Trypanosoma brucei gambiense: TbgDal_XI7820
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Entry
TbgDal_XI7820 CDS
T06526
Name
(RefSeq) DNA repair and recombination helicase protein PIF1, putative
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
tbg
Trypanosoma brucei gambiense
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tbg03032
]
TbgDal_XI7820
03029 Mitochondrial biogenesis [BR:
tbg03029
]
TbgDal_XI7820
Enzymes [BR:
tbg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
TbgDal_XI7820
DNA replication proteins [BR:
tbg03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
TbgDal_XI7820
Mitochondrial biogenesis [BR:
tbg03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
TbgDal_XI7820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_30
AAA_19
Pif1_2B_dom
Viral_helicase1
AAA_22
UvrD_C_2
AAA_5
AAA_16
AAA_24
Motif
Other DBs
NCBI-GeneID:
23867809
NCBI-ProteinID:
XP_011779927
UniProt:
D0A7L2
LinkDB
All DBs
Position
11:complement(1933202..1936348)
Genome browser
AA seq
1048 aa
AA seq
DB search
MSSKTVVWSSLGRFMRTSHHRLLDEKLFPASHNRHVQSRLLSTPLSLIAVPSWMSKCRTS
AVRLSRHPPQVSGQEPCAVTASSSVGTWHGSSPAGLRRCQHVRSLNGWTTPGDVPIRHGS
RSIATIATGCGGVGAGGINSSVDVAEVSGVSTSGVAAAPTVALPPGPPVEKPPLICVVRR
ATRGGAAADSVGTGTPGKCDKPPDSSSTLVGTIARVLSSSGECGRHSSANQEGFSLGSRP
ARKILVKLEADTVAAPLADTKEKKIYVQQQPVVVAQSPLARSSSTVTWEEGDTLVYNIFT
QRVVKSSSASIRALSVLGVGVRSSEKELSVVDPHALVEFRDKLREKEVSWPSAWRSSLFN
QLQHVLLKDQPMEEMISRVHELLQLHYQRVKRSCVANVTKGEPDTKTEEANPAGDEVAIN
GEMTYHERLLGYPDLNEEQRRVVDFVLRGYNTYIGGGAGTGKSLLLRVIRQELVSRGLTV
ATTATTGIAARRLNGTTLHHCFGVNVYGEFTRRAELKEFDVIIIDEVSMLSKELFESLEF
QLRRANGVDLPFGGVQVILSGDFLQLGAICSVSLVHSSVFRRNFAMLKLQRVVRQEGSSI
FAQQLQELRRGTVPHDLQDTVQFLSPPETAKWLEGEGKGAVKLLPTNKEVDEVNQAELDK
LPSDLVVYPAQMQAPSLVGRWTATYILEAVVKDTKVIDTHKLTRALEQYVLDFLQKTPYA
SDYTLPVVGQRYIVLYKLFADAFAFRVRIPQDMSEKDMRDLALHLRGLETWLPACGLGVF
LREILDSPDGLHTDADDYTLTRYAELHPMASPLRLKKGAKVMLRTNLAPGLVNGSLGVVV
GFKELSAKHLPRFVNTPGRIAAVENYAEYLRYEHGFTTAFAPEVDFGGGRVIVVPPVLFS
VGGLSNTNHYHVGIVSLPLSLAYAFTVHKVQGLTLAGRVHLELSRMWPCDHLLYVAMSRV
RNPEQLTVSSFHNSLVRCASECLLFDDSLPPVEQVRVLPHFFQASWQRTPSRRKAALQRK
REQAKQSKQKKAAKLKEAMIKQAKEATP
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaaagacggtagtttggagcagtttagggcggttcatgcgcacctcccaccat
aggcttctcgacgaaaaattgttcccagcttcccacaaccgccacgtccagtcgcgattg
ttgtctaccccattatcactgattgcggtaccgtcgtggatgtcaaagtgtcgcacctca
gccgttcggctctcacgtcaccctcctcaggtttcggggcaagagccttgcgccgttacc
gcatcatcaagcgtgggaacgtggcatggctccagccctgctggacttcgtcggtgccaa
catgtacgatcattaaacggctggacaacgcctggtgatgtgcccatacggcatggaagc
agaagtatcgcaaccattgccactggatgcggtggtgttggtgctggtgggattaatagc
tcagtcgatgttgctgaggttagtggtgttagtacatccggagttgcagctgctcctacg
gtagcgcttccgcctggacctcctgtggagaaaccgccgctcatttgtgtcgttaggcga
