Tepidiforma bonchosmolovskayae: Tbon_00570 Help Entry Tbon_00570        CDS       T06308                                  Name (GenBank) DEAD/DEAH box helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism tbh  Tepidiforma bonchosmolovskayae Brite KEGG Orthology (KO) [BR:tbh00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:tbh03400]     Tbon_00570 Enzymes [BR:tbh01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      Tbon_00570     5.6.2.6  RNA 3'-5' helicase      Tbon_00570 DNA repair and recombination proteins [BR:tbh03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     Tbon_00570 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc WH_Lhr WH4_Lhr DEAD WH3_Lhr WH2_Lhr Helicase_C ResIII AAA_25 DUF6406 Motif Other DBs NCBI-ProteinID:  QFG01865 LinkDB All DBs Position complement(105967..110418) Genome browser AA seq 1483 aa AA seqDB search MATPPAAEPLAVFSPATRAWFTSAFAAPTRAQELGWQAIATGEHTLLLAPTGSGKTLAAF LACLDRLVQREPLPRGRDGRPVRPGVSVIYVSPLRALSYDIERNLRAPLAGLRLAALRDG RPDPEIDVAVRTGDTPARERDDLRRHPPDILITTPESLYLMLTSAAREVLATAETVIIDE IHTMAATKRGAHLALTLERLERLTGREFQRIGLSATQRPLDEVARFLGGDRPVRIVDAGS RRALDLQVVVPLEDLSRPAEFAGPVPESELSPEQRSSVWPAFYQEILDQVRAHRSTLIFV NNRRLAERIAARVNELAGAELLRAHHGSVAREQRLAIEEELKAGRLPGIVCTSSMELGID MGAVDLVIQVESPKSVASGLQRVGRAGHQVDGISRGRFLPKHRGDLLECAVVTRRMREGL IEETRVPKNPLDVLAQQIVAACAVEEFSVEELLGMVRRAYPFASLSREQLEGVLAMLAGQ YPSDEFAELRPRITWDRETGTISARRDARTLAIVNAGTIPDRGLYGVFLGDGGPRVGELD EEMVYESRPGETFVLGATTWRIEQITRDRVIVSPAPGQPGKMPFWRGDGIGRSAELGEAV GAFTRHLERFRSPDEAVGWLTAETDLDERAARNLVAYLAEEREATGCLPTDRRIVIERYL DELGDWRVVILSPYGGRVHAPWAMTIEARLAEAGFPESQVIWGDDGIAIRLGGGEEVPPL DVFFPAPEELEDLLVSHLGSTALFAARFRENAARALLLPRRRPGSRSPLWLQRLRAANLL AVASRYGSFPIILETYRECLQDVFDLPALHRLLQRVQAREVEVREVAVRDASPFARSLVF EYVAAFMYEGDAPLAERRAQALTLDRSLLRDLLGEADLRDLLDARLIDEVELELQGLAAA RKPADADALHDLLRRLGDLTVDEVAARIAEPGLGEALLAALARSGRACAVRIAGEERWIP AEDAARYRDAVGVALPQGVPGAFAPPAEGALASLLARYARTHGPFHAGQPASRWNLPIAL VADTLRQLEREGRMVAGTFRPGSAGTEWCDVGVLRTIERRAVASLRKEVEPVDGATYTRF LLSWHGLIRPRRGLDALRDAVAQLEGYPLPASMLERVILPARVEDYTPAMLDALCATGEV AWFGAGRLRAEDGRVVLAARERLAAFVPPAPELPEEPLAGRILDLLRERGALFFTDIVAA TGAPLRDVLGVLWDLVWGGFITNDTLAPLRAWARRGRDGAAPGGRLRSLPPEAAGRWSVL PPALDRTRALHAWASAVLERRGVAAREAVNAEAVRGGFSALYPVFREMEERGRVRRGYFV EGVGGAQFALPGTVDRLRAEREPADRLQSVIVAAVDPAQPYGELLPWPAAGDAAVRGPAR TAGNFAILVDGRPVLALERWGKSLLQLPADDPDGEERLAVALDCLCRAAPWLAPRGLTIE