Tepidiforma bonchosmolovskayae: Tbon_01275
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Entry
Tbon_01275 CDS
T06308
Name
(GenBank) class I SAM-dependent RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
tbh
Tepidiforma bonchosmolovskayae
Brite
KEGG Orthology (KO) [BR:
tbh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tbh03009
]
Tbon_01275
Enzymes [BR:
tbh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Tbon_01275
Ribosome biogenesis [BR:
tbh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Tbon_01275
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
TRAM
Methyltransf_15
TRM5-TYW2_MTfase
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
QFG01992
LinkDB
All DBs
Position
complement(252563..253771)
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AA seq
402 aa
AA seq
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MPRRGHRWKTPPEPTTLTLRAESLVFGGAALARAPDGRVVFTWFAAPGELVAAVVEREYP
DYLEAVTTRVIAPSPDRVEPRCPLFGECGGCQLQHMAYPAQLRAKEAVVREQLQRIGGLD
DDVVRPIVGAREPWGYRNHVRFSTGKKFGDVGFISRRGHGLLKVEHCPIADPWVNEILPQ
LQGHGAGLHQIQVRHSAATGSFLVNPAVPGVPFPTGQTSYLERLAGHDFVVSASAFFQVN
TAQAEEMVRLVGEALPSRGRLLVDAFAGVGTFARIFADRFDSVIAIEESNSAARDAKVNL
GPVKNARIRIGKVEDILPAFEDHPDAIVLDPPRPGCAPPVLAAITAFRPRVVVYVSCNPA
TLARDLRVLVDGGYRLTDVTPLDMFPQTGHIECVSRLEWPAA
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgccgcggtcaccgttggaagacaccgccggagccgaccacgctcacgttgcgt
gccgaaagcctcgtcttcggcggcgctgccctcgcccgcgcgcccgatggccgggtcgtc
ttcacctggtttgcagccccgggcgaactcgtcgcagccgtcgtcgaacgcgagtacccc
gattacctcgaggccgtcaccacccgcgttatcgcgccctcgcccgaccgggtcgaaccc
cgctgcccgctcttcggcgaatgcggcggctgccagctccagcacatggcctaccccgcc
cagctccgcgcgaaggaggccgtcgtccgggaacagcttcagcgcatcggcggcctcgac
gacgacgtcgtgcgccccatcgtcggcgcgcgggaaccctggggataccgcaaccacgtc
cgcttctcgaccggcaagaaattcggcgatgtcgggttcatctcccgccgcggtcacggc
ctcctgaaggtcgagcactgcccaatcgccgacccctgggtcaacgaaatcctcccccag
ctccagggacacggcgctggtctgcatcaaatccaggtccgccactcggcagccaccggc
tcgttcctggtcaaccccgcggtcccgggcgtcccgttccccaccggtcaaaccagctat
cttgagcggctcgccggtcacgacttcgtcgtcagcgcctcggcgtttttccaggtcaac
accgcccaggccgaagagatggtccgcctggtcggcgaggcccttccctcccggggccgc
ctgctggtggatgcgttcgccggcgtcggcacctttgcgcgtatcttcgctgaccgcttc
gactcggtgatcgccatcgaggagtcgaacagcgccgcccgcgacgcgaaggtgaatctc
ggccccgtgaagaacgcccgcatccgcatcggcaaggtcgaggacatcctcccggcgttc
gaggaccaccccgacgccatcgtcctcgacccgccccggccggggtgcgccccgccggtc
cttgcagcgatcactgccttccggccgcgcgttgtcgtctatgtctcgtgcaacccggcc
accctcgcccgcgacctccgtgtcctcgtcgatggcggctaccgcctgaccgacgttacc
ccgctcgacatgttcccccagaccggccacatcgaatgcgtcagccggctggagtggccc
gccgcatga
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