Thermobispora bispora: Tbis_0697
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Entry
Tbis_0697 CDS
T01236
Name
(GenBank) transcriptional regulator, AraC family
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
tbi
Thermobispora bispora
Pathway
tbi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Tbis_0697
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tbi03000
]
Tbis_0697
03400 DNA repair and recombination proteins [BR:
tbi03400
]
Tbis_0697
Enzymes [BR:
tbi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Tbis_0697
Transcription factors [BR:
tbi03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Tbis_0697
DNA repair and recombination proteins [BR:
tbi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Tbis_0697
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
ADG87422
UniProt:
D6Y5S6
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All DBs
Position
complement(771196..772818)
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AA seq
540 aa
AA seq
DB search
MTGRLDFDTCYAAVSARDPRFDGRFVTAVLTTGIYCRPICPARTPARENVRFYRHAAAAE
ADGFRPCRRCRPELSPGDPGWNTRSDLVGRALRLIDEGVADELGVAGLAHRLHVSERHLH
RLFTAELGVGPLAVARTRRLLLAKRLLTETALPVTDVAFAAGFGSVRQFNAVIKESYGLT
PGELRRSARPAGRPAEPGPAGGPAALTLRLGYRRPYDAGALLRFLAARAIPGVEHVTRPA
GDGAGPRRGEADAPRYTRAIPGGSLTITPAEDHLRLTVRTADIRRLAKIVSRCRRLFDLD
ADPDAIAAVLGSTGLAPLVARRPGLRVPGAFDGFELAVRAVVGQQISVAAARTILGRIAA
RAGSPAAPADQPPDRSPDRPLGAGRAAGPDGVAPPPDGAGPPVEDPPEGGPPGGEPPECA
LLFPAADRLAGADLTGLGLTTRRIATLTALAEAVASGRIDLDGAQDPAETVALLREIPGI
GPWTASYIALRAIRDPDAWPEGDLGLVRAMRRLGIPPAEVERWRPWRAYAAVHLWHADGG
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
gtgacgggacggctcgacttcgacacgtgctacgcggcggtgtccgcgcgcgacccgcgg
ttcgacgggcgcttcgtcacggccgtcctcaccaccgggatctactgccgtccgatctgc
cccgcccgcaccccggctcgcgagaacgtgcgcttctaccggcacgccgccgcggccgag
gcggacgggttccggccgtgccgccgctgccgcccggagctcagcccgggcgacccggga
tggaacacccgctccgacctggtggggcgggcgctccggctgatcgacgagggggtcgcc
gacgagctcggcgtcgccgggctcgcccaccggctgcacgtgagcgaacggcacctgcac
cggctgttcaccgccgagctcggcgtcggtcccctcgccgtggcccggacgagacggctc
ctgctcgcgaagcggctgctcaccgagaccgccctgcccgtcaccgacgtcgccttcgcc
gcggggttcggcagcgtccgccagttcaacgcggtgatcaaagagtcgtacggcctcacc
cccggggagctgcgccggtcggcccgcccggcggggcggccggccgaaccgggaccggcg
ggcggtcccgccgcgctcaccttgcggctcggctaccgccggccctacgacgccggggcg
ctgctgcgcttcctcgccgcccgcgcgatcccgggcgtggagcacgtcacccggccggcc
ggcgacggtgccgggccccggcgcggggaggccgacgcgccgcgctacacccgggccatc
cccggcggatcgctcacgatcaccccggccgaggaccacctgcggctcaccgtgcgcacc
gcggacatccggcggctcgccaagatcgtgtcccggtgccggcggctgttcgacctcgac
gccgatcccgacgccatcgccgccgtgctcggctcgaccggcctcgcgccgctggtggcg
cggcggccggggctgcgggtgcccggcgccttcgacgggttcgagctcgcggtgcgcgcc
gtggtcggccagcagatctcggtcgccgcggcccggacgatcctcggccggatcgccgcc
cgggccgggtcaccggcggccccggcggatcagccgcccgatcgatcaccggatcggccg
ctcggggctgggcgggccgccgggccggacggtgtggcaccgccgccggacggagccggc
ccgccggtggaggacccgcccgagggcggcccgccggggggcgagccgccggagtgcgcc
ctgctcttcccggccgccgaccggctggccggggccgacctgaccgggctggggctcacc
acccgccggatcgccaccctcaccgcgctcgccgaggccgtggcgagcgggcggatcgac
ctcgacggcgcccaggacccggcggagaccgtggcgctgctccgggagatccccggcatc
ggcccgtggaccgcgagctacatcgccctgcgcgcgatccgcgaccccgacgcctggccg
gagggcgacctgggcctggtgcgggccatgcgccggctcggcattccgcccgccgaggtc
gagcgctggcggccgtggcgggcgtacgccgccgtgcacctgtggcacgcggacggcggg
tga
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