Trypanosoma brucei gambiense: TbgDal_XI5620
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Entry
TbgDal_XI5620 CDS
T06526
Name
(RefSeq) ATP-dependent DEAD/H RNA helicase, putative
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
tbg
Trypanosoma brucei gambiense
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tbg03009
]
TbgDal_XI5620
Enzymes [BR:
tbg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TbgDal_XI5620
Ribosome biogenesis [BR:
tbg03009
]
Eukaryotic type
Pre-60S particles
Helicases
TbgDal_XI5620
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
23867566
NCBI-ProteinID:
XP_011779708
UniProt:
D0A6Z3
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Position
11:1407780..1409585
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AA seq
601 aa
AA seq
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MSGSPSDVVRKAWSDIALDSRLVEAIKKLKWKAPTPVQSACIPLAMKGRDLAIQSQTGTG
KTGAFLIPVIQRIITENERACGRRNAQNPVALILLPSEELCKQTVEVANALTRYVKPRII
VNDLTSRVSTANALRLTAAPILVSTAASLGKLCRNGSVTSDDMKPLRCVVIDEADLIMSI
AEGSLRAVQSVLPTSAQTILASATLTDGVAQIKGQLLHNPITVSLKPDDGEKEPTGCEGP
VGAEDVVLESRVTVRGGAAAAGTLRHYYLVSTDECHHHTLLYALYRLGHIKGKTLVFVNS
EDTTYKLHNFLAQLGINALVYDSNLPMNVRVDALRRFQTGKVGTLVCTDGTLESLDRMRG
ATDGDEETTTSTPRSNSRGKRKSLAAGGDEGGSALHRGIDFSDVSNVILFDGVTNATTSD
FSRYTHRVGRAGRGNKDGVAITFLTLHQARKVKQQLRDYLGGTFQSFAPFKQLDRHAASR
LQYRVDNVLASITRSSTRRQRVAAVAAELTRSAHLMSHMGDKDSGVLKRILSRSKGDTKC
DQTVVDVPEYMRIKGADSAESYRRRVRAPKKHTTAVAKRSAPKRSRDPLGSLTSSLKRRK
L
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgagtgggtcaccgagtgacgttgtacgcaaggcgtggtcggatatagcgttagatagc
cgattggtggaggctattaagaaactgaagtggaaggcccctaccccagtgcagagcgca
tgtattccgttggcgatgaaggggagagatttggcgattcagtcacagacaggtaccggt
aaaactggggcctttctcattccagtaatacagcgcattattaccgagaatgaacgtgca
tgtggccgccgcaacgcgcaaaaccctgtcgctctaatattgttgccatcggaggaactc
tgcaagcagacggtggaggtcgctaatgcgctgacaagatatgtgaaaccgcgaattata
gtgaatgatttaacctctcgtgtatccaccgcaaatgcgttgcgcctcaccgctgcacca
atacttgttagcaccgctgcctcgctgggcaaactgtgccgcaatggttctgttacctca
gatgacatgaagccgctgcgttgcgttgtgattgacgaggccgacctgatcatgtcgatt
gcggagggctcactacgagcagtgcagtcagtgctaccaacgtctgcgcagacaatcttg
gcttccgccacgttaacggatggtgtcgctcagattaagggccagctacttcataatcca
ataacggtatcacttaagccagatgacggggagaaggaaccgacaggttgtgaagggcca
gtgggggcagaggacgttgtgttggagtcacgtgtgacggttcgcggtggtgcagcagcc
gctggtacgttgcgccattactacttggtgtcaactgatgagtgccatcatcacaccctg
ttgtatgcactttaccgtctagggcacattaagggtaagacccttgtcttcgtgaactct
gaggatacaacatacaagttgcataatttccttgcgcagttgggcatcaacgctctcgta
tatgacagcaacttaccgatgaatgttcgtgtggatgcgcttcgccgctttcaaactggg
aaggttggcacacttgtttgtacagatgggacgcttgaaagcttggaccgcatgcggggt
gcaactgacggtgatgaggagacgactacctctactccaaggtctaattcacggggaaag
aggaagtctctcgctgcgggtggtgatgagggtggtagtgcattgcatcgtggtattgat
ttctctgatgtgagcaatgttattctctttgatggtgttaccaatgccacaacctcggac
ttctcccgttacacgcaccgtgtggggcgtgctgggcgcggaaacaaagatggagtggcc
atcacatttttaacccttcatcaagcgaggaaggtgaagcagcaactacgtgactacctg
gggggtacattccaatctttcgctcctttcaagcagctggatcgacatgcggcgtcacga
ttgcagtaccgcgtggacaatgtgttggcatcgatcacccgctcctctactcgccgtcag
cgcgttgcagccgtcgcggcggagcttacgcgtagtgcgcacctcatgagccatatgggt
gataaagacagtggtgtcctcaagcgtattctctcacgctccaagggagatacaaagtgc
gaccaaacagtggtggatgtgccggaatatatgcgtattaaaggagctgactctgcggag
agttaccgtaggcgggtgcgcgcaccaaaaaaacatacgacagcggttgccaaacggtca
gccccaaaaaggtctcgtgacccacttggtagtttgacgagttcgttgaagcggcgcaag
ttgtaa
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