcttggagcaacgtcgctgg
gagtttgagcaccctcttttgcagtttggcgtggacatgacagatgctgtttaccgaaat
attgaaaagaagcggcccagtatgtccctcctccaggaaatgtcagcaagtgacataggt
tctctggttcagaatcagcgttttggtgatgtgattgctcgactcgttgcttcattcccc
acggtctcacttgcggttgacattcaacccattacatgtactattctccgtgttaaggtg
acaatctctgcaacattctcgtggaatagtcgatatcacggctccgtggaacctttttgg
ttactggttgaagatcaggacaaccacttcattttccatcacgagcttatctcgttaaaa
cgtaaagaggtggaggctggcctaccacaggtcgtgaatctctctgttccaatcgtagca
gagtatgatatgtattccgttcggctttacagcgaccggtggctcggttctcaggaggaa
tactccttttctattggccatctgcacctacctgatgactctcagaaaacgacacccctg
cttcctcttgcgccgcttcgccgtgaggtgataccggagaagtaccataccatctatgag
agtttccgggagtttaaccctgtacagacgcaagtgtttcacgccatgtatcacaccgac
agcagcatcttccttggagctccaaccggaagcggaaagactattgctgctgaaatgtct
atactacgccttttcgagaaatatccagtaggatctaaggttgtgtacatagcgccgctt
aaggcgctggtaaaagagcgggtgaaggactggatggcccgtttttctcggcgcttgggc
cggcgtgtcttggagttatctggtgatgttacacctgatatcactgcacttgtgcaggca
gacatactgtgcacaactccagagaaatgggacgggctttcacggagttggcaggtaagg
cgctacgtcacagcagtgcggcttgtaatttttgatgaaatacacatgctggggtccgac
cgtggtcctattcttgaagtgattgtaagtcgtatgcgctttattggttggcatcgcaat
gctcctattcgtctcattggcctttctactgctgtcgctaatcccgcagatcttacttcg
tggttgggcgtttcgcacaagtgggcagtgttcaacttcgacccgtcggtgaggccggtg
cccatgcgggtacatattgcggggtatcatggcaggaattactgtcctcgaatggcggct
atgaataagcctgtttacaacgccatctgcgagaagagcccaaacaagcccgtcattgtt
tttgtttcctctcgtcggcaaacgaggcttacggcaatggcactaatcggttttctggtg
atggaacagaatactgccaagtttgtacgtatggatgtggaagaggtcaacgcgtacgtg
gcaaaagtaagcgacccatacgtaaagcactgcatgcagtttggcgttggtgtgcaccac
gccggtttgctggagggtgatcgcacggtggtggagtctgcttttctcaagggcaagctg
caggttctagtggcaacctccacacttgcgtggggagtcaacttccccgcacatatggtg
gttgtgaagggtacggagtattatgacgggaagacaaaaacatatgtggacttcccaatt
actgacgtactacagatgattggccgtgcgggaaggcctcagttcgatacggagggtgtg
gcgcaggtgctttgtcacgagccgaagaagggtttctaccgaaaatttctctacgaccct
ttcccagttgagagcgcacttcacagacaactacacactcacatcaatgctgaaatcgtg
tcaggaacgattaagacccggcaagacgctgtagactacttgacgtggacctatatgttt
cgtcgtatcgtgaagaatccgtcgtattatggactttcggatcggtcaccagcgtcggta
acgatctttatgtccacccttgtcgccaatgttcttgacgaacttgaacagtgtggatgt
atcgagcattgccaaagcgatgggtgcgacgcagatgctgatcccaatgcgttgacttac
actgtgcttggcaagctgtgttcttactactatctttcacataaaacagtttattacttc
gatacaaatatcaatgaaaatagcacccacgtggatgtcctgaaggcactatgtgaagcg
gatgagtttgaagaacttcccgtgaggcacaatgaagacaaactgaatcttactttgagc
caagcccttccactccccatcaaagcaaacaatgcggactctccgcacgtgaaagcgttt
cttctcttccaggctcactttgagcgttgcaacctgccaatatccgactactacaccgat
caaaaatcgaccctcgacaacgccatgcgtgttgtgcaggcgatggttgacataacagca
aataatggccacttacacacgtcgctccgctgtatgtctctcttacagtgtattgtgcaa
ggattgtggtggcactccaacacactgttgcagatacctcacgtgaccgacacgatgctt
cctattattgcggagcactgtgccggactccatcacgtatcacaattggtgaacagtcca
ctgtcggtccttacgaaactccatgagaccttgtgcgaccactgtggtcttggggacaag
gaggtccgcgaagcgatggaggcggtgcgcagctttccattgatcgatgtgcatatacgc
ctgtctcgtacggtcgttgatgatggtcacgcaactgaagaggtgatggtcaagagaggt
gatgggatggacgatgacgaagagggggatggttatgagctgacggcgtacctcacaagg
ctttccacgcctattcggcatgttgtcgcaccccactttactaaatcgaaggaagagcag
tactggttggttattggaagtgagcatacaggagagttgattgctatgaagcgtgtgggc
cgcttgatgggtaatgccacaacagcgacaacacttcgatttgattgggacgacgattgg
acctcttttgcagaaaacggctcggtgccccttagtctgtacgttgtatgtgattcctac
gttgggctagatcagcagtacaactttagggtctcggtcccatctcgcgagtga
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integrated database retrieval system
