Tepidiforma bonchosmolovskayae: Tbon_04180
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Entry
Tbon_04180 CDS
T06308
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
tbh
Tepidiforma bonchosmolovskayae
Pathway
tbh02020
Two-component system
tbh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tbh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Tbon_04180
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Tbon_04180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tbh03021
]
Tbon_04180
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
tbh02035
]
Tbon_04180
Transcription machinery [BR:
tbh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Tbon_04180
Bacterial motility proteins [BR:
tbh02035
]
Flagellar system
Flagellar assembly proteins
Stator
Tbon_04180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
GerE
UPF0122
MarR_2
HTH_28
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
QFG02522
UniProt:
A0A5J6SZP9
LinkDB
All DBs
Position
complement(813140..813883)
Genome browser
AA seq
247 aa
AA seq
DB search
MATARASSAPLFEDREAAIRQYAPLVKYVVGRLAIGLPAILDYEDILSYGTIGLIEALDR
FDGSKGVKFETYAISRIRGAIIDALRSLDRLPRSVRQKARRLEQIHTEFEREHGREPTDE
EAAALMGLTLEQYNQALIDASWVTVSLDGLLDRDNNEDGTAPTELPADPNEEDFTERLEK
RQLLDALTAAIKTLPEREWLIISLYYRDEMTMKEIAQILDISESRVCQLHGRALGRLRAR
LARERNP
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgcacgagcctccagcgcacccctcttcgaagaccgcgaagccgccatccgc
cagtacgcgccgctcgtgaagtacgtcgtcggccgcctcgccatcggcctccccgccatc
ctcgattacgaagacatcctctcctacggcaccatcggcctcatcgaggccctcgaccgc
ttcgacggctccaagggcgtcaagttcgaaacctacgccatctcccgcatccgcggcgcc
atcatcgatgccctccgctccctcgaccggcttccccgctccgtccgccagaaagcccgc
aggctcgagcagattcacaccgagttcgagcgcgagcacggccgcgaacccaccgacgag
gaggccgcagcgctcatgggcctcaccctcgagcagtacaaccaggccctcatcgatgcc
agctgggtgaccgtctccctcgatggcctcctcgaccgcgacaacaacgaagacggcacc
gcgccgaccgagctccccgccgatccgaacgaagaggacttcactgaacgcctcgaaaag
cgccagctcctcgatgccctcaccgccgccatcaagaccctccccgagcgcgagtggctc
atcatcagcctctactaccgcgacgaaatgaccatgaaagagatcgcccagatcctcgac
atctccgagtcgcgcgtctgccagctccacggccgcgccctcggccgcctgcgcgcccgc
ctcgcccgcgagcgcaacccctag
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integrated database retrieval system
