Tepidiforma bonchosmolovskayae: Tbon_11300
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Entry
Tbon_11300 CDS
T06308
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tbh
Tepidiforma bonchosmolovskayae
Brite
KEGG Orthology (KO) [BR:
tbh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tbh03016
]
Tbon_11300 (truB)
Enzymes [BR:
tbh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Tbon_11300 (truB)
Transfer RNA biogenesis [BR:
tbh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Tbon_11300 (truB)
Prokaryotic type
Tbon_11300 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
QFG03853
LinkDB
All DBs
Position
complement(2262359..2263279)
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AA seq
306 aa
AA seq
DB search
MRSAVARKRATNGPDGILLVDKPAGWTSHDVVAKVRWLLGQPRTGHAGTLDPFATGLLVL
CLGQATRLSEYVMAHEKTYTGEIVLGIATDTADCEGAVTARRPVPPLDGATLERLARQFT
GRIAQVPPAYSAVKVAGQRAYDLARQGKAVELAARPVEVFELQLTLLAADRLRIDVRCGP
GTYIRSLARDIGEALGCGAHLASLRRLRSGRFAVDEAWSVEELERLAGMGRAGEAVLPAD
EALLEHDCALLGPSGAAAFVHGNVHRAGGALRPAPAARVYSTAGQFLGVGAVDAGGSVQP
VKVFRA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
gtgcggagcgccgtggcgaggaagcgggcgactaacggccccgacggcatcctgctggtc
gacaagccggccgggtggacgagccacgacgtggtggcgaaggtgcggtggctgctcggc
cagccgcgtaccggccatgcgggcacactggacccctttgccacggggctgctggtgctg
tgcctcgggcaggccacccggctctcggagtacgtgatggcgcacgagaagacctacacg
ggcgaaatcgtgctcggcatcgccaccgacacggcggattgcgagggggcggtgacggcg
cggcgcccggttccgcccctcgacggcgccacgctggagcggctggcgcggcagttcacc
ggcagaatcgcccaggtcccgccggcgtacagcgccgtgaaggttgccgggcagcgggca
tacgacctcgcgcggcaggggaaggcggttgagctcgcggcgcggccggtcgaggtcttc
gagctgcagctgacgctcctcgcggccgaccggctgcggatcgatgtccggtgcgggccc
gggacgtacatccggagcctcgcgcgggacatcggggaggcgctgggctgcggcgcgcac
ctggcgagcctgcggcggctgcggtcgggacggttcgccgtggacgaggcgtggtcggtc
gaggagctggagcgactggctggcatgggccgggcaggggaggccgttctcccggccgac
gaggcgctgctggagcacgactgcgcgctgctcggaccgtccggcgcggcggcgttcgtg
cacgggaacgtacaccgcgccgggggagcgctgcggccggccccggcggcgcgggtgtac
agcaccgccgggcaattccttggcgtcggcgcggtcgatgcaggcggttcggtgcagccg
gtgaaggtgtttcgggcctga
DBGET
integrated database retrieval system
