Trypanosoma brucei gambiense: TbgDal_XI5670
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Entry
TbgDal_XI5670 CDS
T06526
Name
(RefSeq) hypothetical protein, conserved
KO
K22377
E3 ubiquitin-protein ligase listerin [EC:
2.3.2.27
]
Organism
tbg
Trypanosoma brucei gambiense
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tbg03009
]
TbgDal_XI5670
04121 Ubiquitin system [BR:
tbg04121
]
TbgDal_XI5670
Enzymes [BR:
tbg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
TbgDal_XI5670
Ribosome biogenesis [BR:
tbg03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
TbgDal_XI5670
Ubiquitin system [BR:
tbg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
TbgDal_XI5670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBC_like
Ltn1_1st
zf-RING_2
HEAT_MROH2B_C
LTN1_E3_ligase_6th
HEAT_GCN1
FANCL_C
Zf_2nd_IFT121
zf-C2H2_AcuF
Motif
Other DBs
NCBI-GeneID:
23867571
NCBI-ProteinID:
XP_011779713
UniProt:
D0A6Z8
LinkDB
All DBs
Position
11:<1420345..>1425465
Genome browser
AA seq
1706 aa
AA seq
DB search
MPPRPAKGRAALSFVASRGIPDSLESFLGDFSQPVKSNTEGSAMMEVNLKLLQKSNETTV
LKALVELNRGASAMSEEELVHYLPQVVEAVVRHAEHSNASVRSGVFALLHEFLLRGSLLQ
QAVTKRLPKLASAWVTRMCDMEPSVRRDASDAFNAAYTTEVLKQHADSIVTDLISNYEEI
IAQSRGKPLQDDTLDRRSNALYSCVCAMGHMLRVGAPASACHKVIEFVEGNSVQPIMPPP
EGVTKGSMVVKAPVVRSASLILLRDILSSKLATLRVHQQVSTALYNAMSDRCAVVLRRAW
ELQLLWFGSDSSSALSHMQGGFLRVVMNSITDCNDPEVAEIIYPSLVPLLVPVTRSSAFA
SAIEEFSEVLQRKILNVSDVVQREWDLVLSSLMRVWELRCVRSAKLGEGHEREGATMFSS
IVATLATALEQPARRGRLLSTTASVVAQTLERVARHTECFSECVQLLCGPTDSFSQRTGG
GANAALVESFDVLQAALIGSSVSLPGVLVGAETLMAKYVEKKQWNILAELLQSMTDAYGS
CVREEHAHSPVGIPSKEIQKLVTNGVLRAVRLSVSAERKDSDGVEPMHPLHRVLSYVLQW
SDDDALSELQQIAATVGPGPFWLKDLLRSHELRDPERLITLFSKACEEADFRTVELCVDS
LLGEQEVNPRPLTSAEKKGLRQAVQESLRKLHLLVSVDNDESEEEAEESSKEGDSGSGYD
GSGAGDSSGDEGSEGAAEADGSGNEGDSNNGTLVQQQLIAWARFLGNGEPFASLLEVSSE
DIDLPMVFRIVASIAPRLHAEQYMSIKALRMALQMEEDPLLVAMSKKIHSIDAKAFNVVV
ESIEQLLNSYGVSVEERDTVSLELFDSVMSDPQSSIAACGRLQHIVPFASCSLIQGIACS
GDVWLEHQVHLRANVAATGTGKVPFALLDQYSPLCGIVPSMLRCVRTSQLIHLLASSVEL
NSASAAVVGRPLLHAARVQEVLAEPTRRLLVTKLLPRVLLSISSPKEVDTLLLRGEEVHK
LLFTLAVVIRDTAVHSSGDAFNSSVRCIVSTITQWIAEAALLHVGDAPTHEEAIRHYRAL
FSTLDEAADIVGDSFLAKVPSGEAASAIQESMCMIPTLHPNTGLLAMTLHRHLSHLPVVR
GDTVRQVIDYARKKKPLDGLEFLAELTSSRIIDTEAYNELVRVFTRLLASSFRLRHMPPN
NCLVSQAPNDAPISLCDTQRAVVAVVSARRGINLHNRVDDTLRSSINLVLFDAVAGSVVS
LKQANEEELSLMTKLIAFTSNCLSDLGSSDVTVLRASEVSVTKVAAVMNYAYQWLCATSI
TRLDSIGMETVTSAIRAIALLSNLTLVRSGFVLLPIMRQITGRRSMKDIREEFSSKSPAK
AIIFRRQAAVIAKTNKQKLTLFPHLLAWCVTLSGPVQERVSKEWREEVFQLLDVLCALLL
SPAVPGSKRVENTYLCNGNGSSGAGEQLGFEIIALTRPNAADPMRELAKGAAAVFALLLQ
SSTLSIVKSWLETVERKLQDYFYTFVEEHLSPCLIRESLLMVLSKNPTGGSTFDVNERYT
VSVCTLRNRITLKYTVEDTDSTVHIEFKPDFPLRPPVVTCEKTRGCGVSADKWHVWMRKM