RIDGEPAAESPLAEHLARRGFAAGYRGLTLRTASPGTMAYARG NT seq 4452 nt NT seq  +upstreamnt  +downstreamnt atggccacgccgcctgcggccgagcccctcgcggtgttcagcccggccacccgggcctgg ttcacctcggcctttgccgcgccgacccgcgcacaggagcttggctggcaggcaatcgcg accggcgagcatacgctcctgctcgcgccgaccggctcggggaagacgctcgctgcgttt cttgcctgcctcgaccgcctcgtccagcgcgaacccctcccgcgcggccgcgacgggcgc ccggtgcgccccggcgtgagcgtcatctacgtctcgccgctccgggcgctttcctacgat atcgagcggaacctccgcgcgccgctcgccggcctgcgcctcgcagccctgcgcgatgga cggcccgaccccgaaatcgacgtcgcagtgcgcaccggcgacacccctgcccgtgaacgg gacgacctccgccgccatccgcccgacatcctgatcacgacgcccgaatcgctctacctg atgctcacctcggccgcccgcgaggtcctcgcaacggcggaaacggtcatcatcgacgaa atccacacgatggccgccacgaagcgcggggcgcaccttgcgctgaccctcgagcgcctc gaacggctcaccgggcgggagttccagcgcatcggcctctcggcgacacagcgcccgctc gacgaagtcgcccgattcctcggcggcgaccgcccggtccgcatcgtcgacgccggcagc cgccgcgcgctcgacctccaggtcgtggttccgctcgaggacctgagcagaccggccgaa ttcgccggcccggtccccgagagcgaactctccccggagcagcggagctcagtctggccc gccttttaccaggagattctcgaccaggtccgggcgcaccggtcgaccctcattttcgtg aacaaccgccgcctggcagagcgcatcgcggcccgcgttaacgaactcgccggggcagag ctcctccgcgcgcaccacggctccgtcgcgcgcgaacagcggctggccatcgaagaggag ctgaaggccggccgcctgccgggcatcgtctgcacgagctcgatggagcttggcatcgat atgggcgcggtcgacctcgtcatccaggtcgagtcgccgaaatctgtcgccagcggcctc cagcgcgtggggcgggcaggccaccaggtggacggcatcagccggggcaggttcctgccg aaacaccgcggcgacctcctcgaatgcgcggtggtgacccggcgcatgcgcgaaggcctg atcgaggaaactcgggtcccgaagaatccgctcgatgtcctcgcccagcagattgtcgcg gcctgcgcggtcgaggagttcagcgtcgaagagctgctcgggatggtccgccgggcgtac cccttcgcctcgctcagccgagagcagctcgaaggcgtgctcgcgatgctggccggccag tacccgtcggatgagttcgccgagcttcgcccgcgcatcacctgggaccgcgagaccggc accatcagcgcccggcgcgacgcccggacccttgccatcgtcaacgcagggaccatccca gaccgcggcctgtacggggtgttcctcggagatggcgggccgcgggtcggcgaactcgac gaagagatggtctacgaaagccgcccgggcgaaacgttcgtcctcggcgcaaccacctgg cggattgaacagattacccgcgaccgcgtgatcgtctcgccggctcctgggcagcccggc aagatgccgttctggcggggcgacggtatcggtcgatcagctgagctcggcgaggccgta ggcgcttttacgcgtcatctcgaacggtttcgcagcccggacgaggctgttggctggctg accgccgagactgacctcgatgagcgcgccgcgcgcaacctcgtcgcgtatctcgctgag gagcgagaggccaccggctgcctcccgaccgaccgccgcattgtgatcgaacggtacctc gatgaactcggcgactggcgggtcgtcatcctctcgccgtacgggggccgcgtccacgcg ccgtgggcgatgaccatcgaggccaggctcgcggaggccggcttcccggagtcgcaggtc atctggggtgacgatggcatcgccatccggctcggcggcggcgaggaagtgccgccgctc gacgtgttcttccctgcccccgaagaactcgaagacctcctcgtctcgcacctcggttcg