Tepidiforma bonchosmolovskayae: Tbon_01080
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Entry
Tbon_01080 CDS
T06308
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tbh
Tepidiforma bonchosmolovskayae
Pathway
tbh03420
Nucleotide excision repair
tbh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tbh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Tbon_01080
03430 Mismatch repair
Tbon_01080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tbh03400
]
Tbon_01080
Enzymes [BR:
tbh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Tbon_01080
DNA repair and recombination proteins [BR:
tbh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Tbon_01080
MMR (mismatch excision repair)
Other MMR factors
Tbon_01080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
AAA_22
AAA_11
DUF3715
Motif
Other DBs
NCBI-ProteinID:
QFG01953
LinkDB
All DBs
Position
206608..208779
Genome browser
AA seq
723 aa
AA seq
DB search
MSAPTGTADILAGLNDAQRAAVTHGDGALLILAGPGSGKTRVITHRIGWLIRERRIAPWR
ILAVTFTNKAAREMRERAARLIGEDAEAVHMGTFHAMCARWLRIDGEAVGVPREFAIYDD
SDQLGVVKRVLEELRIDPRQFAPRGILSRISAAKSEMLTPEVLLGRVRTYQEEVAARVYE
RYDAALRRAGALDFDDLLLRAVELLRVPAMREKWAGRYEHVLVDEFQDTNPAQYVLAREL
ASVHRNITVVGDPDQGIYSWRSADIRNVEHFRRDFPEATVVLLEQNYRSTAPILRAAEAV
IARNPGRHPRRLWTERTGGEPIVTYEAYNDEEEGEFVAREVGRLVAAGRSYRDIAVLYRT
NAQSRPFEEALVRHRIPYRLVGGVRFYERREIRELLAYFRVIHNPADEASLGRIINVPGR
GIGERTVDRLRELAAAQGTSLWEACRSAADGRAEGIGSRAAAALRGFVATMEELREHRDE
PLGRLFERLINAVGYVRYLEEGDDAEERMENVLELQALLAEYEETAGEGNDLATFLQDVA
LVTDQDTLDGRGQGVTLITLHAAKGLEFPVVFLVGMEEGLLPHIRSFDDPQQMAEERRLC
YVGMTRAMDLLYLTRAYRRMTFGASAANPPSRFLADVPAEIRRPYGNTTRGYVEAAAALV
DTDDLEPAETPVFPVGTRVVHPKFGEGVVTDARANGSDTEYVVEFNTAGTRRLLQSYAKL
RAL
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgcaccgaccgggacggccgatatcctcgcggggctgaacgacgcgcagcgcgcc
gccgtgacgcacggggatggggcgctgctgatcctggccggaccggggagcggcaagaca
cgggtcatcacccaccggatcggctggctcatccgggagcggcgcattgccccgtggcgc
attctcgcggtgacgtttacgaacaaggccgcccgcgaaatgcgcgaacgggccgcgcgc
ctcatcggcgaggacgcggaggcggtccacatgggcaccttccacgcgatgtgcgcccgg
tggctgcgcatcgacggcgaagcggtaggagtgccgcgcgagttcgccatttatgacgac
tcggaccagctcggcgtggtgaagcgggtgctcgaagagctgcgcatcgacccccggcag
ttcgcgccgcggggcatcctgtcgcggatttcggcggcgaagagcgagatgctgacgccg
gaggtcctcctcgggcgggtccggacctaccaggaggaggtggcggcccgcgtctacgaa
cggtacgatgccgcgcttcggcgggcaggagcgctggacttcgacgacctgctcctgcgg
gcggtcgaattgctgcgcgtaccggcgatgcgggaaaagtgggccggccgctacgagcat
gtgctggtcgacgagttccaggacaccaacccggcgcagtatgtgctggcgcgcgagctg
gcgtcggtgcaccggaacattaccgtggtgggcgaccctgaccaggggatctactcctgg
cgcagcgcggatatccggaacgtcgagcacttccgccgggacttccccgaggcgacggtg
gtgctcctggagcaaaactaccggtcaaccgcgcccatcctccgggctgcggaagccgtc
attgcgcgcaatcccggacggcatcctcgccggctctggaccgagcggaccggcggcgag
ccgatcgtgacctacgaggcgtacaacgacgaggaggagggcgagttcgtcgcgcgggag
gtcggcaggctcgtcgcggccgggcggagctaccgggacattgccgtgctctaccggacg
aacgcgcaatcgcgccccttcgaagaggcgcttgtccggcaccggattccgtaccggctg
gttggcggcgtgcggttctacgagcgacgggagatccgcgaactgctcgcgtacttccgg
gttattcacaaccccgcggatgaggcgagccttggcaggatcatcaacgtgcccggccgc
ggcatcggcgaacgcacggtcgaccggctccgcgagctggccgctgcgcagggcacgagc
ctgtgggaggcatgccgctcggcagccgacggccgggccgagggcatcgggagccgcgcc
gcagcggccctgcgcgggttcgtcgccaccatggaggagctcagggagcaccgggacgag
ccgctgggccggctgttcgagcggctgatcaacgccgtcgggtacgtgcgttacctcgag
gagggagatgacgcggaggagcggatggagaacgtgctcgaactgcaggcgttgctggcg
gagtacgaggaaacggccggtgaggggaacgaccttgcgaccttcctgcaggacgtggcg
ctggtgacggaccaggacaccctcgacggccgcggccagggcgtgacgctgatcaccctg
cacgcggcaaaggggctcgagttcccggtggtgttcctggtcgggatggaggaggggctg
ctcccgcacatccggtcgttcgatgacccgcagcagatggcagaggagcgccggctctgt
tatgtcgggatgacccgcgcgatggacctgctctacctgacgcgggcctaccgccggatg
acgttcggcgcgagcgcggcgaatcccccgtcgcgtttcctggcggacgtaccggccgag
atccggcgcccctacgggaacaccacccgcgggtacgttgaggccgctgcggcgctcgtc
gacaccgacgacctcgagcccgcggagacgccggtgttcccggtcggcacgcgggtggtc
cacccgaagttcggagaaggcgtggtgaccgacgcgcgggccaacggcagcgacaccgag
tacgtcgtcgagttcaataccgccgggacacgccggctgctccagagctatgcgaagttg
agggcgctgtga
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