TVLLFGGSSNVWDCVMLFGRNMDEHFSGKDPCPICFAIVSASSNRLPDMQCAVCRNSAIH
SDCLYSWWATGGRTVCPLCRSPWVAT
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgcgaccagcaaagggacgtgccgcgttgtcatttgttgcatctcgtggtatt
ccagacagcttagagagttttttgggcgatttttcacaacccgtcaagagcaacacagaa
gggtccgctatgatggaggtgaatctgaagttgctgcagaaaagcaatgaaacaaccgtg
ctcaaagctctcgtggagctgaaccggggggcatctgctatgtcggaggaggagttggtg
cattacttgccgcaagtcgtcgaggcggtcgtgcggcacgcggagcactcaaatgcatcg
gttcgctcgggtgtgtttgcgctactgcatgagtttctgttacgcggttcattgctccaa
caagctgtgaccaagcgcttaccgaaacttgcttctgcatgggtaactcgcatgtgtgac
atggagccgtctgtacgcagggatgcatcggatgcatttaacgctgcatacactacggaa
gtacttaagcaacatgcagacagtattgtaaccgatcttattagcaattatgaggaaatc
attgcccagagccgtggaaaaccactgcaggatgacacgttggaccgtcggtcgaacgcc
ctctactcctgcgtatgcgctatggggcacatgttacgtgtgggtgcccctgcctcggca
tgtcataaggtcattgagtttgtagaagggaattcagtgcagccgattatgccgccacct
gagggggttacaaaaggaagtatggttgttaaagctccagttgtaaggtctgcttcactt
atacttctgcgtgacattctttcctcaaagctggcaactttaagagttcatcagcaggtt
tctactgctttatacaacgcgatgtccgaccgttgcgctgtggtactccgtagggcgtgg
gagcttcaactactttggtttggtagtgactcttccagtgcattgtctcacatgcaaggc
ggatttctccgtgtggtgatgaacagtatcacggattgcaacgaccctgaggtggcagag
attatttacccgtcactcgtaccattgcttgtcccagtcactcgttcttcagccttcgcc
agcgcgattgaggaattcagcgaggtgcttcaacgcaagatcctcaatgtcagtgatgtg
gtacagcgggaatgggatttagtgctttcctcactaatgcgtgtgtgggaacttcggtgt
gtccgctcagcgaagctaggggagggacacgaacgcgaaggcgccacgatgttttcttct
atagtagcaacactggccacagctctcgaacaaccagcgcggcggggacggcttctcagc
acaacagcctccgtcgtagcacagacattggagcgtgtagctcgtcatactgagtgcttc
agtgaatgtgtgcaactcttgtgtggccccacggactctttttctcaacggactggtgga
ggggcaaacgctgcactggtggaaagcttcgatgtacttcaggcggcattaattggctct
tctgtgagtttaccgggcgtgcttgtcggggcggaaacgcttatggcaaagtacgtggaa
aagaaacaatggaacattcttgcggaactgttgcagtcaatgacagacgcgtatggaagt
tgtgttcgcgaagagcatgcacattctcccgtgggtatcccttctaaagagattcaaaaa
cttgttacgaacggtgttttacgtgctgtgagactgagcgtatcagcagagcggaaggat
agtgacggggtggaaccgatgcacccccttcatcgggttctctcttacgtcctacagtgg
agtgacgatgatgcacttagtgaactgcaacagatcgctgccaccgtgggaccgggaccg
ttttggttgaaggatttacttcgaagtcacgagttaagggatcctgagcggttgatcact
ttgttttcaaaagcttgtgaggaagctgactttcgcacagtggagctatgtgtggattcg
cttctcggcgaacaggaggttaacccccgcccactgacgagtgccgagaagaaggggctc
aggcaggctgttcaggagtcgttgcggaaactgcacctgctagtgtcggttgacaacgat
gaaagtgaggaagaagcagaggagtcctccaaggaaggtgacagcggatcgggttacgat
ggcagcggggcaggtgacagcagtggtgacgaaggtagcgaaggcgctgcggaggctgac
ggtagtggaaatgaaggcgactcaaataacggcactttggttcaacagcagctcatcgca
tgggcgaggtttctagggaatggcgagcccttcgcttcacttctggaagtcagtagcgag
gacatcgatttaccaatggtattccgcatcgttgcttccatcgctccgcggttgcatgca
gagcaatacatgtctattaaggcacttcgcatggccctgcaaatggaagaggacccactt
ctggtggcgatgtcaaagaaaatacattctatcgatgcgaaggccttcaatgtagtcgtg
