Trypanosoma brucei gambiense: TbgDal_XI6370
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Entry
TbgDal_XI6370 CDS
T06526
Name
(RefSeq) replication factor C large subunit, putative
KO
K10754
replication factor C subunit 1
Organism
tbg
Trypanosoma brucei gambiense
Pathway
tbg03030
DNA replication
tbg03410
Base excision repair
tbg03420
Nucleotide excision repair
tbg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TbgDal_XI6370
03410 Base excision repair
TbgDal_XI6370
03420 Nucleotide excision repair
TbgDal_XI6370
03430 Mismatch repair
TbgDal_XI6370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tbg03032
]
TbgDal_XI6370
03400 DNA repair and recombination proteins [BR:
tbg03400
]
TbgDal_XI6370
DNA replication proteins [BR:
tbg03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
TbgDal_XI6370
DNA repair and recombination proteins [BR:
tbg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
TbgDal_XI6370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA
Rad17
RuvB_N
AAA_22
AAA_14
RNA_helicase
AAA_5
AAA_16
AAA_assoc_2
ABC_tran
AAA_6
AAA_30
AAA_19
NPHP3_N
NTPase_1
RCF1-5-like_lid
AAA_28
AAA_18
nSTAND3
AraA_central
AAA_17
AAA_11
Motif
Other DBs
NCBI-GeneID:
23867649
NCBI-ProteinID:
XP_011779783
UniProt:
D0A768
LinkDB
All DBs
Position
11:1585697..1587460
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AA seq
587 aa
AA seq
DB search
MMTSSPSSIEVPHSWAEKYKPKTIAQMCYPVTANKLKQWMEEFEANSSKMRGALLSGPPG
VGKTTSVYVVASELGRVVVEYNASDFRSRKSLRENVSTVVNNRTFSNTSSSYANIVLLMD
EVDGCDIGGVGEVIQMIKNTNVPIICTCNDRWHPKLRSLLNHVEDIRAGRPPCNIVANYL
CDKVLAREGISLSKQLLQDIIQRSGSDIRSMLNNLQMWCINQTSLQQKKLAECALQSAKD
GDVGLFEAAEVFLLQGSSRGRPRSIEELQSTFYNSDLVDMFVQENYLHFKPEDRDWMDAV
AEAASSISLSDLAQRIMFFENNWSVSRSHVLLSSIIPCALTRGHYETFVTGQQAIFDRQR
PVKFPSWLGQNSAAGKNKRLLRCLTFQAMGHSKGISGTQEDVLLDYIPRAWESRLTDPLA
QRGKDAIPEVIAFMDQYHIMRDDWEFIQSVAHFKKMQSASPNPAAGDIPGGIKAAFTREF
NKTHRLESFAKGALQRVATDGIGFGEGEEDNEEEGSVAGASRPTAKKASAKTAAKPKKAA
KKEGNENAKPKKAAAKTAKPAGRRGRKATLVDSDSEPEFESYSSDDY
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccagcagtccgagttccattgaagtgccccactcgtgggcggagaagtacaaa
ccaaaaaccattgcacagatgtgttaccccgttaccgcaaataagttgaagcaatggatg
gaagaatttgaagccaatagttccaaaatgaggggagcactactctcgggaccacctggt
gttggtaagacgacatctgtttatgttgtggcttccgagctcgggcgtgttgttgttgaa
tacaacgccagcgacttccgcagcagaaaatcactgcgggagaatgttagcaccgtagtt
aataaccgcactttcagcaacacttcctcctcctacgctaatattgtgctgctgatggac
gaagtggatgggtgcgacattggcggtgtcggagaagttattcaaatgatcaagaacacc
aacgtgccaatcatctgcacgtgcaacgaccggtggcatccaaaattgcgctcactgctg
aaccacgtggaagacatccgcgctggtcgacccccgtgtaacatagttgccaactacctt
tgtgataaggtactggctcgcgaaggcatctctctttctaaacagcttctgcaggacatc
atacagcgatcgggaagcgacatccgcagcatgctcaacaatctgcaaatgtggtgcatc
aaccaaacatcacttcagcagaagaaacttgcggagtgcgcactgcagtcagcaaaagat
ggtgatgttggcctatttgaagccgccgaggtatttcttctgcaggggtcgtcgcgtggt
aggccccgttccattgaagagctccagtccacgttctacaactcggaccttgtggacatg
ttcgtgcaggaaaactaccttcacttcaaacctgaggaccgtgattggatggatgcagtt
gccgaggcagcgtcttcaatttcactctcggatctagcgcaacgtattatgttctttgag
aacaactggtccgtatcccgctcccacgtacttctctccagtattataccgtgtgcccta
acccgtggtcattacgaaacttttgtgacggggcagcaggccatatttgatcgacaacgc
cctgtgaagtttccttcatggcttggtcaaaattcagctgctggtaaaaacaaaaggctg
cttcggtgcttgacatttcaggcgatgggtcactcgaagggtattagcggtacacaagag
gatgttctgcttgattacataccacgtgcctgggagagcagacttaccgacccattagca
caacgggggaaggatgccattccggaagtaattgctttcatggatcagtaccacatcatg
cgtgatgactgggaatttatccagtctgttgcacactttaagaaaatgcagtcggcgtct
ccaaaccctgctgcaggagatattccaggaggtataaaagcagccttcacgcgagagttc
aacaagacacatcgtttggaaagctttgcgaagggggcgctgcaacgggttgccaccgat
ggaatagggtttggagagggggaagaagacaacgaggaagaaggaagtgttgcgggagcc
tcacgccccactgcgaagaaagcttccgcgaaaactgccgcgaagccgaagaaggcggcg
aaaaaggaaggtaacgagaatgcaaaaccgaagaaagccgcggccaagacggcgaaacct
gcgggtaggcgggggaggaaagccactcttgtcgactctgattcggaaccggagtttgag
agctacagttccgatgactattag
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