Tepidiforma bonchosmolovskayae: Tbon_10335
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Entry
Tbon_10335 CDS
T06308
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
tbh
Tepidiforma bonchosmolovskayae
Pathway
tbh03410
Base excision repair
tbh03430
Mismatch repair
tbh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tbh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Tbon_10335 (recJ)
03430 Mismatch repair
Tbon_10335 (recJ)
03440 Homologous recombination
Tbon_10335 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tbh03400
]
Tbon_10335 (recJ)
DNA repair and recombination proteins [BR:
tbh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Tbon_10335 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Tbon_10335 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Tbon_10335 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
DUF905
SHE3
Motif
Other DBs
NCBI-ProteinID:
QFG03676
LinkDB
All DBs
Position
2050247..2051956
Genome browser
AA seq
569 aa
AA seq
DB search
MTQLVGAQPPRWRLRDPYAHQNGIPRYPPVLATVLAARGITTRQQAEAFYRPHLLPDHDP
LLLPGMADAILRVDRAIREGELIALYGDFDVDGVTSIAILHEGLAPLGARTLPYIPDRFT
EGYGLNFGAIRSLAAAGATLLVTADCGISSVAEVAYANELGLDVVILDHHTVPDVLPDAL
AAVNPKRIDSPYPFDELAACGVAYRFLEVLYDHLGVAFNDADFIDLAALGTVVDVAPLID
ENRRIVARGLEVMRTGGLRPGLAALARVSGVAPERFTSETLGFALGPRMNAAGRLAHANI
ALRLLLERDYRRAFDLASELNALNRERQRQTEEATQLAEELLGPADAPLLFVVTDQIAPG
IVGLVASRLAERRNRPAVVLSRGPEESRASARSIPGFDIVAAIRKEKELLVRHGGHRSAA
GFTVRNEHLDELRERLTATAAAQLGREPARRVIDIDAEAPLAALDGLEVKGLMKFEPTGH
GNRKPVLLSRGVRLLDAKPVGQSGDHLRLAVRDGQVTWRGIAFRQAGAELDDEVDIVYSL
QHDLSGTGVELEVLDLAPTAAARPLERGR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgacccagctcgtcggcgcccagcccccccgctggcggctccgcgacccctacgcccac
cagaacggcatcccccggtacccgcccgtcctcgccaccgtgctcgccgcccgcggcatc
accactcgccagcaggccgaggccttctaccggccccatctcctccctgaccacgacccg
ctcctcctgcccggcatggccgacgccatcctccgggtcgaccgcgccatccgcgagggc
gaactcatcgccctctacggcgacttcgacgtcgacggggtcacctccatcgccatcctc
cacgagggcctcgccccgctcggcgcccgcaccctgccctacatccccgaccggttcacc
gaaggctacggcctcaacttcggcgccatccgctccctcgccgcagccggcgccaccctc
ctcgtcaccgctgactgcggcatctcctcggtcgccgaagtcgcctacgccaacgaactc
ggcctcgacgtcgttatcctcgaccaccacaccgtcccggacgtcctccctgacgccctc
gccgccgtcaacccgaagcgcatcgattcgccctaccccttcgatgaactcgccgcctgc
ggcgtcgcctaccgcttcctcgaagtcctctacgaccacctcggcgtcgccttcaacgac
gccgacttcatcgacctcgccgccctcggcaccgtcgtcgatgtcgccccgctcatcgac
gaaaaccgccgcatcgtcgcccggggactggaggtcatgcggaccggcggcctccggccc
ggcctcgctgccctcgcccgcgtcagcggcgtggcccccgaacgcttcacctccgaaacg
ctcggcttcgccctcggcccccgcatgaacgccgccggccgcctcgcccacgcgaacatc
gccctccgcctcctcctcgaacgcgactaccgccgcgccttcgacctcgccagtgagctg
aacgccctcaatcgcgagcgccagcgccagaccgaagaggccacgcagctcgccgaagag
ctgctcggtcccgctgatgcccccttgctcttcgtcgtcaccgaccagatcgcccccggc
atcgtcgggctcgtcgcctcccgcctcgccgagcgccgcaaccgccctgcagtcgtcctc
tcgcgcggccccgaagagtcccgcgccagcgcgcgcagcatccccggcttcgatatcgtt
gccgccatccgaaaagaaaaagagctgctcgtccgccacggcggccaccgctccgctgcc
ggcttcaccgtccgcaacgaacacctcgacgaactccgcgaacgcctcactgccactgcc
gcggcccagctcggtcgcgagcccgcccgccgggtcatcgacatcgatgctgaagcgccc
ctcgcggccctcgacggactggaggtcaagggcctcatgaagttcgaaccaaccggtcac
ggcaaccggaagccggtcctcctcagccgcggcgtccgcctcctcgatgccaaacctgtc
gggcagtcgggtgaccacctccggctcgccgtccgcgacggccaggtgacctggcgcggt
atcgccttccgccaggccggcgccgaactcgacgacgaagtcgatatcgtctactcactc
cagcacgacctctccgggaccggcgtcgaacttgaggtgctcgacctcgcgcccacggcc
gccgcccggcccctcgaacgcggccgatga
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