Tepidiforma bonchosmolovskayae: Tbon_12740
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Entry
Tbon_12740 CDS
T06308
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
tbh
Tepidiforma bonchosmolovskayae
Pathway
tbh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tbh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Tbon_12740 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbh03019
]
Tbon_12740 (rny)
Messenger RNA biogenesis [BR:
tbh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Tbon_12740 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
QFG04105
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All DBs
Position
complement(2555116..2556645)
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AA seq
509 aa
AA seq
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MLAITAIIVGLVGLLVGAAAGFLYRRRVTGTSLLQAEEQASRILAEAETRQKELLLQAKE
ETLALRNSFEAEMKERRAEISRIEQRLAQKEENLDRKLETLERREQSLRDREAQIERLRA
EAEELRQRQATELERVANLSVEEARQQLLAAVEVEIREEASRRVREMEKEVEATAAQRAR
KILATAIQRYTSEVTAETTVSVVPIPSDDMKGRIIGREGRNIRAIEAATGVDLIIDDTPD
AVTVSAFDPVRREIARQALTMLVQDGRIHPTRIEEAVNRARRDVEATMLEAAEAAAVEAG
VLNLHPEVLKIFGRLKYRTSYGQNVMRHSIETAHIAAMIAHEIGADVEVARAGGFLHDLG
KAVDHEVEGTHALIGAEIARRYKVKEAIAHCIEAHHEEVEPRTVEAIIVMMADAISGGRP
GARRESLEAYIKRLETLENIAKSYRGVESAFAIQAGREVRVIVKPEIVDDLEAMRIARDV
SQKIEETMEYPGQIKVTVVRETRATEYAR
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgctggcgataactgcgattatcgtcggcctcgtgggattgctggttggagcggcagcg
ggcttcctgtaccgccgccgcgttaccgggacatcactgctgcaggcagaggaacaggcc
agccgcatcctcgctgaggccgaaacacgacagaaggagctcctgctccaggccaaggaa
gagaccctcgcgctccggaactccttcgaggcggagatgaaggagcggcgcgccgagatt
tcgcgcatcgaacagcgcctcgcccagaaagaggagaacctcgaccggaagctcgagacg
ctcgagcggagggagcagtcgctgcgcgaccgagaggcccagattgagagactccgcgcc
gaagcggaagagctccggcagcggcaggcgaccgaactggagcgggtcgcgaacctctcg
gtcgaagaggctcggcagcaactcctcgccgctgtcgaggtagagattcgagaggaggcg
tcccgccgggtccgcgagatggagaaggaggtagaggccaccgccgcgcagcgcgcccgg
aaaatcctcgccacggccatccagcggtacacctcggaggtcaccgccgagacgaccgtc
tccgttgtccccatcccgagcgacgatatgaagggccgcatcatcggccgcgaggggcgc
aacatccgcgcaatcgaggcggcgacgggcgtcgacctgatcatcgatgacacgcccgat
gcggtgaccgtcagtgcgttcgacccggtccggcgggagattgcgcggcaggcgctgacg
atgctggtgcaggacgggcgcatccaccccacgcgcatcgaggaagcggtcaaccgggcg
cggcgcgatgtcgaggcgaccatgctggaggctgccgaggccgcggcggtcgaggccggc
gtcctcaacctccacccggaggtcctcaagattttcggccgcctgaagtaccggacaagc
tacggccagaacgtgatgcgccactccatcgagacggcgcacatcgccgccatgattgcg
cacgaaattggcgccgacgtggaagtggcgcgggccgggggcttcctccacgacctcggc
aaggccgttgaccacgaggtcgagggaacgcatgcgctcatcggcgcggaaattgcgcgg
cgctacaaggtgaaggaggcgattgcgcactgcatcgaggcccaccacgaagaggtggaa
ccgcgcacggtggaggcgatcatcgtgatgatggccgacgccatctcgggcgggcgcccg
ggggcccggcgcgaatcactcgaggcgtacatcaagcggctcgagacgctggagaacatc
gccaagagctacaggggcgttgagtccgccttcgccatccaggcggggcgcgaggtgcgc
gtcatcgtgaagcccgagatcgtggacgacctggaggcgatgcgcatcgcgcgtgacgtc
agccagaagatcgaggagacgatggagtacccgggccagatcaaggtcaccgtggtccgg
gagacgcgcgccaccgagtacgcgcggtag
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