accgcgctgttcgctgcccgctttcgcgagaacgccgcccgggcgctcctgctcccgcgc cgcaggcccggctcgcgctcgccgctctggctccagcggctccgcgcagccaacctcctt gcggttgccagccggtacggctccttccccatcatcctcgagacctaccgcgagtgcctc caggatgtcttcgatcttcccgcgcttcatcggctgctccagcgagtccaggcgcgcgag gtcgaggtgcgcgaggtcgccgtccgcgatgcgtccccgttcgcccgctcgcttgtcttc gagtatgtcgccgccttcatgtacgagggcgatgccccgctcgccgagcggcgggcgcag gcactgacactcgaccggtcgctcctccgcgacctcctcggcgaggccgacctgcgcgac ctcctcgacgcgcgcctcatcgatgaggtcgaactcgagctccagggcctggcggcggcc cggaaaccggccgatgccgacgccctccacgacctccttcgccgcctcggtgaccttacg gtggacgaggtcgcggcccgcatcgccgagcccgggctcggcgaggcgctgcttgccgct ctcgcgcgctccggccgggcctgcgccgtccgcatcgccggcgaggagcgctggattcct gctgaggacgcggcccgctaccgggatgccgtcggggttgcgctgccgcagggcgtgccg ggggcgttcgcgcccccggccgagggcgcactggcgtcgctgctggcgcggtacgcccgc acccacggaccctttcacgccgggcagcccgcctcccgctggaatctgcccatcgcgctc gttgccgatacccttcggcagctcgaacgggagggccgcatggtcgccgggacgttcagg ccgggaagcgccgggacggaatggtgtgacgtcggggtgctccgcaccatcgagcgccgg gcagttgccagcctcaggaaagaggtggagccggtcgacggcgcgacctacacccgcttc ctccttagctggcacgggctcatccggccgcgccgcggccttgacgcgttgcgcgacgcc gttgcccagctcgaggggtatccgctccccgcctcgatgctcgaacgggtcatcctgccc gcccgcgttgaggactacacgccggccatgctcgacgcgctctgcgctaccggcgaggtt gcctggtttggggcgggccggctccgggctgaggatggccgggtggtgctcgcggcccgg gagcgcctcgcggccttcgttccgccggcgccagaactcccggaggagccgcttgccggc cgcatcctcgacctcctgcgggaacgcggcgccctcttcttcacggacatcgtcgccgcg accggcgccccgctgcgggacgtcctcggcgtgctctgggacctcgtctggggcgggttc atcaccaacgacacgctcgctccgctccgcgcgtgggcccggcgcggcagggatggcgca gcccccggcggccgcctgcgcagccttcccccggaggccgccggccggtggtccgtcctt ccgcccgcgctcgaccggacccgggcgctgcacgcctgggcctccgccgtgctcgaacgc cgtggtgttgcggcccgcgaggcggtaaacgctgaggcagtccgcggcgggttctcggcg ctctacccggtcttccgcgagatggaagagcgcggccgggtccggcgggggtactttgtc gagggcgtcggcggcgcccagttcgcgctgcccggcaccgtggaccgcctccgtgccgag cgggagcccgcggaccggctgcagtccgtcatcgttgccgcagtcgacccggcccagccc tacggagagctgctgccgtggcccgctgctggcgatgccgccgtccgcggacctgcccgc actgccgggaacttcgcaatccttgtcgacggccggccggtgctcgctctcgaacggtgg ggaaagtcgctcctgcagctgccggctgatgaccccgacggcgaggagcggttggctgtc gcactcgactgtctctgccgggccgccccatggctcgccccgcgcggcctaaccatagaa cgtatcgacggggagcccgccgccgaatccccgctcgcggagcacctcgcccggcgcggc tttgcagcaggttaccggggcctcacgctccgcaccgcttccccggggaccatggcctat gcccgagggtga

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