gagtctatcgaacaactgctcaactcgtacggcgtctcagtggaagagagagatactgta
tcactggagttgtttgatagtgtcatgagcgacccgcagagtagcatcgcagcgtgtggg
aggctgcagcacattgtgcccttcgcttcttgtagtctgatccaaggaattgcgtgcagc
ggcgacgtctggttggaacaccaagttcacctacgtgcaaatgtggctgccacagggact
ggaaaagtaccgtttgcgttgttggatcagtactctccactatgcggaatcgtaccatca
atgttgcgttgtgtacgaacctctcaactgattcacttgcttgcttcctcggtggaactt
aactcagcgagtgccgctgttgttgggcggcccctgttgcacgccgcccgcgtgcaggag
gtgctggctgagccaacgaggaggctgctcgtgacaaagctgctgccgcgtgtcttactc
tccatctcatcgcccaaagaagtagacacactgctcctacgcggagaggaggtgcacaaa
cttctgtttacgcttgctgtcgtgatccgggataccgcagttcactccagtggtgacgcg
ttcaactctagcgtccggtgcattgtaagcaccattacacagtggattgccgaagccgct
ctcctgcatgtgggcgatgcgccgacacatgaagaagctattcgccattatcgtgcgtta
ttttctacactggatgaagctgctgacattgttggggattcttttctcgctaaagttcct
tctggcgaagctgcttctgctattcaagaatctatgtgcatgatccctacactgcatccc
aatacgggattgctcgcgatgacgcttcacaggcatctaagtcatttaccagttgtgagg
ggtgatactgtccgtcaggttattgactacgccaggaaaaaaaagcctctcgatggcctc
gaattcctggcggaactcacttccagtcgcattattgacacggaagcctacaacgagctt
gtgcgtgtcttcacacgcttgctagcgagttccttcagacttcgccatatgccaccgaat
aattgccttgtttctcaagcaccgaatgatgcacccatttcgttatgcgatactcaacgt
gcagttgtcgccgttgtttcggcaaggcgtggtattaacttgcacaaccgcgttgatgat
acgttacggagctccataaatcttgtgctgttcgacgctgtggcaggatccgtggtttca
cttaagcaggcgaacgaggaggaactgtcactcatgactaaactcattgccttcacctcg
aactgccttagtgatttgggctcgtcggatgtgacggttctgcgggcttcggaggtaagc
gtcacgaaggtggctgcagttatgaattatgcctatcagtggctctgcgccacctctatt
actcggttagacagcattgggatggagactgtgacaagtgctattcgcgctatagcgctg
ctttctaacttaacactggtgcgctctgggttcgttctgcttcccatcatgcggcagata
acaggaagacgctcaatgaaggacattcgggaggagtttagttcaaagtcaccggcaaaa
gcaataatattccggaggcaggcggctgtcattgccaaaacgaacaagcaaaagttaacc
ctctttccgcatttgcttgcgtggtgtgtaacgctcagtggtcctgtgcaggagcgtgta
agcaaagaatggcgagaggaagtttttcaacttcttgacgtcttatgcgcactattgctt
tccccggctgtaccaggaagcaagcgggttgaaaatacatacctttgtaacggtaatggt
agtagtggtgctggtgagcagctgggtttcgaaataattgcgttaacacgtcccaatgca
gcagatcccatgcgtgagttggcgaagggcgccgccgccgtctttgcccttttgttgcag
agcagcacactttccatcgtcaagagttggcttgagactgtggagcgaaaactgcaggac
tatttttatacatttgtagaggagcacttgtcaccatgtctcatacgagagagcctcctc
atggtgttaagcaagaacccaaccgggggctcgaccttcgacgtgaacgaaaggtacacc
gtgtccgtgtgcaccttgaggaatcgcattacacttaaatatacggtggaagatacagat
tcaacggttcatatagaatttaagcctgatttcccgttaaggcccccggtggtcacatgt
gaaaagacacggggctgcggggtatccgcggacaaatggcacgtgtggatgcggaaaatg
actgtattgcttttcggtgggtcatccaatgtatgggactgtgtgatgctcttcggcagg
aatatggacgagcacttttccggtaaagatccttgccccatttgttttgctatcgtttca
gcttcgagtaatcgtcttcccgatatgcagtgtgcagtgtgccgtaactctgcaatacac
tccgattgcctctactcgtggtgggcgaccggggggcgaaccgtgtgcccactttgtcgt
tccccatgggtagcaacctaa
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