Tepidiforma bonchosmolovskayae: Tbon_11350
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Entry
Tbon_11350 CDS
T06308
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
tbh
Tepidiforma bonchosmolovskayae
Pathway
tbh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tbh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Tbon_11350 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tbh03400
]
Tbon_11350 (priA)
Enzymes [BR:
tbh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Tbon_11350 (priA)
DNA repair and recombination proteins [BR:
tbh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Tbon_11350 (priA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
HTH_24
AAA_30
AAA_19
DUF1272
DUF7130
MHC_II_beta
Glycos_transf_2
RecA_N
Zn_ribbon_LysW
Motif
Other DBs
NCBI-ProteinID:
QFG03862
UniProt:
A0ABX6C3Q5
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Position
complement(2272470..2274944)
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AA seq
824 aa
AA seq
DB search
MSDHPAHAVDPAFVPPEGTVFAEVAVHTTQPARRPFTYAVPPGMEVAPGMAVFVPFGPRI
VQGIVLRMRDRSDVEAVRPISAVMDPEPLLDPARIALAEWVCEEYLAPLWECVACCLPAG
FGQRPVTMVSPVDVPPLLPVYPKDRAILQYIAEHGRVTLDELREAVGPVSLTTLQRLQQE
GHLTVTQGLARPTGRPKFERRVALAVDPDAARAEAERLLEARPRSVEGRVLLRLAEEPDL
PLAAVRALGTTPAHLERLAERGFIRTNERRVERDPVAAVRGGQRPPPALSAEQLAAAETA
WRERVTLIHGVTGSGKTEVYLDLVGRALGAGGGAIMLVPEISLTPQAIRRFGERFGDDLA
VFHSRLSTGELYDQWFRVERGEARLVLGSRSAVFAPVRRLELVVLDEEHEWTYKQSDPVP
RYHARDVAVKLGELTGARVVLGSATPDVVTYHRSETGQIARVELATRLAPAEDGSVTEGA
LPSVQVVDMREELQAGNRSMFSRALRQAVREALAAGEQAILFVNRRGSARFVLCRDCGFL
PLCPSCEVAMSLDAEASIHAMLRCHHCGRTKRLEDRCPNCDSLRYRPFGVGTQRVEAEAR
AVFRGARVARWDSDTARTRDAHERMVAELEAGRVDIVVGTQLLAKGLDLARLTVVGVVDA
DVGLSLPDYRAAERTYQLLSQVAGRAGRRDRPGRVFIQTYEPEAPPIVAAAEHDYRGFYE
SEIAHRRRAGYPPFSRIARLVYRHHDETAGLEEASRVARELRVLRDAAGRAEPEILGPTR
PFIPRVRGEVRWQILLRGRAPGTLIGQVRLGDRWQVDIDPASLL
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgatcacccggcacacgcggtcgacccggcgttcgttcccccggaggggacggta
ttcgccgaggttgcggtccacacgacccagccggcccggaggccattcacctacgccgtg
cctccggggatggaggtcgccccggggatggcggtcttcgtgccgttcgggccgcggatc
gtgcaggggattgtcctgcggatgcgcgatcggagcgatgtcgaggcggtgcggccaatc
agcgcggtgatggaccccgagccgctcctcgacccggcccggatcgccctggcggagtgg
gtttgcgaggagtacctggcgccgctgtgggagtgcgtggcgtgctgcctgccggcaggg
ttcgggcagaggccggtgacgatggtgtctcccgtcgacgtgccgccgctgctgccggtc
tacccgaaggaccgtgcgatcttgcagtacatcgccgaacacgggcgggtgacgctggac
gaactacgggaggcggtgggcccggtttcgctgacgacgctgcagcggctgcagcaggag
ggccacctgacagtgacgcaagggctcgcccggccgaccgggcggccgaagttcgagcgg
cgggtcgccctggctgtcgacccggacgcggcgcgcgccgaggccgaacggctgctggaa
gcgcggccccggtcggttgaggggcgggtgctgctgcggctggcggaggagcccgacctg
cccctggccgccgttcgggcgctcgggacgacaccggcacaccttgagcggctggcggag
cgcggattcatccgcacgaacgagcggcgggtggagcgcgacccggttgccgccgtacgg
ggcgggcagcggccgccgccggcgctcagtgcggagcagctggccgcggcggaaacggcg
tggcgggagcgggtgacgctgatccacggggtgacgggctcggggaagaccgaggtctac
ctcgacctcgtggggcgggcgctgggggcgggcggcggcgcgatcatgctggtgccggag
atttcgctgacgccccaggcgatccggcggttcggggaacggttcggcgacgatctggcg
gtgttccattcgcggctttcgaccggcgagctgtacgaccagtggttccgggtggagcgc
ggcgaggcgcggctcgtgctcggttcgcggagcgctgtgttcgcgccggtccggaggctc
gaactggtcgtgctcgacgaggagcatgagtggacctacaagcagtcggacccggtgccg
cggtaccacgcgcgggatgttgcggtgaagctgggtgagctgactggcgcccgggtcgtc
ctcgggagcgcgacgccggatgtggtgacctaccaccggtcggagaccgggcagattgcg
cgggtcgagctggccacgcggctggcgccggccgaggacgggagcgtgaccgaaggcgcg
ctgccgtcggtgcaggtagtggacatgcgggaggagctgcaggcaggcaaccggagcatg
ttcagccgtgcgctgcggcaggccgtgcgggaggcgctggcggcgggcgagcaggcgatc
ctgttcgtgaaccggcggggatcggcgcggttcgtgctctgccgggattgcgggttcctg
ccgctctgcccgtcatgcgaggtggcgatgagcctcgacgccgaggcatcgattcatgcg
atgctgcgctgccaccactgcggccggacgaagcggcttgaggaccggtgcccgaactgc
gacagccttcgataccggccgttcggggtcgggacgcagcgcgtggaggcggaggcgcgg
gcagtgttccgcggggcgcgggtggcgcgctgggacagcgacacggcccgcacgcgggac
gcgcatgagcggatggtggccgagctggaggccgggcgggtcgatatcgtggttgggaca
cagctcctggcgaagggactcgacctcgcgcgcctgacggtcgtgggggtggtcgacgcg
gacgtcggcctgagcctcccggattaccgggcggctgagcggacatatcagctgttgagc
caggtggcgggccgggcaggccggcgagaccggccgggcagggtgttcatccagacgtat
gaacccgaggcgccaccaatcgtggcggcggcggagcatgactaccggggtttttacgaa
agcgagattgcgcaccggcggcgggcggggtacccgccgttttcgcgcatcgcgcggctg
gtctaccggcaccacgatgaaacggcggggctggaggaggcgagccgggttgcgcgggag
ctgcgggtgctgcgcgacgcggcggggcgggccgagccggagatcctggggccgacgcgg
ccgttcatcccgcgggtccggggcgaggtgcggtggcagatcctcctgcgggggcgggcg
ccgggcacgctcatcgggcaggtgcggctcggcgaccggtggcaggtcgacatcgacccg
gcaagcctgctctga
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