Tepidiforma bonchosmolovskayae: Tbon_06175
Help
Entry
Tbon_06175 CDS
T06308
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
tbh
Tepidiforma bonchosmolovskayae
Pathway
tbh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tbh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Tbon_06175 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tbh03400
]
Tbon_06175 (mutM)
Enzymes [BR:
tbh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Tbon_06175 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Tbon_06175 (mutM)
DNA repair and recombination proteins [BR:
tbh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Tbon_06175 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
DZR
Auto_anti-p27
DUF7351
Motif
Other DBs
NCBI-ProteinID:
QFG02893
LinkDB
All DBs
Position
1226267..1227127
Genome browser
AA seq
286 aa
AA seq
DB search
MPELPEVETIRRDLAPLVTGRTIVDVEVDPGTIHLLAGVPLETLRASLAGRTIRSLGRRG
KYLLFELDDGRWWAAHLRMTGRLVWRPHDAPPEPYERARVVLDDGHDLRWSDLRKFGTWR
VHASADEVVGRLGPEPIDPGLTAAQFRRVFEGRTAPVKAVLLDQRRFAGLGNIYVDEALF
AARIRPDTPAGQLSRAALGRLYRACREVLERGIAHRGASFRDYVDGQGNEGRQHMFVQVF
RRTGKPCYACGTPIERSIVGGRATHYCPRCQRPARRPQRREARRAG
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagctccccgaagtcgagaccatccgccgcgacctcgcgccgctggtcacgggg
cgcaccatcgtcgatgtcgaggtcgaccccgggacgattcacctgctcgccggggtgccg
ctcgagacgctccgggccagcctcgccgggcggacgatccggtcgctcggccggcgcggc
aagtacctcctcttcgaactggacgacggccgctggtgggccgcccacctgcggatgacc
ggccggctcgtctggcggccgcacgatgccccgcccgagccgtacgagcgcgctcgggtc
gtcctcgatgacggccacgacctgcgctggagcgacctgcggaagttcggcacgtggcgg
gtccacgcctcggccgacgaggtggtgggccggctcggcccggagccgatcgaccccggg
ctcacggcagcgcagttccgccgcgtcttcgaagggcggaccgctccggtgaaggcggtc
ctgctcgaccagcgccggttcgccgggctcggcaatatttatgtcgatgaggcgctcttc
gccgcccgcatccggccggatacgccggcgggccagctctcccgcgcggccctcggccgg
ctctaccgcgcctgccgggaggtgctggagcgggggatcgcgcaccgcggggcgagcttc
cgcgactacgtcgacgggcaggggaacgaagggcggcagcacatgttcgtgcaggtcttc
cggcggacggggaagccgtgctacgcctgcggcactccgatcgaacgaagcatcgtcggc
ggccgggccacgcactactgcccgcgctgccagcgccccgcccggcggccgcagcggagg
gaggccaggcgtgctggctga
DBGET
integrated database retrieval system