gccacacgcggtggtgctgctgctgactcggttgggacgggaactcctggaaaatgtgat
aaacctcccgactcttccagcacgttggttggtacaatagcccgggtgctgagtagtagt
ggggaatgtggacgccacagcagtgcaaaccaagagggattttctcttggatcacggccg
gctaggaaaatattagttaaactggaggctgatacggtcgcagcccctcttgccgatact
aaggaaaagaagatatatgttcagcaacaaccggtggttgtggcacaatcacctttagcg
agaagcagtagcaccgttacttgggaagaaggggacacgcttgtgtacaatatttttact
cagcgggtagtgaaaagctcgtcggccagtatccgtgcgctctctgtacttggtgtagga
gttcgttcaagtgagaaggagctttccgtagttgatccgcatgcactggtggagtttcgt
gataaactccgtgagaaagaggttagttggccatctgcgtggcgtagttccctttttaac
caattacaacacgtactgctaaaagaccagcctatggaagagatgatatcccgagttcat
gagctgctacagctgcactaccagcgtgtgaagcgttcgtgcgtggcaaacgttactaag
ggagaacccgacacgaaaacggaagaggcgaacccggctggcgatgaggttgctataaac
ggtgaaatgacataccatgaacggttgcttggctaccctgacttaaacgaagaacagagg
cgtgtagtagactttgtgcttcgcggctacaacacgtatattggtggaggggcagggact
ggaaagtctcttcttctgcgggtaataaggcaagaacttgtcagccggggccttacggta
gcaaccacagcgacaacaggcatagcagcaaggcgtttgaatgggacaacgctacatcac
tgcttcggtgtgaatgtgtatggtgagtttacacggcgagcggagttgaaggagttcgat
gtgattatcatagatgaggtttccatgctatcaaaggagctatttgagtcacttgaattc
cagctccgccgggcgaacggtgtggatttacctttcggtggcgtgcaagttatcttgtct
ggtgatttcctccaactgggtgcgatctgttccgtatcgcttgtccactcgtcagtgttc
cgccgtaattttgcaatgctcaagctccagcgggttgtgcggcaggaagggagtagtatt
ttcgcccagcagttacaggaattacgacggggtacagtgccgcatgatctgcaagacacg
gttcaattcctatccccaccagaaacagcgaaatggttagagggtgagggaaagggcgcg
gtgaagttgctccccacgaacaaggaagtggatgaggtgaatcaagcagagctggacaag
cttcccagtgatcttgtcgtatatcccgcacaaatgcaagctccatcactggttggacgg
tggactgcaacatatatactggaggctgtggtgaaagacacgaaagtgatagatacgcat
aagttaacgagggcgctagagcagtatgtgcttgatttccttcagaaaacaccttatgcc
agtgattatacgctaccggttgtaggtcagcggtacattgtgctgtacaaactgtttgct
gatgccttcgcatttcgagttcgtataccacaagacatgagtgagaaggacatgcgggac
cttgcgctgcatctgcgtggtttggaaacatggcttccggcgtgtgggcttggggttttc
ttgagagaaatccttgactcacctgacggactgcataccgatgcagacgattacacgcta
acgcgatatgcagagcttcaccccatggcgtctccgctacgcctcaagaagggtgccaaa
gtgatgttgcgtacaaacctcgccccaggtctcgtgaatggtagtcttggtgtagttgtc
gggttcaaagaacttagtgcaaagcaccttccgcgatttgtgaacacaccaggaaggata
gccgcagttgaaaattacgccgagtacctacggtacgagcacggcttcaccactgcgttt
gcacccgaggtagatttcggaggggggcgcgtgattgttgtcccacccgttcttttctca
gttggagggctgtcaaacacgaaccactaccatgtaggcatcgtatccctgccccttagt
ttagcatatgccttcaccgtccataaggtgcagggactaacgcttgccggtcgtgtccat
ctcgaactgtcccgcatgtggccctgtgatcatttgttatacgtcgccatgagtcgtgta
cgcaacccagagcaactgacggtgtcatcgtttcacaacagtctcgtgcgatgtgcgtct
gaatgtctcctcttcgatgactcgttgcctccggttgaacaagtgcgggttttgccacac
ttcttccaggcaagctggcagcgcacacccagtagacgtaaggcggcactccagcggaaa
agggagcaggcaaagcaatccaagcaaaagaaggctgcgaaactgaaagaagcaatgata
aagcaagcgaaggaagcaacaccgtaa
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